RNA–Protein interactions for RNA: ENST00000563748.5

LPCAT4-205, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 2

Gene LPCAT4, Length 1,357 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-205ENST00000563748 CHKB-CPT1BH3BT56 60 aa8.65□□□□□ -1.02
LPCAT4-205ENST00000563748 C20orf166-AS1Q96NR2 134 aa8.65□□□□□ -1.02
LPCAT4-205ENST00000563748 A8MUU9 505 aa8.64□□□□□ -1.03
LPCAT4-205ENST00000563748 IGKV2D-30A0A075B6S6 120 aa8.62□□□□□ -1.03
LPCAT4-205ENST00000563748 C9orf92A6NGG3 77 aa8.59□□□□□ -1.03
LPCAT4-205ENST00000563748 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
LPCAT4-205ENST00000563748 KRTAP9-6A0A140TA67 174 aa8.54□□□□□ -1.04
LPCAT4-205ENST00000563748 KRTAP19-2Q3LHN2 52 aa8.54□□□□□ -1.04
LPCAT4-205ENST00000563748 LCE2DQ5TA82 110 aaPredicted RBP8.54□□□□□ -1.04
LPCAT4-205ENST00000563748 A6NED7 52 aa8.53□□□□□ -1.04
LPCAT4-205ENST00000563748 CDC42SE1Q9NRR8 79 aa8.5□□□□□ -1.05
LPCAT4-205ENST00000563748 SPTSSBQ8NFR3 76 aa8.48□□□□□ -1.05
LPCAT4-205ENST00000563748 ATP11AUNQ6ZP68 121 aa8.46□□□□□ -1.06
LPCAT4-205ENST00000563748 RPL37P61927 97 aaKnown RBP8.45□□□□□ -1.06
LPCAT4-205ENST00000563748 MT1HP80294 61 aa8.45□□□□□ -1.06
LPCAT4-205ENST00000563748 A0A1B0GU69 56 aa8.44□□□□□ -1.06
LPCAT4-205ENST00000563748 LCA10Q71F78 164 aa8.4□□□□□ -1.06
LPCAT4-205ENST00000563748 SPINK7P58062 85 aa8.38□□□□□ -1.07
LPCAT4-205ENST00000563748 SEC61GP60059 68 aa8.33□□□□□ -1.08
LPCAT4-205ENST00000563748 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
LPCAT4-205ENST00000563748 UQCR11O14957 56 aa8.31□□□□□ -1.08
LPCAT4-205ENST00000563748 PMAIP1Q13794 54 aa8.31□□□□□ -1.08
LPCAT4-205ENST00000563748 KRTAP10-6P60371 365 aaPredicted RBP8.3□□□□□ -1.08
LPCAT4-205ENST00000563748 COX6B2Q6YFQ2 88 aa8.3□□□□□ -1.08
LPCAT4-205ENST00000563748 CRCT1Q9UGL9 99 aa8.3□□□□□ -1.08
LPCAT4-205ENST00000563748 SPATA8Q6RVD6 105 aa8.27□□□□□ -1.09
LPCAT4-205ENST00000563748 A8MU10 97 aa8.26□□□□□ -1.09
LPCAT4-205ENST00000563748 FLGP20930 4061 aaPredicted RBP8.25□□□□□ -1.09
LPCAT4-205ENST00000563748 M0R2T5 61 aa8.24□□□□□ -1.09
LPCAT4-205ENST00000563748 KRTAP3-1Q9BYR8 98 aa8.23□□□□□ -1.09
LPCAT4-205ENST00000563748 A6NN06 94 aa8.21□□□□□ -1.1
LPCAT4-205ENST00000563748 MIR22HGQ0VDD5 57 aa8.21□□□□□ -1.1
LPCAT4-205ENST00000563748 FSIP2Q5CZC0 6907 aa8.19□□□□□ -1.1
LPCAT4-205ENST00000563748 KTN1-AS1Q86SY8 53 aa8.16□□□□□ -1.1
LPCAT4-205ENST00000563748 A0A1B0GU33 70 aa8.04□□□□□ -1.12
LPCAT4-205ENST00000563748 H1FX-AS1Q4G0G2 97 aa8.02□□□□□ -1.13
LPCAT4-205ENST00000563748 S4R3F8 94 aa7.99□□□□□ -1.13
LPCAT4-205ENST00000563748 KRTAP9-8Q9BYQ0 159 aa7.98□□□□□ -1.13
LPCAT4-205ENST00000563748 H0YAA0 97 aa7.93□□□□□ -1.14
LPCAT4-205ENST00000563748 KRTAP3-3Q9BYR6 98 aa7.93□□□□□ -1.14
LPCAT4-205ENST00000563748 RBM12B-AS1Q9P1G2 102 aa7.93□□□□□ -1.14
LPCAT4-205ENST00000563748 KRTAP3-2Q9BYR7 98 aa7.9□□□□□ -1.14
LPCAT4-205ENST00000563748 K7ERS5 55 aa7.85□□□□□ -1.15
LPCAT4-205ENST00000563748 MT2AP02795 61 aa7.85□□□□□ -1.15
LPCAT4-205ENST00000563748 USH2AO75445 5202 aa7.82□□□□□ -1.16
LPCAT4-205ENST00000563748 MT1FP04733 61 aa7.79□□□□□ -1.16
LPCAT4-205ENST00000563748 CSAG1Q6PB30 78 aa7.79□□□□□ -1.16
LPCAT4-205ENST00000563748 SSPOA2VEC9 5147 aa7.76□□□□□ -1.17
LPCAT4-205ENST00000563748 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.73□□□□□ -1.17
LPCAT4-205ENST00000563748 KRTAP9-3Q9BYQ3 159 aa7.73□□□□□ -1.17
LPCAT4-205ENST00000563748 LCE2BO14633 110 aa7.72□□□□□ -1.17
LPCAT4-205ENST00000563748 KRTAP10-10P60014 251 aa7.72□□□□□ -1.17
LPCAT4-205ENST00000563748 KRTAP9-7A8MTY7 169 aa7.66□□□□□ -1.18
LPCAT4-205ENST00000563748 M0QZ58 72 aa7.65□□□□□ -1.18
LPCAT4-205ENST00000563748 ADM2Q7Z4H4 148 aa7.65□□□□□ -1.18
LPCAT4-205ENST00000563748 FCGBPQ9Y6R7 5405 aaPredicted RBP7.64□□□□□ -1.19
LPCAT4-205ENST00000563748 KRTAP19-1Q8IUB9 90 aa7.64□□□□□ -1.19
LPCAT4-205ENST00000563748 P0C880 135 aa7.62□□□□□ -1.19
LPCAT4-205ENST00000563748 PRAC1Q96KF2 57 aa7.62□□□□□ -1.19
LPCAT4-205ENST00000563748 KRTAP13-4Q3LI77 160 aa7.6□□□□□ -1.19
LPCAT4-205ENST00000563748 ROMO1P60602 79 aa7.53□□□□□ -1.2
LPCAT4-205ENST00000563748 A0A0D9SG42 100 aa7.5□□□□□ -1.21
LPCAT4-205ENST00000563748 KRTAP19-6Q3LI70 58 aa7.49□□□□□ -1.21
LPCAT4-205ENST00000563748 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
LPCAT4-205ENST00000563748 KRTAP25-1Q3LHN0 102 aa7.46□□□□□ -1.21
LPCAT4-205ENST00000563748 KRTAP12-1P59990 96 aa7.42□□□□□ -1.22
LPCAT4-205ENST00000563748 R4GN34 69 aa7.38□□□□□ -1.23
LPCAT4-205ENST00000563748 KRTAP12-2P59991 146 aa7.37□□□□□ -1.23
LPCAT4-205ENST00000563748 MACF1Q9UPN3 7388 aaKnown RBP7.34□□□□□ -1.23
LPCAT4-205ENST00000563748 SPINT4Q6UDR6 99 aa7.33□□□□□ -1.24
LPCAT4-205ENST00000563748 CRIPTQ9P021 101 aa7.27□□□□□ -1.25
LPCAT4-205ENST00000563748 SYNE2Q8WXH0 6885 aaKnown RBP7.23□□□□□ -1.25
LPCAT4-205ENST00000563748 KRTAP6-3Q3LI67 103 aa7.19□□□□□ -1.26
LPCAT4-205ENST00000563748 MT1BP07438 61 aa7.12□□□□□ -1.27
LPCAT4-205ENST00000563748 SPRR2GQ9BYE4 73 aa7.11□□□□□ -1.27
LPCAT4-205ENST00000563748 KRTAP19-8Q3LI54 63 aa7.09□□□□□ -1.27
LPCAT4-205ENST00000563748 C10orf95Q9H7T3 257 aa6.99□□□□□ -1.29
LPCAT4-205ENST00000563748 KRTAP10-5P60370 271 aa6.98□□□□□ -1.29
LPCAT4-205ENST00000563748 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
LPCAT4-205ENST00000563748 PP632Q6XCG6 107 aa6.92□□□□□ -1.3
LPCAT4-205ENST00000563748 NEBP20929 6669 aa6.87□□□□□ -1.31
LPCAT4-205ENST00000563748 MUC12Q9UKN1 5478 aa6.83□□□□□ -1.32
LPCAT4-205ENST00000563748 KRTAP5-9P26371 169 aa6.82□□□□□ -1.32
LPCAT4-205ENST00000563748 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
LPCAT4-205ENST00000563748 PLAC4Q8WY50 150 aa6.79□□□□□ -1.32
LPCAT4-205ENST00000563748 TNP1P09430 55 aa6.76□□□□□ -1.33
LPCAT4-205ENST00000563748 KMT2DO14686 5537 aa6.72□□□□□ -1.33
LPCAT4-205ENST00000563748 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.33
LPCAT4-205ENST00000563748 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.33
LPCAT4-205ENST00000563748 MDN1Q9NU22 5596 aa6.66□□□□□ -1.34
LPCAT4-205ENST00000563748 MT1XP80297 61 aa6.65□□□□□ -1.35
LPCAT4-205ENST00000563748 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.35
LPCAT4-205ENST00000563748 SPRR2FQ96RM1 72 aa6.56□□□□□ -1.36
LPCAT4-205ENST00000563748 KRTAP2-3P0C7H8 128 aa6.51□□□□□ -1.37
LPCAT4-205ENST00000563748 KRTAP2-4Q9BYR9 128 aa6.51□□□□□ -1.37
LPCAT4-205ENST00000563748 SPRR2EP22531 72 aa6.5□□□□□ -1.37
LPCAT4-205ENST00000563748 SPRR2BP35325 72 aa6.5□□□□□ -1.37
LPCAT4-205ENST00000563748 SPRR2AP35326 72 aa6.5□□□□□ -1.37
LPCAT4-205ENST00000563748 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
LPCAT4-205ENST00000563748 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms