RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 DMAC1Q96GE9 116 aa11.34□□□□□ -0.59
SYNGR3-202ENST00000562045 A8MUN3 132 aa11.32□□□□□ -0.6
SYNGR3-202ENST00000562045 KRTAP3-1Q9BYR8 98 aa11.27□□□□□ -0.61
SYNGR3-202ENST00000562045 ACYP2P14621 99 aa11.25□□□□□ -0.61
SYNGR3-202ENST00000562045 Q1T7F1 81 aa11.22□□□□□ -0.61
SYNGR3-202ENST00000562045 H1FX-AS1Q4G0G2 97 aa11.16□□□□□ -0.62
SYNGR3-202ENST00000562045 BRK1Q8WUW1 75 aa11.13□□□□□ -0.63
SYNGR3-202ENST00000562045 COA5Q86WW8 74 aa11.12□□□□□ -0.63
SYNGR3-202ENST00000562045 M0R2T5 61 aa11.09□□□□□ -0.63
SYNGR3-202ENST00000562045 CHKB-CPT1BH3BT56 60 aa11.07□□□□□ -0.64
SYNGR3-202ENST00000562045 V9GYY9 64 aa11.07□□□□□ -0.64
SYNGR3-202ENST00000562045 KRTAP10-6P60371 365 aaPredicted RBP11.04□□□□□ -0.64
SYNGR3-202ENST00000562045 S4R3F8 94 aa11.04□□□□□ -0.64
SYNGR3-202ENST00000562045 LORP23490 312 aaPredicted RBP11.02□□□□□ -0.65
SYNGR3-202ENST00000562045 LCA10Q71F78 164 aa10.98□□□□□ -0.65
SYNGR3-202ENST00000562045 SPTSSBQ8NFR3 76 aa10.92□□□□□ -0.66
SYNGR3-202ENST00000562045 KRTAP3-3Q9BYR6 98 aa10.9□□□□□ -0.66
SYNGR3-202ENST00000562045 Q5VV11 94 aa10.85□□□□□ -0.67
SYNGR3-202ENST00000562045 PSPHP1O15172 72 aa10.84□□□□□ -0.67
SYNGR3-202ENST00000562045 CSAG1Q6PB30 78 aa10.82□□□□□ -0.68
SYNGR3-202ENST00000562045 KRTAP9-8Q9BYQ0 159 aa10.81□□□□□ -0.68
SYNGR3-202ENST00000562045 KRTAP9-2Q9BYQ4 174 aa10.81□□□□□ -0.68
SYNGR3-202ENST00000562045 PMAIP1Q13794 54 aa10.72□□□□□ -0.69
SYNGR3-202ENST00000562045 MT2AP02795 61 aa10.7□□□□□ -0.7
SYNGR3-202ENST00000562045 LCE2DQ5TA82 110 aaPredicted RBP10.7□□□□□ -0.7
SYNGR3-202ENST00000562045 PRR15LQ9BU68 103 aa10.69□□□□□ -0.7
SYNGR3-202ENST00000562045 LINC01558Q9Y6Z2 57 aa10.67□□□□□ -0.7
SYNGR3-202ENST00000562045 MT1FP04733 61 aa10.64□□□□□ -0.71
SYNGR3-202ENST00000562045 SEC61GP60059 68 aa10.58□□□□□ -0.72
SYNGR3-202ENST00000562045 H0YAA0 97 aa10.57□□□□□ -0.72
SYNGR3-202ENST00000562045 CDC42SE1Q9NRR8 79 aa10.57□□□□□ -0.72
SYNGR3-202ENST00000562045 FSIP2Q5CZC0 6907 aa10.55□□□□□ -0.72
SYNGR3-202ENST00000562045 A0A1B0GU69 56 aa10.55□□□□□ -0.72
SYNGR3-202ENST00000562045 A8MU10 97 aa10.55□□□□□ -0.72
SYNGR3-202ENST00000562045 KRTAP10-10P60014 251 aa10.53□□□□□ -0.72
SYNGR3-202ENST00000562045 A6NED7 52 aa10.52□□□□□ -0.73
SYNGR3-202ENST00000562045 ADM2Q7Z4H4 148 aa10.5□□□□□ -0.73
SYNGR3-202ENST00000562045 KTN1-AS1Q86SY8 53 aa10.49□□□□□ -0.73
SYNGR3-202ENST00000562045 A6NN06 94 aa10.47□□□□□ -0.73
SYNGR3-202ENST00000562045 KRTAP9-3Q9BYQ3 159 aa10.45□□□□□ -0.74
SYNGR3-202ENST00000562045 KRTAP3-2Q9BYR7 98 aa10.45□□□□□ -0.74
SYNGR3-202ENST00000562045 P0C880 135 aa10.39□□□□□ -0.75
SYNGR3-202ENST00000562045 USH2AO75445 5202 aa10.38□□□□□ -0.75
SYNGR3-202ENST00000562045 LCE2BO14633 110 aa10.34□□□□□ -0.75
SYNGR3-202ENST00000562045 A0A1B0GU33 70 aa10.28□□□□□ -0.76
SYNGR3-202ENST00000562045 KRTAP9-6A0A140TA67 174 aa10.27□□□□□ -0.77
SYNGR3-202ENST00000562045 CRCT1Q9UGL9 99 aa10.26□□□□□ -0.77
SYNGR3-202ENST00000562045 CRIPTQ9P021 101 aa10.21□□□□□ -0.78
SYNGR3-202ENST00000562045 UQCR11O14957 56 aa10.2□□□□□ -0.78
SYNGR3-202ENST00000562045 SSPOA2VEC9 5147 aa10.2□□□□□ -0.78
SYNGR3-202ENST00000562045 R4GN34 69 aa10.18□□□□□ -0.78
SYNGR3-202ENST00000562045 M0QZ58 72 aa10.16□□□□□ -0.78
SYNGR3-202ENST00000562045 SPATA8Q6RVD6 105 aa10.13□□□□□ -0.79
SYNGR3-202ENST00000562045 KRTAP19-1Q8IUB9 90 aa10.13□□□□□ -0.79
SYNGR3-202ENST00000562045 KRTAP13-4Q3LI77 160 aa10.1□□□□□ -0.79
SYNGR3-202ENST00000562045 MIR22HGQ0VDD5 57 aa10.04□□□□□ -0.8
SYNGR3-202ENST00000562045 SPRR2GQ9BYE4 73 aa10.01□□□□□ -0.81
SYNGR3-202ENST00000562045 LINC01554Q52M75 96 aa9.95□□□□□ -0.82
SYNGR3-202ENST00000562045 A0A0D9SG42 100 aa9.92□□□□□ -0.82
SYNGR3-202ENST00000562045 MT1BP07438 61 aa9.87□□□□□ -0.83
SYNGR3-202ENST00000562045 KRTAP19-8Q3LI54 63 aa9.87□□□□□ -0.83
SYNGR3-202ENST00000562045 FCGBPQ9Y6R7 5405 aaPredicted RBP9.87□□□□□ -0.83
SYNGR3-202ENST00000562045 KRTAP19-6Q3LI70 58 aa9.83□□□□□ -0.84
SYNGR3-202ENST00000562045 PRAC1Q96KF2 57 aa9.79□□□□□ -0.84
SYNGR3-202ENST00000562045 KRTAP12-1P59990 96 aa9.73□□□□□ -0.85
SYNGR3-202ENST00000562045 SPINT4Q6UDR6 99 aa9.71□□□□□ -0.85
SYNGR3-202ENST00000562045 KRTAP12-2P59991 146 aa9.68□□□□□ -0.86
SYNGR3-202ENST00000562045 K7ERS5 55 aa9.68□□□□□ -0.86
SYNGR3-202ENST00000562045 PLAC4Q8WY50 150 aa9.65□□□□□ -0.87
SYNGR3-202ENST00000562045 MACF1Q9UPN3 7388 aaKnown RBP9.56□□□□□ -0.88
SYNGR3-202ENST00000562045 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.56□□□□□ -0.88
SYNGR3-202ENST00000562045 KRTAP10-5P60370 271 aa9.51□□□□□ -0.89
SYNGR3-202ENST00000562045 CAMK2N1Q7Z7J9 78 aa9.51□□□□□ -0.89
SYNGR3-202ENST00000562045 SYNE2Q8WXH0 6885 aaKnown RBP9.41□□□□□ -0.9
SYNGR3-202ENST00000562045 KRTAP25-1Q3LHN0 102 aa9.38□□□□□ -0.91
SYNGR3-202ENST00000562045 MT1XP80297 61 aa9.36□□□□□ -0.91
SYNGR3-202ENST00000562045 KRTAP9-7A8MTY7 169 aa9.29□□□□□ -0.92
SYNGR3-202ENST00000562045 PRO2289Q9P1D8 64 aa9.28□□□□□ -0.92
SYNGR3-202ENST00000562045 ROMO1P60602 79 aa9.2□□□□□ -0.94
SYNGR3-202ENST00000562045 C10orf95Q9H7T3 257 aa9.2□□□□□ -0.94
SYNGR3-202ENST00000562045 KMT2DO14686 5537 aa9.09□□□□□ -0.95
SYNGR3-202ENST00000562045 KRTAP6-3Q3LI67 103 aa9.02□□□□□ -0.96
SYNGR3-202ENST00000562045 TNP1P09430 55 aa9.01□□□□□ -0.97
SYNGR3-202ENST00000562045 KRTAP10-7P60409 375 aaPredicted RBP8.97□□□□□ -0.97
SYNGR3-202ENST00000562045 H3BS24 57 aa8.97□□□□□ -0.97
SYNGR3-202ENST00000562045 KRTAP4-8A0A0G2JLE6 195 aa8.86□□□□□ -0.99
SYNGR3-202ENST00000562045 KRTAP4-8Q9BYQ9 185 aa8.86□□□□□ -0.99
SYNGR3-202ENST00000562045 KRTAP10-12P60413 245 aa8.85□□□□□ -0.99
SYNGR3-202ENST00000562045 MUC12Q9UKN1 5478 aa8.85□□□□□ -0.99
SYNGR3-202ENST00000562045 KRTAP5-9P26371 169 aa8.82□□□□□ -1
SYNGR3-202ENST00000562045 KRTAP8-1Q8IUC2 63 aa8.76□□□□□ -1.01
SYNGR3-202ENST00000562045 NEBP20929 6669 aa8.71□□□□□ -1.01
SYNGR3-202ENST00000562045 KRTAP23-1A1A580 65 aa8.68□□□□□ -1.02
SYNGR3-202ENST00000562045 SPRR2FQ96RM1 72 aa8.67□□□□□ -1.02
SYNGR3-202ENST00000562045 MDN1Q9NU22 5596 aa8.67□□□□□ -1.02
SYNGR3-202ENST00000562045 LCE3AQ5TA76 89 aa8.63□□□□□ -1.03
SYNGR3-202ENST00000562045 PP632Q6XCG6 107 aa8.63□□□□□ -1.03
SYNGR3-202ENST00000562045 KRTAP15-1Q3LI76 137 aa8.61□□□□□ -1.03
SYNGR3-202ENST00000562045 SPRR2EP22531 72 aa8.43□□□□□ -1.06
SYNGR3-202ENST00000562045 SPRR2BP35325 72 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 2370.7 ms