RNA–Protein interactions for RNA: ENST00000560504.1

PIF1-209, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 2

Gene PIF1, Length 1,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-209ENST00000560504 KRTAP3-3Q9BYR6 98 aa10.17□□□□□ -0.78
PIF1-209ENST00000560504 A8MUN3 132 aa10.15□□□□□ -0.78
PIF1-209ENST00000560504 SMIM20Q8N5G0 67 aa10.14□□□□□ -0.79
PIF1-209ENST00000560504 USH2AO75445 5202 aa10.12□□□□□ -0.79
PIF1-209ENST00000560504 TRAV7A0A075B6U4 112 aa10.11□□□□□ -0.79
PIF1-209ENST00000560504 NDUFC1O43677 76 aa10.06□□□□□ -0.8
PIF1-209ENST00000560504 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.03□□□□□ -0.8
PIF1-209ENST00000560504 SSPOA2VEC9 5147 aa10□□□□□ -0.81
PIF1-209ENST00000560504 KRTAP9-7A8MTY7 169 aa9.97□□□□□ -0.81
PIF1-209ENST00000560504 DMAC1Q96GE9 116 aa9.96□□□□□ -0.82
PIF1-209ENST00000560504 KRTAP19-1Q8IUB9 90 aa9.91□□□□□ -0.82
PIF1-209ENST00000560504 SERP2Q8N6R1 65 aa9.88□□□□□ -0.83
PIF1-209ENST00000560504 SNURFQ9Y675 71 aa9.88□□□□□ -0.83
PIF1-209ENST00000560504 H0YAA0 97 aa9.87□□□□□ -0.83
PIF1-209ENST00000560504 SPRR2GQ9BYE4 73 aa9.83□□□□□ -0.84
PIF1-209ENST00000560504 C20orf197Q8N268 126 aa9.82□□□□□ -0.84
PIF1-209ENST00000560504 FCGBPQ9Y6R7 5405 aaPredicted RBP9.81□□□□□ -0.84
PIF1-209ENST00000560504 ACYP2P14621 99 aa9.81□□□□□ -0.84
PIF1-209ENST00000560504 CRIPTQ9P021 101 aa9.8□□□□□ -0.84
PIF1-209ENST00000560504 KRTAP19-6Q3LI70 58 aa9.79□□□□□ -0.84
PIF1-209ENST00000560504 ADM2Q7Z4H4 148 aa9.79□□□□□ -0.84
PIF1-209ENST00000560504 KRTAP19-8Q3LI54 63 aa9.71□□□□□ -0.86
PIF1-209ENST00000560504 Q5VV11 94 aa9.71□□□□□ -0.86
PIF1-209ENST00000560504 SPANXA2-OT1Q8N9U9 137 aa9.69□□□□□ -0.86
PIF1-209ENST00000560504 MT1BP07438 61 aa9.68□□□□□ -0.86
PIF1-209ENST00000560504 COX7CP15954 63 aa9.66□□□□□ -0.86
PIF1-209ENST00000560504 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
PIF1-209ENST00000560504 SPTSSBQ8NFR3 76 aa9.63□□□□□ -0.87
PIF1-209ENST00000560504 P0C880 135 aa9.6□□□□□ -0.87
PIF1-209ENST00000560504 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
PIF1-209ENST00000560504 MACF1Q9UPN3 7388 aaKnown RBP9.54□□□□□ -0.88
PIF1-209ENST00000560504 R4GN34 69 aa9.51□□□□□ -0.89
PIF1-209ENST00000560504 ANAPC13Q9BS18 74 aa9.49□□□□□ -0.89
PIF1-209ENST00000560504 SYNE2Q8WXH0 6885 aaKnown RBP9.48□□□□□ -0.89
PIF1-209ENST00000560504 A6NN06 94 aa9.47□□□□□ -0.89
PIF1-209ENST00000560504 M0QZ58 72 aa9.46□□□□□ -0.9
PIF1-209ENST00000560504 CYSTM1Q9H1C7 97 aa9.45□□□□□ -0.9
PIF1-209ENST00000560504 H7BZZ5 65 aa9.44□□□□□ -0.9
PIF1-209ENST00000560504 COA5Q86WW8 74 aa9.42□□□□□ -0.9
PIF1-209ENST00000560504 KRTAP10-5P60370 271 aa9.39□□□□□ -0.91
PIF1-209ENST00000560504 PLAC4Q8WY50 150 aa9.33□□□□□ -0.92
PIF1-209ENST00000560504 LINC01554Q52M75 96 aa9.32□□□□□ -0.92
PIF1-209ENST00000560504 KRTAP6-3Q3LI67 103 aa9.3□□□□□ -0.92
PIF1-209ENST00000560504 CCDC179H3BU77 68 aa9.28□□□□□ -0.92
PIF1-209ENST00000560504 PRO2289Q9P1D8 64 aa9.18□□□□□ -0.94
PIF1-209ENST00000560504 SEC61GP60059 68 aa9.16□□□□□ -0.94
PIF1-209ENST00000560504 MT1XP80297 61 aa9.15□□□□□ -0.94
PIF1-209ENST00000560504 SERP1Q9Y6X1 66 aa9.13□□□□□ -0.95
PIF1-209ENST00000560504 KRTAP13-4Q3LI77 160 aa9.09□□□□□ -0.95
PIF1-209ENST00000560504 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
PIF1-209ENST00000560504 A0A1B0GU33 70 aa8.96□□□□□ -0.98
PIF1-209ENST00000560504 NEBP20929 6669 aa8.95□□□□□ -0.98
PIF1-209ENST00000560504 A0A1B0GU69 56 aa8.94□□□□□ -0.98
PIF1-209ENST00000560504 TMEM258P61165 79 aa8.94□□□□□ -0.98
PIF1-209ENST00000560504 SPATA8Q6RVD6 105 aa8.91□□□□□ -0.98
PIF1-209ENST00000560504 MUC12Q9UKN1 5478 aa8.9□□□□□ -0.98
PIF1-209ENST00000560504 A0A0D9SG42 100 aa8.87□□□□□ -0.99
PIF1-209ENST00000560504 KRTAP12-2P59991 146 aa8.86□□□□□ -0.99
PIF1-209ENST00000560504 CAMK2N1Q7Z7J9 78 aa8.81□□□□□ -1
PIF1-209ENST00000560504 KRTAP5-9P26371 169 aa8.79□□□□□ -1
PIF1-209ENST00000560504 PRR15LQ9BU68 103 aa8.76□□□□□ -1.01
PIF1-209ENST00000560504 KRTAP10-7P60409 375 aaPredicted RBP8.75□□□□□ -1.01
PIF1-209ENST00000560504 LINC01558Q9Y6Z2 57 aa8.74□□□□□ -1.01
PIF1-209ENST00000560504 KRTAP20-1Q3LI63 56 aa8.73□□□□□ -1.01
PIF1-209ENST00000560504 SPINT4Q6UDR6 99 aa8.73□□□□□ -1.01
PIF1-209ENST00000560504 KMT2DO14686 5537 aa8.72□□□□□ -1.01
PIF1-209ENST00000560504 SMIM26A0A096LP01 95 aa8.71□□□□□ -1.02
PIF1-209ENST00000560504 KRTAP8-1Q8IUC2 63 aa8.7□□□□□ -1.02
PIF1-209ENST00000560504 KRTAP10-12P60413 245 aa8.69□□□□□ -1.02
PIF1-209ENST00000560504 KRTAP12-1P59990 96 aa8.68□□□□□ -1.02
PIF1-209ENST00000560504 KRTAP4-8A0A0G2JLE6 195 aa8.67□□□□□ -1.02
PIF1-209ENST00000560504 KRTAP4-8Q9BYQ9 185 aa8.67□□□□□ -1.02
PIF1-209ENST00000560504 A8MU10 97 aa8.64□□□□□ -1.03
PIF1-209ENST00000560504 SPRR2FQ96RM1 72 aa8.62□□□□□ -1.03
PIF1-209ENST00000560504 MDN1Q9NU22 5596 aa8.6□□□□□ -1.03
PIF1-209ENST00000560504 UQCR11O14957 56 aa8.47□□□□□ -1.05
PIF1-209ENST00000560504 KRTAP2-3P0C7H8 128 aa8.44□□□□□ -1.06
PIF1-209ENST00000560504 KRTAP2-4Q9BYR9 128 aa8.44□□□□□ -1.06
PIF1-209ENST00000560504 SPRR2EP22531 72 aa8.43□□□□□ -1.06
PIF1-209ENST00000560504 SPRR2BP35325 72 aa8.43□□□□□ -1.06
PIF1-209ENST00000560504 SPRR2AP35326 72 aa8.43□□□□□ -1.06
PIF1-209ENST00000560504 PCP4P48539 62 aa8.43□□□□□ -1.06
PIF1-209ENST00000560504 V9GYY9 64 aa8.42□□□□□ -1.06
PIF1-209ENST00000560504 Q1T7F1 81 aa8.37□□□□□ -1.07
PIF1-209ENST00000560504 LCE1AQ5T7P2 110 aa8.35□□□□□ -1.07
PIF1-209ENST00000560504 PSPHP1O15172 72 aa8.34□□□□□ -1.07
PIF1-209ENST00000560504 MIR22HGQ0VDD5 57 aa8.32□□□□□ -1.08
PIF1-209ENST00000560504 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.09
PIF1-209ENST00000560504 RPS28P62857 69 aaKnown RBP8.21□□□□□ -1.1
PIF1-209ENST00000560504 TNP1P09430 55 aa8.2□□□□□ -1.1
PIF1-209ENST00000560504 KRTAP19-7Q3SYF9 63 aa8.17□□□□□ -1.1
PIF1-209ENST00000560504 KRTAP2-2Q9BYT5 123 aa8.16□□□□□ -1.1
PIF1-209ENST00000560504 KRTAP2-1Q9BYU5 128 aa8.16□□□□□ -1.1
PIF1-209ENST00000560504 SPRR2DP22532 72 aa8.14□□□□□ -1.11
PIF1-209ENST00000560504 K7ERS5 55 aa8.11□□□□□ -1.11
PIF1-209ENST00000560504 MT1EP04732 61 aa8.09□□□□□ -1.11
PIF1-209ENST00000560504 A6NED7 52 aa8.07□□□□□ -1.12
PIF1-209ENST00000560504 KRTAP19-5Q3LI72 72 aa8.07□□□□□ -1.12
PIF1-209ENST00000560504 LCE3AQ5TA76 89 aa8.04□□□□□ -1.12
PIF1-209ENST00000560504 KRTAP19-3Q7Z4W3 81 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms