RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 C7orf65Q6ZTY9 151 aa5.02□□□□□ -1.61
HERC1-212ENST00000561348 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
HERC1-212ENST00000561348 TMEM258P61165 79 aa4.97□□□□□ -1.61
HERC1-212ENST00000561348 C4orf26Q17RF5 130 aa4.97□□□□□ -1.61
HERC1-212ENST00000561348 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
HERC1-212ENST00000561348 TP53AIP1Q9HCN2 124 aa4.95□□□□□ -1.62
HERC1-212ENST00000561348 H1FX-AS1Q4G0G2 97 aa4.94□□□□□ -1.62
HERC1-212ENST00000561348 CYSTM1Q9H1C7 97 aa4.94□□□□□ -1.62
HERC1-212ENST00000561348 KRTAP10-10P60014 251 aa4.93□□□□□ -1.62
HERC1-212ENST00000561348 KLKP1Q107X0 134 aa4.93□□□□□ -1.62
HERC1-212ENST00000561348 KRTAP9-8Q9BYQ0 159 aa4.93□□□□□ -1.62
HERC1-212ENST00000561348 KRTAP9-3Q9BYQ3 159 aa4.92□□□□□ -1.62
HERC1-212ENST00000561348 OCR1Q9BZK8 76 aa4.92□□□□□ -1.62
HERC1-212ENST00000561348 NDUFC1O43677 76 aa4.91□□□□□ -1.62
HERC1-212ENST00000561348 MT2AP02795 61 aa4.91□□□□□ -1.62
HERC1-212ENST00000561348 RPS28P62857 69 aaKnown RBP4.9□□□□□ -1.63
HERC1-212ENST00000561348 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
HERC1-212ENST00000561348 FSIP2Q5CZC0 6907 aa4.88□□□□□ -1.63
HERC1-212ENST00000561348 H7BZZ5 65 aa4.88□□□□□ -1.63
HERC1-212ENST00000561348 C1orf64Q8NEQ6 169 aa4.88□□□□□ -1.63
HERC1-212ENST00000561348 SNURFQ9Y675 71 aa4.88□□□□□ -1.63
HERC1-212ENST00000561348 TRAV22A0A0B4J277 110 aa4.87□□□□□ -1.63
HERC1-212ENST00000561348 MT1FP04733 61 aa4.87□□□□□ -1.63
HERC1-212ENST00000561348 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
HERC1-212ENST00000561348 ATP5EP56381 51 aaPredicted RBP4.86□□□□□ -1.63
HERC1-212ENST00000561348 H0Y9P7 68 aa4.85□□□□□ -1.63
HERC1-212ENST00000561348 C5orf47Q569G3 176 aa4.85□□□□□ -1.63
HERC1-212ENST00000561348 LCE5AQ5TCM9 118 aa4.85□□□□□ -1.63
HERC1-212ENST00000561348 CYP4F30PQ9H0H9 118 aa4.84□□□□□ -1.63
HERC1-212ENST00000561348 S4R3F8 94 aa4.83□□□□□ -1.64
HERC1-212ENST00000561348 LOC101927531A0A1B0GV80 90 aa4.82□□□□□ -1.64
HERC1-212ENST00000561348 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
HERC1-212ENST00000561348 SERP1Q9Y6X1 66 aa4.82□□□□□ -1.64
HERC1-212ENST00000561348 MP68P56378 58 aa4.8□□□□□ -1.64
HERC1-212ENST00000561348 LINC00208Q96KT6 92 aa4.8□□□□□ -1.64
HERC1-212ENST00000561348 H3BPC8 53 aa4.79□□□□□ -1.64
HERC1-212ENST00000561348 CSAG1Q6PB30 78 aa4.77□□□□□ -1.65
HERC1-212ENST00000561348 LCA10Q71F78 164 aa4.77□□□□□ -1.65
HERC1-212ENST00000561348 SMIM26A0A096LP01 95 aa4.73□□□□□ -1.65
HERC1-212ENST00000561348 USH2AO75445 5202 aa4.71□□□□□ -1.66
HERC1-212ENST00000561348 SPANXA2-OT1Q8N9U9 137 aa4.69□□□□□ -1.66
HERC1-212ENST00000561348 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
HERC1-212ENST00000561348 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
HERC1-212ENST00000561348 A8MUN3 132 aa4.63□□□□□ -1.67
HERC1-212ENST00000561348 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
HERC1-212ENST00000561348 SEC61GP60059 68 aa4.62□□□□□ -1.67
HERC1-212ENST00000561348 KRTAP15-1Q3LI76 137 aa4.62□□□□□ -1.67
HERC1-212ENST00000561348 Q1T7F1 81 aa4.57□□□□□ -1.68
HERC1-212ENST00000561348 ADM2Q7Z4H4 148 aa4.57□□□□□ -1.68
HERC1-212ENST00000561348 V9GYY9 64 aa4.57□□□□□ -1.68
HERC1-212ENST00000561348 Q5VV11 94 aa4.55□□□□□ -1.68
HERC1-212ENST00000561348 COA5Q86WW8 74 aa4.55□□□□□ -1.68
HERC1-212ENST00000561348 DMAC1Q96GE9 116 aa4.54□□□□□ -1.68
HERC1-212ENST00000561348 KRTAP19-6Q3LI70 58 aa4.53□□□□□ -1.68
HERC1-212ENST00000561348 FCGBPQ9Y6R7 5405 aaPredicted RBP4.52□□□□□ -1.69
HERC1-212ENST00000561348 ACYP2P14621 99 aa4.51□□□□□ -1.69
HERC1-212ENST00000561348 SPRR2GQ9BYE4 73 aa4.51□□□□□ -1.69
HERC1-212ENST00000561348 CHKB-CPT1BH3BT56 60 aa4.5□□□□□ -1.69
HERC1-212ENST00000561348 CRIPTQ9P021 101 aa4.5□□□□□ -1.69
HERC1-212ENST00000561348 H0YAA0 97 aa4.48□□□□□ -1.69
HERC1-212ENST00000561348 A6NN06 94 aa4.47□□□□□ -1.69
HERC1-212ENST00000561348 MT1BP07438 61 aa4.47□□□□□ -1.69
HERC1-212ENST00000561348 PSPHP1O15172 72 aa4.46□□□□□ -1.7
HERC1-212ENST00000561348 PRO0628Q9UI54 55 aa4.46□□□□□ -1.7
HERC1-212ENST00000561348 P0C880 135 aa4.45□□□□□ -1.7
HERC1-212ENST00000561348 KRTAP19-8Q3LI54 63 aa4.45□□□□□ -1.7
HERC1-212ENST00000561348 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
HERC1-212ENST00000561348 SPTSSBQ8NFR3 76 aa4.44□□□□□ -1.7
HERC1-212ENST00000561348 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
HERC1-212ENST00000561348 R4GN34 69 aa4.44□□□□□ -1.7
HERC1-212ENST00000561348 PRR15LQ9BU68 103 aa4.43□□□□□ -1.7
HERC1-212ENST00000561348 M0QZ58 72 aa4.42□□□□□ -1.7
HERC1-212ENST00000561348 LINC01554Q52M75 96 aa4.42□□□□□ -1.7
HERC1-212ENST00000561348 PLAC4Q8WY50 150 aa4.38□□□□□ -1.71
HERC1-212ENST00000561348 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
HERC1-212ENST00000561348 A6NED7 52 aa4.34□□□□□ -1.71
HERC1-212ENST00000561348 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.71
HERC1-212ENST00000561348 A0A1B0GU69 56 aa4.31□□□□□ -1.72
HERC1-212ENST00000561348 CDC42SE1Q9NRR8 79 aa4.3□□□□□ -1.72
HERC1-212ENST00000561348 SYNE2Q8WXH0 6885 aaKnown RBP4.3□□□□□ -1.72
HERC1-212ENST00000561348 PRO2289Q9P1D8 64 aa4.28□□□□□ -1.72
HERC1-212ENST00000561348 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
HERC1-212ENST00000561348 A8MU10 97 aa4.24□□□□□ -1.73
HERC1-212ENST00000561348 A0A0A0MQY5 61 aa4.22□□□□□ -1.73
HERC1-212ENST00000561348 MT1XP80297 61 aa4.22□□□□□ -1.73
HERC1-212ENST00000561348 UQCR11O14957 56 aa4.21□□□□□ -1.74
HERC1-212ENST00000561348 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
HERC1-212ENST00000561348 SPATA8Q6RVD6 105 aa4.2□□□□□ -1.74
HERC1-212ENST00000561348 A0A0D9SG42 100 aa4.18□□□□□ -1.74
HERC1-212ENST00000561348 MIR22HGQ0VDD5 57 aa4.18□□□□□ -1.74
HERC1-212ENST00000561348 KRTAP13-4Q3LI77 160 aa4.18□□□□□ -1.74
HERC1-212ENST00000561348 CAMK2N1Q7Z7J9 78 aa4.14□□□□□ -1.75
HERC1-212ENST00000561348 A0A1B0GU33 70 aa4.13□□□□□ -1.75
HERC1-212ENST00000561348 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
HERC1-212ENST00000561348 SPINT4Q6UDR6 99 aa4.1□□□□□ -1.75
HERC1-212ENST00000561348 KRTAP8-1Q8IUC2 63 aa4.1□□□□□ -1.75
HERC1-212ENST00000561348 SPRR2FQ96RM1 72 aa4.09□□□□□ -1.75
HERC1-212ENST00000561348 KMT2DO14686 5537 aa4.08□□□□□ -1.76
HERC1-212ENST00000561348 KRTAP10-7P60409 375 aaPredicted RBP4.07□□□□□ -1.76
HERC1-212ENST00000561348 KRTAP12-2P59991 146 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms