RNA–Protein interactions for RNA: ENST00000562297.5

PKD1-225, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 2,040 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-225ENST00000562297 J3QL48 77 aa8.69□□□□□ -1.02
PKD1-225ENST00000562297 LCA10Q71F78 164 aa8.69□□□□□ -1.02
PKD1-225ENST00000562297 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
PKD1-225ENST00000562297 SPTSSBQ8NFR3 76 aa8.67□□□□□ -1.02
PKD1-225ENST00000562297 KTN1-AS1Q86SY8 53 aa8.66□□□□□ -1.02
PKD1-225ENST00000562297 KRTAP3-1Q9BYR8 98 aa8.62□□□□□ -1.03
PKD1-225ENST00000562297 A6NN06 94 aa8.59□□□□□ -1.03
PKD1-225ENST00000562297 HERC1Q15751 4861 aa8.58□□□□□ -1.04
PKD1-225ENST00000562297 COX6B2Q6YFQ2 88 aa8.54□□□□□ -1.04
PKD1-225ENST00000562297 A0A1B0GU69 56 aa8.49□□□□□ -1.05
PKD1-225ENST00000562297 HMCN2Q8NDA2 5059 aa8.47□□□□□ -1.05
PKD1-225ENST00000562297 RBM12B-AS1Q9P1G2 102 aa8.47□□□□□ -1.05
PKD1-225ENST00000562297 MUC17Q685J3 4493 aa8.46□□□□□ -1.05
PKD1-225ENST00000562297 SEC61BP60468 96 aaKnown RBP8.4□□□□□ -1.06
PKD1-225ENST00000562297 KRTAP4-1Q9BYQ7 146 aa8.32□□□□□ -1.08
PKD1-225ENST00000562297 KRTAP3-3Q9BYR6 98 aa8.3□□□□□ -1.08
PKD1-225ENST00000562297 SPATA8Q6RVD6 105 aa8.29□□□□□ -1.08
PKD1-225ENST00000562297 UQCR11O14957 56 aa8.28□□□□□ -1.08
PKD1-225ENST00000562297 H1FX-AS1Q4G0G2 97 aa8.28□□□□□ -1.08
PKD1-225ENST00000562297 MIR22HGQ0VDD5 57 aa8.27□□□□□ -1.09
PKD1-225ENST00000562297 S4R3F8 94 aa8.25□□□□□ -1.09
PKD1-225ENST00000562297 MUC2Q02817 5179 aa8.24□□□□□ -1.09
PKD1-225ENST00000562297 KRTAP19-2Q3LHN2 52 aa8.15□□□□□ -1.1
PKD1-225ENST00000562297 PRAC1Q96KF2 57 aa8.13□□□□□ -1.11
PKD1-225ENST00000562297 H0YAA0 97 aa8.09□□□□□ -1.11
PKD1-225ENST00000562297 A0A1B0GU33 70 aa8.08□□□□□ -1.12
PKD1-225ENST00000562297 ADM2Q7Z4H4 148 aa8.08□□□□□ -1.12
PKD1-225ENST00000562297 FLGP20930 4061 aaPredicted RBP8.08□□□□□ -1.12
PKD1-225ENST00000562297 UBR4Q5T4S7 5183 aa8.05□□□□□ -1.12
PKD1-225ENST00000562297 KRTAP3-2Q9BYR7 98 aa8.05□□□□□ -1.12
PKD1-225ENST00000562297 KRTAP10-6P60371 365 aaPredicted RBP8.04□□□□□ -1.12
PKD1-225ENST00000562297 LINC01554Q52M75 96 aa8.04□□□□□ -1.12
PKD1-225ENST00000562297 CSAG1Q6PB30 78 aa8.04□□□□□ -1.12
PKD1-225ENST00000562297 RNF213Q63HN8 5207 aa8.01□□□□□ -1.13
PKD1-225ENST00000562297 P0C880 135 aa7.95□□□□□ -1.14
PKD1-225ENST00000562297 FAT4Q6V0I7 4981 aa7.92□□□□□ -1.14
PKD1-225ENST00000562297 LCE2CQ5TA81 110 aa7.88□□□□□ -1.15
PKD1-225ENST00000562297 KRTAP13-4Q3LI77 160 aa7.86□□□□□ -1.15
PKD1-225ENST00000562297 A0A0D9SG42 100 aa7.76□□□□□ -1.17
PKD1-225ENST00000562297 KRTAP25-1Q3LHN0 102 aa7.73□□□□□ -1.17
PKD1-225ENST00000562297 K7ERS5 55 aa7.73□□□□□ -1.17
PKD1-225ENST00000562297 M0QZ58 72 aa7.69□□□□□ -1.18
PKD1-225ENST00000562297 LORP23490 312 aaPredicted RBP7.68□□□□□ -1.18
PKD1-225ENST00000562297 MT1HP80294 61 aa7.68□□□□□ -1.18
PKD1-225ENST00000562297 R4GN34 69 aa7.6□□□□□ -1.19
PKD1-225ENST00000562297 KRTAP12-2P59991 146 aa7.56□□□□□ -1.2
PKD1-225ENST00000562297 ROMO1P60602 79 aa7.56□□□□□ -1.2
PKD1-225ENST00000562297 CRIPTQ9P021 101 aa7.54□□□□□ -1.2
PKD1-225ENST00000562297 M0R2T5 61 aa7.54□□□□□ -1.2
PKD1-225ENST00000562297 KRTAP12-1P59990 96 aa7.54□□□□□ -1.2
PKD1-225ENST00000562297 H3BS24 57 aa7.52□□□□□ -1.21
PKD1-225ENST00000562297 SPINT4Q6UDR6 99 aa7.51□□□□□ -1.21
PKD1-225ENST00000562297 KRTAP9-8Q9BYQ0 159 aa7.44□□□□□ -1.22
PKD1-225ENST00000562297 MT2AP02795 61 aa7.41□□□□□ -1.22
PKD1-225ENST00000562297 MT1FP04733 61 aa7.39□□□□□ -1.23
PKD1-225ENST00000562297 SPRR2GQ9BYE4 73 aa7.34□□□□□ -1.23
PKD1-225ENST00000562297 KRTAP19-1Q8IUB9 90 aa7.33□□□□□ -1.24
PKD1-225ENST00000562297 KRTAP10-10P60014 251 aa7.31□□□□□ -1.24
PKD1-225ENST00000562297 C10orf95Q9H7T3 257 aa7.31□□□□□ -1.24
PKD1-225ENST00000562297 LCE2AQ5TA79 106 aaPredicted RBP7.29□□□□□ -1.24
PKD1-225ENST00000562297 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
PKD1-225ENST00000562297 KRTAP19-8Q3LI54 63 aa7.12□□□□□ -1.27
PKD1-225ENST00000562297 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
PKD1-225ENST00000562297 KRTAP15-1Q3LI76 137 aa7.07□□□□□ -1.28
PKD1-225ENST00000562297 PLAC4Q8WY50 150 aa7.05□□□□□ -1.28
PKD1-225ENST00000562297 MT1BP07438 61 aa7.04□□□□□ -1.28
PKD1-225ENST00000562297 NDUFAF8A1L188 74 aa6.94□□□□□ -1.3
PKD1-225ENST00000562297 LCE2BO14633 110 aa6.94□□□□□ -1.3
PKD1-225ENST00000562297 MT1XP80297 61 aa6.84□□□□□ -1.31
PKD1-225ENST00000562297 KRTAP10-5P60370 271 aa6.83□□□□□ -1.32
PKD1-225ENST00000562297 KRTAP9-2Q9BYQ4 174 aa6.83□□□□□ -1.32
PKD1-225ENST00000562297 USH2AO75445 5202 aa6.83□□□□□ -1.32
PKD1-225ENST00000562297 TNP1P09430 55 aa6.81□□□□□ -1.32
PKD1-225ENST00000562297 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.32
PKD1-225ENST00000562297 FSIP2Q5CZC0 6907 aa6.75□□□□□ -1.33
PKD1-225ENST00000562297 PP632Q6XCG6 107 aa6.72□□□□□ -1.33
PKD1-225ENST00000562297 KRTAP23-1A1A580 65 aa6.67□□□□□ -1.34
PKD1-225ENST00000562297 PRO2289Q9P1D8 64 aa6.65□□□□□ -1.35
PKD1-225ENST00000562297 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
PKD1-225ENST00000562297 KRTAP10-7P60409 375 aaPredicted RBP6.58□□□□□ -1.36
PKD1-225ENST00000562297 LCE3AQ5TA76 89 aa6.55□□□□□ -1.36
PKD1-225ENST00000562297 KRTAP10-12P60413 245 aa6.5□□□□□ -1.37
PKD1-225ENST00000562297 CRCT1Q9UGL9 99 aa6.5□□□□□ -1.37
PKD1-225ENST00000562297 LUZP6Q538Z0 58 aa6.49□□□□□ -1.37
PKD1-225ENST00000562297 KRTAP9-6A0A140TA67 174 aa6.48□□□□□ -1.37
PKD1-225ENST00000562297 KRTAP19-6Q3LI70 58 aa6.44□□□□□ -1.38
PKD1-225ENST00000562297 KRTAP8-1Q8IUC2 63 aa6.43□□□□□ -1.38
PKD1-225ENST00000562297 KMT2DO14686 5537 aa6.42□□□□□ -1.38
PKD1-225ENST00000562297 A0A0A0MQY5 61 aa6.3□□□□□ -1.4
PKD1-225ENST00000562297 KRTAP4-8A0A0G2JLE6 195 aa6.3□□□□□ -1.4
PKD1-225ENST00000562297 KRTAP4-8Q9BYQ9 185 aa6.3□□□□□ -1.4
PKD1-225ENST00000562297 KRTAP12-3P60328 96 aa6.27□□□□□ -1.41
PKD1-225ENST00000562297 FCGBPQ9Y6R7 5405 aaPredicted RBP6.27□□□□□ -1.41
PKD1-225ENST00000562297 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.41
PKD1-225ENST00000562297 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
PKD1-225ENST00000562297 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
PKD1-225ENST00000562297 MACF1Q9UPN3 7388 aaKnown RBP6.07□□□□□ -1.44
PKD1-225ENST00000562297 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.04□□□□□ -1.44
PKD1-225ENST00000562297 SYNE2Q8WXH0 6885 aaKnown RBP5.99□□□□□ -1.45
PKD1-225ENST00000562297 MT1EP04732 61 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms