RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 HERC1Q15751 4861 aa12.02□□□□□ -0.49
TM2D3-209ENST00000560013 A6NED7 52 aa11.91□□□□□ -0.5
TM2D3-209ENST00000560013 HMCN2Q8NDA2 5059 aa11.9□□□□□ -0.5
TM2D3-209ENST00000560013 RBM12B-AS1Q9P1G2 102 aa11.9□□□□□ -0.5
TM2D3-209ENST00000560013 MUC17Q685J3 4493 aa11.88□□□□□ -0.51
TM2D3-209ENST00000560013 KRTAP4-1Q9BYQ7 146 aa11.88□□□□□ -0.51
TM2D3-209ENST00000560013 A8MU10 97 aa11.85□□□□□ -0.51
TM2D3-209ENST00000560013 SPTSSBQ8NFR3 76 aa11.83□□□□□ -0.52
TM2D3-209ENST00000560013 LCA10Q71F78 164 aa11.82□□□□□ -0.52
TM2D3-209ENST00000560013 H1FX-AS1Q4G0G2 97 aa11.8□□□□□ -0.52
TM2D3-209ENST00000560013 CDC42SE1Q9NRR8 79 aa11.8□□□□□ -0.52
TM2D3-209ENST00000560013 A0A1B0GU69 56 aa11.77□□□□□ -0.53
TM2D3-209ENST00000560013 S4R3F8 94 aa11.74□□□□□ -0.53
TM2D3-209ENST00000560013 KRTAP3-3Q9BYR6 98 aa11.68□□□□□ -0.54
TM2D3-209ENST00000560013 PMAIP1Q13794 54 aa11.65□□□□□ -0.54
TM2D3-209ENST00000560013 KRTAP19-2Q3LHN2 52 aa11.57□□□□□ -0.56
TM2D3-209ENST00000560013 SEC61GP60059 68 aa11.54□□□□□ -0.56
TM2D3-209ENST00000560013 MUC2Q02817 5179 aa11.54□□□□□ -0.56
TM2D3-209ENST00000560013 A6NN06 94 aa11.51□□□□□ -0.57
TM2D3-209ENST00000560013 UQCR11O14957 56 aa11.49□□□□□ -0.57
TM2D3-209ENST00000560013 CSAG1Q6PB30 78 aa11.47□□□□□ -0.57
TM2D3-209ENST00000560013 SPATA8Q6RVD6 105 aa11.46□□□□□ -0.58
TM2D3-209ENST00000560013 MIR22HGQ0VDD5 57 aa11.42□□□□□ -0.58
TM2D3-209ENST00000560013 KTN1-AS1Q86SY8 53 aa11.41□□□□□ -0.58
TM2D3-209ENST00000560013 UBR4Q5T4S7 5183 aa11.37□□□□□ -0.59
TM2D3-209ENST00000560013 RNF213Q63HN8 5207 aa11.31□□□□□ -0.6
TM2D3-209ENST00000560013 KRTAP10-6P60371 365 aaPredicted RBP11.28□□□□□ -0.6
TM2D3-209ENST00000560013 KRTAP3-2Q9BYR7 98 aa11.28□□□□□ -0.6
TM2D3-209ENST00000560013 A0A1B0GU33 70 aa11.27□□□□□ -0.61
TM2D3-209ENST00000560013 LCE2CQ5TA81 110 aa11.27□□□□□ -0.61
TM2D3-209ENST00000560013 FLGP20930 4061 aaPredicted RBP11.26□□□□□ -0.61
TM2D3-209ENST00000560013 ADM2Q7Z4H4 148 aa11.23□□□□□ -0.61
TM2D3-209ENST00000560013 H0YAA0 97 aa11.22□□□□□ -0.61
TM2D3-209ENST00000560013 P0C880 135 aa11.19□□□□□ -0.62
TM2D3-209ENST00000560013 MT1HP80294 61 aa11.04□□□□□ -0.64
TM2D3-209ENST00000560013 FAT4Q6V0I7 4981 aa11.02□□□□□ -0.65
TM2D3-209ENST00000560013 KRTAP13-4Q3LI77 160 aa10.98□□□□□ -0.65
TM2D3-209ENST00000560013 M0R2T5 61 aa10.97□□□□□ -0.65
TM2D3-209ENST00000560013 M0QZ58 72 aa10.91□□□□□ -0.66
TM2D3-209ENST00000560013 PRAC1Q96KF2 57 aa10.88□□□□□ -0.67
TM2D3-209ENST00000560013 LORP23490 312 aaPredicted RBP10.85□□□□□ -0.67
TM2D3-209ENST00000560013 R4GN34 69 aa10.84□□□□□ -0.67
TM2D3-209ENST00000560013 A0A0D9SG42 100 aa10.79□□□□□ -0.68
TM2D3-209ENST00000560013 K7ERS5 55 aa10.77□□□□□ -0.69
TM2D3-209ENST00000560013 CRIPTQ9P021 101 aa10.7□□□□□ -0.7
TM2D3-209ENST00000560013 KRTAP9-8Q9BYQ0 159 aa10.65□□□□□ -0.7
TM2D3-209ENST00000560013 LINC01554Q52M75 96 aa10.64□□□□□ -0.71
TM2D3-209ENST00000560013 MT2AP02795 61 aa10.61□□□□□ -0.71
TM2D3-209ENST00000560013 KRTAP12-1P59990 96 aa10.57□□□□□ -0.72
TM2D3-209ENST00000560013 MT1FP04733 61 aa10.56□□□□□ -0.72
TM2D3-209ENST00000560013 KRTAP12-2P59991 146 aa10.55□□□□□ -0.72
TM2D3-209ENST00000560013 KRTAP10-10P60014 251 aa10.55□□□□□ -0.72
TM2D3-209ENST00000560013 SPINT4Q6UDR6 99 aa10.54□□□□□ -0.72
TM2D3-209ENST00000560013 LCE2AQ5TA79 106 aaPredicted RBP10.53□□□□□ -0.72
TM2D3-209ENST00000560013 SPRR2GQ9BYE4 73 aa10.46□□□□□ -0.74
TM2D3-209ENST00000560013 ROMO1P60602 79 aa10.44□□□□□ -0.74
TM2D3-209ENST00000560013 KRTAP25-1Q3LHN0 102 aa10.42□□□□□ -0.74
TM2D3-209ENST00000560013 KRTAP19-1Q8IUB9 90 aa10.42□□□□□ -0.74
TM2D3-209ENST00000560013 KRTAP9-3Q9BYQ3 159 aa10.25□□□□□ -0.77
TM2D3-209ENST00000560013 KRTAP19-8Q3LI54 63 aa10.16□□□□□ -0.78
TM2D3-209ENST00000560013 CAMK2N1Q7Z7J9 78 aa10.16□□□□□ -0.78
TM2D3-209ENST00000560013 PLAC4Q8WY50 150 aa10.15□□□□□ -0.78
TM2D3-209ENST00000560013 MT1BP07438 61 aa10.02□□□□□ -0.8
TM2D3-209ENST00000560013 C10orf95Q9H7T3 257 aa10□□□□□ -0.81
TM2D3-209ENST00000560013 LCE2BO14633 110 aa9.96□□□□□ -0.81
TM2D3-209ENST00000560013 MT1XP80297 61 aa9.72□□□□□ -0.85
TM2D3-209ENST00000560013 KRTAP10-5P60370 271 aa9.71□□□□□ -0.85
TM2D3-209ENST00000560013 TNP1P09430 55 aa9.68□□□□□ -0.86
TM2D3-209ENST00000560013 USH2AO75445 5202 aa9.62□□□□□ -0.87
TM2D3-209ENST00000560013 PRO2289Q9P1D8 64 aa9.62□□□□□ -0.87
TM2D3-209ENST00000560013 LCE2DQ5TA82 110 aaPredicted RBP9.53□□□□□ -0.88
TM2D3-209ENST00000560013 PP632Q6XCG6 107 aa9.49□□□□□ -0.89
TM2D3-209ENST00000560013 KRTAP15-1Q3LI76 137 aa9.43□□□□□ -0.9
TM2D3-209ENST00000560013 KRTAP23-1A1A580 65 aa9.4□□□□□ -0.9
TM2D3-209ENST00000560013 KRTAP10-7P60409 375 aaPredicted RBP9.34□□□□□ -0.91
TM2D3-209ENST00000560013 KRTAP19-6Q3LI70 58 aa9.32□□□□□ -0.92
TM2D3-209ENST00000560013 SSPOA2VEC9 5147 aa9.3□□□□□ -0.92
TM2D3-209ENST00000560013 KRTAP10-12P60413 245 aa9.25□□□□□ -0.93
TM2D3-209ENST00000560013 LCE3AQ5TA76 89 aa9.25□□□□□ -0.93
TM2D3-209ENST00000560013 FSIP2Q5CZC0 6907 aa9.21□□□□□ -0.93
TM2D3-209ENST00000560013 H3BS24 57 aa9.16□□□□□ -0.94
TM2D3-209ENST00000560013 KRTAP9-2Q9BYQ4 174 aa9.11□□□□□ -0.95
TM2D3-209ENST00000560013 KRTAP8-1Q8IUC2 63 aa9.06□□□□□ -0.96
TM2D3-209ENST00000560013 NDUFAF8A1L188 74 aa9.04□□□□□ -0.96
TM2D3-209ENST00000560013 KRTAP4-8A0A0G2JLE6 195 aa8.96□□□□□ -0.97
TM2D3-209ENST00000560013 KRTAP4-8Q9BYQ9 185 aa8.96□□□□□ -0.97
TM2D3-209ENST00000560013 KMT2DO14686 5537 aa8.91□□□□□ -0.98
TM2D3-209ENST00000560013 FCGBPQ9Y6R7 5405 aaPredicted RBP8.89□□□□□ -0.99
TM2D3-209ENST00000560013 KRTAP12-3P60328 96 aa8.88□□□□□ -0.99
TM2D3-209ENST00000560013 KRTAP19-5Q3LI72 72 aa8.81□□□□□ -1
TM2D3-209ENST00000560013 CRCT1Q9UGL9 99 aa8.81□□□□□ -1
TM2D3-209ENST00000560013 LUZP6Q538Z0 58 aa8.68□□□□□ -1.02
TM2D3-209ENST00000560013 KRTAP19-7Q3SYF9 63 aa8.67□□□□□ -1.02
TM2D3-209ENST00000560013 SPRR5A0A1B0GTR4 108 aa8.66□□□□□ -1.02
TM2D3-209ENST00000560013 MT1EP04732 61 aa8.51□□□□□ -1.05
TM2D3-209ENST00000560013 MACF1Q9UPN3 7388 aaKnown RBP8.47□□□□□ -1.05
TM2D3-209ENST00000560013 MT1LQ93083 61 aa8.35□□□□□ -1.07
TM2D3-209ENST00000560013 KRTAP9-6A0A140TA67 174 aa8.34□□□□□ -1.07
TM2D3-209ENST00000560013 LCE3CQ5T5A8 94 aa8.3□□□□□ -1.08
TM2D3-209ENST00000560013 SPRR2FQ96RM1 72 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms