RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 FAM236AA0A1B0GUQ0 79 aa5.14□□□□□ -1.59
LRRC28-221ENST00000561276 FAM236BA0A1B0GV22 79 aa5.14□□□□□ -1.59
LRRC28-221ENST00000561276 ATOX1O00244 68 aa5.14□□□□□ -1.59
LRRC28-221ENST00000561276 C5orf47Q569G3 176 aa5.14□□□□□ -1.59
LRRC28-221ENST00000561276 LOC101927531A0A1B0GV80 90 aa5.13□□□□□ -1.59
LRRC28-221ENST00000561276 C4orf26Q17RF5 130 aa5.13□□□□□ -1.59
LRRC28-221ENST00000561276 FAT4Q6V0I7 4981 aa5.12□□□□□ -1.59
LRRC28-221ENST00000561276 MP68P56378 58 aa5.12□□□□□ -1.59
LRRC28-221ENST00000561276 C1orf64Q8NEQ6 169 aa5.12□□□□□ -1.59
LRRC28-221ENST00000561276 LINC00208Q96KT6 92 aa5.12□□□□□ -1.59
LRRC28-221ENST00000561276 M0R2T5 61 aa5.1□□□□□ -1.59
LRRC28-221ENST00000561276 SMIM20Q8N5G0 67 aa5.09□□□□□ -1.59
LRRC28-221ENST00000561276 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.59
LRRC28-221ENST00000561276 TRAV7A0A075B6U4 112 aa5.08□□□□□ -1.6
LRRC28-221ENST00000561276 H1FX-AS1Q4G0G2 97 aa5.08□□□□□ -1.6
LRRC28-221ENST00000561276 H3BPC8 53 aa5.07□□□□□ -1.6
LRRC28-221ENST00000561276 KLKP1Q107X0 134 aa5.05□□□□□ -1.6
LRRC28-221ENST00000561276 KRTAP10-6P60371 365 aaPredicted RBP5.02□□□□□ -1.61
LRRC28-221ENST00000561276 SERP2Q8N6R1 65 aa5.01□□□□□ -1.61
LRRC28-221ENST00000561276 FLGP20930 4061 aaPredicted RBP4.99□□□□□ -1.61
LRRC28-221ENST00000561276 SNURFQ9Y675 71 aa4.96□□□□□ -1.62
LRRC28-221ENST00000561276 C20orf197Q8N268 126 aa4.95□□□□□ -1.62
LRRC28-221ENST00000561276 S4R3F8 94 aa4.95□□□□□ -1.62
LRRC28-221ENST00000561276 LCA10Q71F78 164 aa4.94□□□□□ -1.62
LRRC28-221ENST00000561276 A8MUN3 132 aa4.93□□□□□ -1.62
LRRC28-221ENST00000561276 COX7CP15954 63 aa4.93□□□□□ -1.62
LRRC28-221ENST00000561276 CSAG1Q6PB30 78 aa4.9□□□□□ -1.63
LRRC28-221ENST00000561276 ANAPC13Q9BS18 74 aa4.89□□□□□ -1.63
LRRC28-221ENST00000561276 MT2AP02795 61 aa4.88□□□□□ -1.63
LRRC28-221ENST00000561276 DMAC1Q96GE9 116 aa4.88□□□□□ -1.63
LRRC28-221ENST00000561276 NDUFC1O43677 76 aa4.86□□□□□ -1.63
LRRC28-221ENST00000561276 ACYP2P14621 99 aa4.85□□□□□ -1.63
LRRC28-221ENST00000561276 KRTAP10-10P60014 251 aa4.85□□□□□ -1.63
LRRC28-221ENST00000561276 MT1FP04733 61 aa4.84□□□□□ -1.63
LRRC28-221ENST00000561276 SPANXA2-OT1Q8N9U9 137 aa4.83□□□□□ -1.64
LRRC28-221ENST00000561276 KRTAP15-1Q3LI76 137 aa4.82□□□□□ -1.64
LRRC28-221ENST00000561276 CYSTM1Q9H1C7 97 aa4.81□□□□□ -1.64
LRRC28-221ENST00000561276 CCDC179H3BU77 68 aa4.79□□□□□ -1.64
LRRC28-221ENST00000561276 H7BZZ5 65 aa4.79□□□□□ -1.64
LRRC28-221ENST00000561276 CHKB-CPT1BH3BT56 60 aa4.74□□□□□ -1.65
LRRC28-221ENST00000561276 H0YAA0 97 aa4.72□□□□□ -1.65
LRRC28-221ENST00000561276 SPTSSBQ8NFR3 76 aa4.72□□□□□ -1.65
LRRC28-221ENST00000561276 ADM2Q7Z4H4 148 aa4.7□□□□□ -1.66
LRRC28-221ENST00000561276 COA5Q86WW8 74 aa4.69□□□□□ -1.66
LRRC28-221ENST00000561276 CRIPTQ9P021 101 aa4.64□□□□□ -1.67
LRRC28-221ENST00000561276 P0C880 135 aa4.62□□□□□ -1.67
LRRC28-221ENST00000561276 ATP5EP56381 51 aaPredicted RBP4.62□□□□□ -1.67
LRRC28-221ENST00000561276 SPRR2GQ9BYE4 73 aa4.62□□□□□ -1.67
LRRC28-221ENST00000561276 TMEM258P61165 79 aa4.6□□□□□ -1.67
LRRC28-221ENST00000561276 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
LRRC28-221ENST00000561276 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
LRRC28-221ENST00000561276 PCP4P48539 62 aa4.56□□□□□ -1.68
LRRC28-221ENST00000561276 R4GN34 69 aa4.56□□□□□ -1.68
LRRC28-221ENST00000561276 KRTAP19-8Q3LI54 63 aa4.55□□□□□ -1.68
LRRC28-221ENST00000561276 M0QZ58 72 aa4.53□□□□□ -1.68
LRRC28-221ENST00000561276 Q5VV11 94 aa4.53□□□□□ -1.68
LRRC28-221ENST00000561276 MT1BP07438 61 aa4.52□□□□□ -1.69
LRRC28-221ENST00000561276 SEC61GP60059 68 aa4.52□□□□□ -1.69
LRRC28-221ENST00000561276 SERP1Q9Y6X1 66 aa4.52□□□□□ -1.69
LRRC28-221ENST00000561276 USH2AO75445 5202 aa4.5□□□□□ -1.69
LRRC28-221ENST00000561276 KRTAP19-6Q3LI70 58 aa4.47□□□□□ -1.69
LRRC28-221ENST00000561276 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
LRRC28-221ENST00000561276 A0A1B0GU69 56 aa4.46□□□□□ -1.7
LRRC28-221ENST00000561276 LINC01554Q52M75 96 aa4.46□□□□□ -1.7
LRRC28-221ENST00000561276 A0A1B0GU33 70 aa4.43□□□□□ -1.7
LRRC28-221ENST00000561276 KRTAP13-4Q3LI77 160 aa4.42□□□□□ -1.7
LRRC28-221ENST00000561276 PLAC4Q8WY50 150 aa4.42□□□□□ -1.7
LRRC28-221ENST00000561276 LINC01558Q9Y6Z2 57 aa4.42□□□□□ -1.7
LRRC28-221ENST00000561276 SSPOA2VEC9 5147 aa4.39□□□□□ -1.71
LRRC28-221ENST00000561276 PRR15LQ9BU68 103 aa4.39□□□□□ -1.71
LRRC28-221ENST00000561276 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
LRRC28-221ENST00000561276 A6NN06 94 aa4.36□□□□□ -1.71
LRRC28-221ENST00000561276 KRTAP10-5P60370 271 aa4.36□□□□□ -1.71
LRRC28-221ENST00000561276 RPS28P62857 69 aaKnown RBP4.33□□□□□ -1.72
LRRC28-221ENST00000561276 A0A0D9SG42 100 aa4.32□□□□□ -1.72
LRRC28-221ENST00000561276 SMIM26A0A096LP01 95 aa4.31□□□□□ -1.72
LRRC28-221ENST00000561276 Q1T7F1 81 aa4.31□□□□□ -1.72
LRRC28-221ENST00000561276 V9GYY9 64 aa4.31□□□□□ -1.72
LRRC28-221ENST00000561276 MT1XP80297 61 aa4.3□□□□□ -1.72
LRRC28-221ENST00000561276 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
LRRC28-221ENST00000561276 FCGBPQ9Y6R7 5405 aaPredicted RBP4.29□□□□□ -1.72
LRRC28-221ENST00000561276 A8MU10 97 aa4.26□□□□□ -1.73
LRRC28-221ENST00000561276 UQCR11O14957 56 aa4.26□□□□□ -1.73
LRRC28-221ENST00000561276 PSPHP1O15172 72 aa4.26□□□□□ -1.73
LRRC28-221ENST00000561276 SPINT4Q6UDR6 99 aa4.25□□□□□ -1.73
LRRC28-221ENST00000561276 KRTAP12-1P59990 96 aa4.24□□□□□ -1.73
LRRC28-221ENST00000561276 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
LRRC28-221ENST00000561276 KRTAP12-2P59991 146 aa4.21□□□□□ -1.74
LRRC28-221ENST00000561276 MIR22HGQ0VDD5 57 aa4.19□□□□□ -1.74
LRRC28-221ENST00000561276 MACF1Q9UPN3 7388 aaKnown RBP4.15□□□□□ -1.74
LRRC28-221ENST00000561276 A6NED7 52 aa4.13□□□□□ -1.75
LRRC28-221ENST00000561276 KRTAP10-7P60409 375 aaPredicted RBP4.12□□□□□ -1.75
LRRC28-221ENST00000561276 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
LRRC28-221ENST00000561276 KRTAP10-12P60413 245 aa4.08□□□□□ -1.76
LRRC28-221ENST00000561276 KRTAP6-3Q3LI67 103 aa4.07□□□□□ -1.76
LRRC28-221ENST00000561276 K7ERS5 55 aa4.05□□□□□ -1.76
LRRC28-221ENST00000561276 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
LRRC28-221ENST00000561276 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
LRRC28-221ENST00000561276 KRTAP8-1Q8IUC2 63 aa4.02□□□□□ -1.77
LRRC28-221ENST00000561276 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms