RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 PRR15LQ9BU68 103 aa8.55□□□□□ -1.04
HDDC3-206ENST00000561036 PSPHP1O15172 72 aa8.53□□□□□ -1.04
HDDC3-206ENST00000561036 LCA10Q71F78 164 aa8.52□□□□□ -1.05
HDDC3-206ENST00000561036 HERC1Q15751 4861 aa8.5□□□□□ -1.05
HDDC3-206ENST00000561036 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
HDDC3-206ENST00000561036 HMCN2Q8NDA2 5059 aa8.49□□□□□ -1.05
HDDC3-206ENST00000561036 Q5VV11 94 aa8.48□□□□□ -1.05
HDDC3-206ENST00000561036 A0A1B0GU69 56 aa8.47□□□□□ -1.05
HDDC3-206ENST00000561036 SEC61GP60059 68 aa8.45□□□□□ -1.06
HDDC3-206ENST00000561036 KRTAP19-2Q3LHN2 52 aa8.43□□□□□ -1.06
HDDC3-206ENST00000561036 CSAG1Q6PB30 78 aa8.39□□□□□ -1.07
HDDC3-206ENST00000561036 A6NED7 52 aa8.31□□□□□ -1.08
HDDC3-206ENST00000561036 H0YAA0 97 aa8.25□□□□□ -1.09
HDDC3-206ENST00000561036 UQCR11O14957 56 aa8.25□□□□□ -1.09
HDDC3-206ENST00000561036 BRK1Q8WUW1 75 aa8.24□□□□□ -1.09
HDDC3-206ENST00000561036 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
HDDC3-206ENST00000561036 A0A1B0GU33 70 aa8.21□□□□□ -1.1
HDDC3-206ENST00000561036 KRTAP10-6P60371 365 aaPredicted RBP8.21□□□□□ -1.1
HDDC3-206ENST00000561036 LCE2CQ5TA81 110 aa8.2□□□□□ -1.1
HDDC3-206ENST00000561036 CDC42SE1Q9NRR8 79 aa8.19□□□□□ -1.1
HDDC3-206ENST00000561036 ADM2Q7Z4H4 148 aa8.18□□□□□ -1.1
HDDC3-206ENST00000561036 SPATA8Q6RVD6 105 aa8.17□□□□□ -1.1
HDDC3-206ENST00000561036 MIR22HGQ0VDD5 57 aa8.15□□□□□ -1.1
HDDC3-206ENST00000561036 PRO0628Q9UI54 55 aa8.13□□□□□ -1.11
HDDC3-206ENST00000561036 P0C880 135 aa8.12□□□□□ -1.11
HDDC3-206ENST00000561036 FLGP20930 4061 aaPredicted RBP8.1□□□□□ -1.11
HDDC3-206ENST00000561036 MUC2Q02817 5179 aa8.07□□□□□ -1.12
HDDC3-206ENST00000561036 A8MU10 97 aa8.04□□□□□ -1.12
HDDC3-206ENST00000561036 MT1HP80294 61 aa8.03□□□□□ -1.12
HDDC3-206ENST00000561036 M0QZ58 72 aa8.01□□□□□ -1.13
HDDC3-206ENST00000561036 RNF213Q63HN8 5207 aa7.98□□□□□ -1.13
HDDC3-206ENST00000561036 UBR4Q5T4S7 5183 aa7.98□□□□□ -1.13
HDDC3-206ENST00000561036 M0R2T5 61 aa7.96□□□□□ -1.14
HDDC3-206ENST00000561036 KRTAP13-4Q3LI77 160 aa7.96□□□□□ -1.14
HDDC3-206ENST00000561036 CRIPTQ9P021 101 aa7.89□□□□□ -1.15
HDDC3-206ENST00000561036 R4GN34 69 aa7.89□□□□□ -1.15
HDDC3-206ENST00000561036 LORP23490 312 aaPredicted RBP7.83□□□□□ -1.16
HDDC3-206ENST00000561036 A0A0D9SG42 100 aa7.82□□□□□ -1.16
HDDC3-206ENST00000561036 K7ERS5 55 aa7.82□□□□□ -1.16
HDDC3-206ENST00000561036 PMAIP1Q13794 54 aa7.81□□□□□ -1.16
HDDC3-206ENST00000561036 FAT4Q6V0I7 4981 aa7.79□□□□□ -1.16
HDDC3-206ENST00000561036 A6NN06 94 aa7.77□□□□□ -1.17
HDDC3-206ENST00000561036 KRTAP9-8Q9BYQ0 159 aa7.75□□□□□ -1.17
HDDC3-206ENST00000561036 MT2AP02795 61 aa7.74□□□□□ -1.17
HDDC3-206ENST00000561036 KRTAP12-1P59990 96 aa7.7□□□□□ -1.18
HDDC3-206ENST00000561036 LINC01554Q52M75 96 aa7.7□□□□□ -1.18
HDDC3-206ENST00000561036 KRTAP10-10P60014 251 aa7.68□□□□□ -1.18
HDDC3-206ENST00000561036 LCE2AQ5TA79 106 aaPredicted RBP7.68□□□□□ -1.18
HDDC3-206ENST00000561036 MT1FP04733 61 aa7.67□□□□□ -1.18
HDDC3-206ENST00000561036 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
HDDC3-206ENST00000561036 SPRR2GQ9BYE4 73 aa7.66□□□□□ -1.18
HDDC3-206ENST00000561036 SPINT4Q6UDR6 99 aa7.64□□□□□ -1.19
HDDC3-206ENST00000561036 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
HDDC3-206ENST00000561036 SVIPQ8NHG7 77 aa7.57□□□□□ -1.2
HDDC3-206ENST00000561036 KTN1-AS1Q86SY8 53 aa7.52□□□□□ -1.21
HDDC3-206ENST00000561036 ROMO1P60602 79 aa7.48□□□□□ -1.21
HDDC3-206ENST00000561036 KRTAP9-3Q9BYQ3 159 aa7.48□□□□□ -1.21
HDDC3-206ENST00000561036 KRTAP19-8Q3LI54 63 aa7.45□□□□□ -1.22
HDDC3-206ENST00000561036 PLAC4Q8WY50 150 aa7.42□□□□□ -1.22
HDDC3-206ENST00000561036 CAMK2N1Q7Z7J9 78 aa7.4□□□□□ -1.22
HDDC3-206ENST00000561036 MT1BP07438 61 aa7.3□□□□□ -1.24
HDDC3-206ENST00000561036 C10orf95Q9H7T3 257 aa7.28□□□□□ -1.24
HDDC3-206ENST00000561036 PRAC1Q96KF2 57 aa7.25□□□□□ -1.25
HDDC3-206ENST00000561036 LCE2BO14633 110 aa7.22□□□□□ -1.25
HDDC3-206ENST00000561036 KRTAP9-2Q9BYQ4 174 aa7.18□□□□□ -1.26
HDDC3-206ENST00000561036 KRTAP25-1Q3LHN0 102 aa7.17□□□□□ -1.26
HDDC3-206ENST00000561036 TNP1P09430 55 aa7.08□□□□□ -1.28
HDDC3-206ENST00000561036 MT1XP80297 61 aa7.08□□□□□ -1.28
HDDC3-206ENST00000561036 KRTAP10-5P60370 271 aa7.07□□□□□ -1.28
HDDC3-206ENST00000561036 PRO2289Q9P1D8 64 aa7.06□□□□□ -1.28
HDDC3-206ENST00000561036 KRTAP9-6A0A140TA67 174 aa7.01□□□□□ -1.29
HDDC3-206ENST00000561036 LCE2DQ5TA82 110 aaPredicted RBP7□□□□□ -1.29
HDDC3-206ENST00000561036 KRTAP23-1A1A580 65 aa6.96□□□□□ -1.3
HDDC3-206ENST00000561036 PP632Q6XCG6 107 aa6.96□□□□□ -1.3
HDDC3-206ENST00000561036 KRTAP19-6Q3LI70 58 aa6.82□□□□□ -1.32
HDDC3-206ENST00000561036 USH2AO75445 5202 aa6.79□□□□□ -1.32
HDDC3-206ENST00000561036 KRTAP10-7P60409 375 aaPredicted RBP6.76□□□□□ -1.33
HDDC3-206ENST00000561036 FSIP2Q5CZC0 6907 aa6.76□□□□□ -1.33
HDDC3-206ENST00000561036 KRTAP10-12P60413 245 aa6.75□□□□□ -1.33
HDDC3-206ENST00000561036 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
HDDC3-206ENST00000561036 CRCT1Q9UGL9 99 aa6.72□□□□□ -1.33
HDDC3-206ENST00000561036 KRTAP8-1Q8IUC2 63 aa6.64□□□□□ -1.35
HDDC3-206ENST00000561036 SSPOA2VEC9 5147 aa6.63□□□□□ -1.35
HDDC3-206ENST00000561036 KRTAP12-3P60328 96 aa6.48□□□□□ -1.37
HDDC3-206ENST00000561036 KRTAP4-8A0A0G2JLE6 195 aa6.45□□□□□ -1.38
HDDC3-206ENST00000561036 KRTAP4-8Q9BYQ9 185 aa6.45□□□□□ -1.38
HDDC3-206ENST00000561036 KRTAP19-5Q3LI72 72 aa6.4□□□□□ -1.38
HDDC3-206ENST00000561036 KRTAP15-1Q3LI76 137 aa6.38□□□□□ -1.39
HDDC3-206ENST00000561036 KRTAP19-7Q3SYF9 63 aa6.31□□□□□ -1.4
HDDC3-206ENST00000561036 FCGBPQ9Y6R7 5405 aaPredicted RBP6.31□□□□□ -1.4
HDDC3-206ENST00000561036 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.29□□□□□ -1.4
HDDC3-206ENST00000561036 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
HDDC3-206ENST00000561036 MT1EP04732 61 aa6.21□□□□□ -1.42
HDDC3-206ENST00000561036 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
HDDC3-206ENST00000561036 KMT2DO14686 5537 aa6.17□□□□□ -1.42
HDDC3-206ENST00000561036 SPRR5A0A1B0GTR4 108 aa6.16□□□□□ -1.42
HDDC3-206ENST00000561036 MT1LQ93083 61 aa6.1□□□□□ -1.43
HDDC3-206ENST00000561036 LCE3CQ5T5A8 94 aa6.06□□□□□ -1.44
HDDC3-206ENST00000561036 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
HDDC3-206ENST00000561036 MACF1Q9UPN3 7388 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms