RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 KRTAP3-2Q9BYR7 98 aa7□□□□□ -1.29
SMAD3-214ENST00000560402 SMIM26A0A096LP01 95 aa6.98□□□□□ -1.29
SMAD3-214ENST00000560402 C7orf65Q6ZTY9 151 aa6.97□□□□□ -1.29
SMAD3-214ENST00000560402 IGKV2D-30A0A075B6S6 120 aa6.96□□□□□ -1.3
SMAD3-214ENST00000560402 HRES1P13985 223 aa6.91□□□□□ -1.3
SMAD3-214ENST00000560402 ACYP2P14621 99 aa6.9□□□□□ -1.3
SMAD3-214ENST00000560402 COA5Q86WW8 74 aa6.88□□□□□ -1.31
SMAD3-214ENST00000560402 KRTAP9-8Q9BYQ0 159 aa6.88□□□□□ -1.31
SMAD3-214ENST00000560402 USH2AO75445 5202 aa6.87□□□□□ -1.31
SMAD3-214ENST00000560402 DMAC1Q96GE9 116 aa6.86□□□□□ -1.31
SMAD3-214ENST00000560402 V9GYY9 64 aa6.86□□□□□ -1.31
SMAD3-214ENST00000560402 SSPOA2VEC9 5147 aa6.84□□□□□ -1.31
SMAD3-214ENST00000560402 CHKB-CPT1BH3BT56 60 aa6.84□□□□□ -1.31
SMAD3-214ENST00000560402 A8MUN3 132 aa6.83□□□□□ -1.32
SMAD3-214ENST00000560402 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.81□□□□□ -1.32
SMAD3-214ENST00000560402 RBM12B-AS1Q9P1G2 102 aa6.81□□□□□ -1.32
SMAD3-214ENST00000560402 SPINK7P58062 85 aa6.8□□□□□ -1.32
SMAD3-214ENST00000560402 KRTAP9-7A8MTY7 169 aa6.79□□□□□ -1.32
SMAD3-214ENST00000560402 MPLKIPQ8TAP9 179 aa6.79□□□□□ -1.32
SMAD3-214ENST00000560402 MT2AP02795 61 aa6.77□□□□□ -1.33
SMAD3-214ENST00000560402 Q1T7F1 81 aa6.77□□□□□ -1.33
SMAD3-214ENST00000560402 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
SMAD3-214ENST00000560402 FCGBPQ9Y6R7 5405 aaPredicted RBP6.73□□□□□ -1.33
SMAD3-214ENST00000560402 C4orf26Q17RF5 130 aa6.72□□□□□ -1.33
SMAD3-214ENST00000560402 MT1FP04733 61 aa6.71□□□□□ -1.34
SMAD3-214ENST00000560402 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
SMAD3-214ENST00000560402 LCE2BO14633 110 aa6.67□□□□□ -1.34
SMAD3-214ENST00000560402 KRTAP9-3Q9BYQ3 159 aa6.67□□□□□ -1.34
SMAD3-214ENST00000560402 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
SMAD3-214ENST00000560402 PRR15LQ9BU68 103 aa6.65□□□□□ -1.34
SMAD3-214ENST00000560402 LINC01558Q9Y6Z2 57 aa6.65□□□□□ -1.34
SMAD3-214ENST00000560402 PSPHP1O15172 72 aa6.62□□□□□ -1.35
SMAD3-214ENST00000560402 SEC61GP60059 68 aa6.57□□□□□ -1.36
SMAD3-214ENST00000560402 A0A1B0GU69 56 aa6.56□□□□□ -1.36
SMAD3-214ENST00000560402 Q5VV11 94 aa6.53□□□□□ -1.36
SMAD3-214ENST00000560402 KRTAP3-1Q9BYR8 98 aa6.53□□□□□ -1.36
SMAD3-214ENST00000560402 KRTAP19-6Q3LI70 58 aa6.52□□□□□ -1.37
SMAD3-214ENST00000560402 MACF1Q9UPN3 7388 aaKnown RBP6.5□□□□□ -1.37
SMAD3-214ENST00000560402 BRK1Q8WUW1 75 aa6.5□□□□□ -1.37
SMAD3-214ENST00000560402 A6NED7 52 aa6.49□□□□□ -1.37
SMAD3-214ENST00000560402 H1FX-AS1Q4G0G2 97 aa6.49□□□□□ -1.37
SMAD3-214ENST00000560402 S4R3F8 94 aa6.49□□□□□ -1.37
SMAD3-214ENST00000560402 SYNE2Q8WXH0 6885 aaKnown RBP6.46□□□□□ -1.38
SMAD3-214ENST00000560402 PRO0628Q9UI54 55 aa6.43□□□□□ -1.38
SMAD3-214ENST00000560402 UQCR11O14957 56 aa6.39□□□□□ -1.39
SMAD3-214ENST00000560402 LCA10Q71F78 164 aa6.39□□□□□ -1.39
SMAD3-214ENST00000560402 CDC42SE1Q9NRR8 79 aa6.37□□□□□ -1.39
SMAD3-214ENST00000560402 CSAG1Q6PB30 78 aa6.34□□□□□ -1.39
SMAD3-214ENST00000560402 KRTAP6-3Q3LI67 103 aa6.32□□□□□ -1.4
SMAD3-214ENST00000560402 MIR22HGQ0VDD5 57 aa6.31□□□□□ -1.4
SMAD3-214ENST00000560402 A0A1B0GU33 70 aa6.29□□□□□ -1.4
SMAD3-214ENST00000560402 SPATA8Q6RVD6 105 aa6.26□□□□□ -1.41
SMAD3-214ENST00000560402 H0YAA0 97 aa6.2□□□□□ -1.42
SMAD3-214ENST00000560402 ADM2Q7Z4H4 148 aa6.18□□□□□ -1.42
SMAD3-214ENST00000560402 PMAIP1Q13794 54 aa6.16□□□□□ -1.42
SMAD3-214ENST00000560402 A6NN06 94 aa6.15□□□□□ -1.42
SMAD3-214ENST00000560402 K7ERS5 55 aa6.15□□□□□ -1.42
SMAD3-214ENST00000560402 SVIPQ8NHG7 77 aa6.15□□□□□ -1.42
SMAD3-214ENST00000560402 A8MU10 97 aa6.14□□□□□ -1.43
SMAD3-214ENST00000560402 MT1BP07438 61 aa6.12□□□□□ -1.43
SMAD3-214ENST00000560402 NEBP20929 6669 aa6.12□□□□□ -1.43
SMAD3-214ENST00000560402 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
SMAD3-214ENST00000560402 SPRR2GQ9BYE4 73 aa6.11□□□□□ -1.43
SMAD3-214ENST00000560402 MUC12Q9UKN1 5478 aa6.11□□□□□ -1.43
SMAD3-214ENST00000560402 M0QZ58 72 aa6.09□□□□□ -1.43
SMAD3-214ENST00000560402 P0C880 135 aa6.08□□□□□ -1.44
SMAD3-214ENST00000560402 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
SMAD3-214ENST00000560402 R4GN34 69 aa6□□□□□ -1.45
SMAD3-214ENST00000560402 CRIPTQ9P021 101 aa5.98□□□□□ -1.45
SMAD3-214ENST00000560402 A0A0D9SG42 100 aa5.97□□□□□ -1.45
SMAD3-214ENST00000560402 KRTAP5-9P26371 169 aa5.96□□□□□ -1.46
SMAD3-214ENST00000560402 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
SMAD3-214ENST00000560402 MDN1Q9NU22 5596 aa5.95□□□□□ -1.46
SMAD3-214ENST00000560402 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
SMAD3-214ENST00000560402 KRTAP20-1Q3LI63 56 aa5.94□□□□□ -1.46
SMAD3-214ENST00000560402 KMT2DO14686 5537 aa5.92□□□□□ -1.46
SMAD3-214ENST00000560402 LINC01554Q52M75 96 aa5.86□□□□□ -1.47
SMAD3-214ENST00000560402 SPINT4Q6UDR6 99 aa5.86□□□□□ -1.47
SMAD3-214ENST00000560402 KRTAP12-1P59990 96 aa5.81□□□□□ -1.48
SMAD3-214ENST00000560402 PRO2289Q9P1D8 64 aa5.79□□□□□ -1.48
SMAD3-214ENST00000560402 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
SMAD3-214ENST00000560402 ROMO1P60602 79 aa5.78□□□□□ -1.48
SMAD3-214ENST00000560402 KRTAP2-3P0C7H8 128 aa5.73□□□□□ -1.49
SMAD3-214ENST00000560402 KRTAP2-4Q9BYR9 128 aa5.73□□□□□ -1.49
SMAD3-214ENST00000560402 SPRR2FQ96RM1 72 aa5.71□□□□□ -1.5
SMAD3-214ENST00000560402 MT1XP80297 61 aa5.69□□□□□ -1.5
SMAD3-214ENST00000560402 SPRR2EP22531 72 aa5.68□□□□□ -1.5
SMAD3-214ENST00000560402 SPRR2BP35325 72 aa5.68□□□□□ -1.5
SMAD3-214ENST00000560402 SPRR2AP35326 72 aa5.68□□□□□ -1.5
SMAD3-214ENST00000560402 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
SMAD3-214ENST00000560402 PLAC4Q8WY50 150 aa5.68□□□□□ -1.5
SMAD3-214ENST00000560402 PRAC1Q96KF2 57 aa5.65□□□□□ -1.5
SMAD3-214ENST00000560402 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
SMAD3-214ENST00000560402 LCE1AQ5T7P2 110 aa5.57□□□□□ -1.52
SMAD3-214ENST00000560402 KRTAP25-1Q3LHN0 102 aa5.56□□□□□ -1.52
SMAD3-214ENST00000560402 KRTAP2-2Q9BYT5 123 aa5.54□□□□□ -1.52
SMAD3-214ENST00000560402 KRTAP2-1Q9BYU5 128 aa5.54□□□□□ -1.52
SMAD3-214ENST00000560402 SPRR2DP22532 72 aa5.5□□□□□ -1.53
SMAD3-214ENST00000560402 KRTAP4-8A0A0G2JLE6 195 aa5.46□□□□□ -1.54
SMAD3-214ENST00000560402 KRTAP4-8Q9BYQ9 185 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms