RNA–Protein interactions for RNA: ENST00000559889.5

IDH3A-217, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,461 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-217ENST00000559889 C4orf26Q17RF5 130 aa4.92□□□□□ -1.62
IDH3A-217ENST00000559889 LCE1DQ5T752 114 aa4.91□□□□□ -1.62
IDH3A-217ENST00000559889 C9orf92A6NGG3 77 aa4.9□□□□□ -1.62
IDH3A-217ENST00000559889 KRTAP19-2Q3LHN2 52 aa4.89□□□□□ -1.63
IDH3A-217ENST00000559889 IGKV2D-30A0A075B6S6 120 aa4.87□□□□□ -1.63
IDH3A-217ENST00000559889 IGKV2-30P06310 120 aa4.87□□□□□ -1.63
IDH3A-217ENST00000559889 COA5Q86WW8 74 aa4.85□□□□□ -1.63
IDH3A-217ENST00000559889 HRES1P13985 223 aa4.84□□□□□ -1.64
IDH3A-217ENST00000559889 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
IDH3A-217ENST00000559889 KRTAP4-9Q9BYQ8 210 aa4.83□□□□□ -1.64
IDH3A-217ENST00000559889 RPL37P61927 97 aaKnown RBP4.82□□□□□ -1.64
IDH3A-217ENST00000559889 MT1HP80294 61 aa4.82□□□□□ -1.64
IDH3A-217ENST00000559889 PSPHP1O15172 72 aa4.8□□□□□ -1.64
IDH3A-217ENST00000559889 Q1T7F1 81 aa4.79□□□□□ -1.64
IDH3A-217ENST00000559889 ACYP2P14621 99 aa4.78□□□□□ -1.64
IDH3A-217ENST00000559889 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
IDH3A-217ENST00000559889 C7orf65Q6ZTY9 151 aa4.77□□□□□ -1.65
IDH3A-217ENST00000559889 A8MUU9 505 aa4.77□□□□□ -1.65
IDH3A-217ENST00000559889 C20orf166-AS1Q96NR2 134 aa4.77□□□□□ -1.65
IDH3A-217ENST00000559889 FLGP20930 4061 aaPredicted RBP4.75□□□□□ -1.65
IDH3A-217ENST00000559889 CHKB-CPT1BH3BT56 60 aa4.75□□□□□ -1.65
IDH3A-217ENST00000559889 DMAC1Q96GE9 116 aa4.75□□□□□ -1.65
IDH3A-217ENST00000559889 KRTAP4-2Q9BYR5 136 aa4.75□□□□□ -1.65
IDH3A-217ENST00000559889 V9GYY9 64 aa4.75□□□□□ -1.65
IDH3A-217ENST00000559889 A8MUN3 132 aa4.74□□□□□ -1.65
IDH3A-217ENST00000559889 Q75L30 129 aa4.73□□□□□ -1.65
IDH3A-217ENST00000559889 PRR15LQ9BU68 103 aa4.73□□□□□ -1.65
IDH3A-217ENST00000559889 KRTAP10-6P60371 365 aaPredicted RBP4.72□□□□□ -1.65
IDH3A-217ENST00000559889 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
IDH3A-217ENST00000559889 SPINK7P58062 85 aa4.7□□□□□ -1.66
IDH3A-217ENST00000559889 ATP11AUNQ6ZP68 121 aa4.7□□□□□ -1.66
IDH3A-217ENST00000559889 COX6B2Q6YFQ2 88 aa4.69□□□□□ -1.66
IDH3A-217ENST00000559889 Q5VV11 94 aa4.68□□□□□ -1.66
IDH3A-217ENST00000559889 CRCT1Q9UGL9 99 aa4.68□□□□□ -1.66
IDH3A-217ENST00000559889 M0R2T5 61 aa4.67□□□□□ -1.66
IDH3A-217ENST00000559889 LINC01558Q9Y6Z2 57 aa4.66□□□□□ -1.66
IDH3A-217ENST00000559889 PRO0628Q9UI54 55 aa4.63□□□□□ -1.67
IDH3A-217ENST00000559889 A6NED7 52 aa4.63□□□□□ -1.67
IDH3A-217ENST00000559889 A0A1B0GU69 56 aa4.6□□□□□ -1.67
IDH3A-217ENST00000559889 KRTAP3-1Q9BYR8 98 aa4.6□□□□□ -1.67
IDH3A-217ENST00000559889 A8MU10 97 aa4.59□□□□□ -1.67
IDH3A-217ENST00000559889 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
IDH3A-217ENST00000559889 KRTAP4-11Q9BYQ6 195 aa4.56□□□□□ -1.68
IDH3A-217ENST00000559889 SPTSSBQ8NFR3 76 aa4.55□□□□□ -1.68
IDH3A-217ENST00000559889 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
IDH3A-217ENST00000559889 LCA10Q71F78 164 aa4.54□□□□□ -1.68
IDH3A-217ENST00000559889 SEC61GP60059 68 aa4.53□□□□□ -1.68
IDH3A-217ENST00000559889 USH2AO75445 5202 aa4.51□□□□□ -1.69
IDH3A-217ENST00000559889 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
IDH3A-217ENST00000559889 SSPOA2VEC9 5147 aa4.48□□□□□ -1.69
IDH3A-217ENST00000559889 MT2AP02795 61 aa4.48□□□□□ -1.69
IDH3A-217ENST00000559889 RBM12B-AS1Q9P1G2 102 aa4.48□□□□□ -1.69
IDH3A-217ENST00000559889 UQCR11O14957 56 aa4.47□□□□□ -1.69
IDH3A-217ENST00000559889 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
IDH3A-217ENST00000559889 MT1FP04733 61 aa4.45□□□□□ -1.7
IDH3A-217ENST00000559889 MIR22HGQ0VDD5 57 aa4.45□□□□□ -1.7
IDH3A-217ENST00000559889 S4R3F8 94 aa4.45□□□□□ -1.7
IDH3A-217ENST00000559889 KRTAP9-3Q9BYQ3 159 aa4.42□□□□□ -1.7
IDH3A-217ENST00000559889 H1FX-AS1Q4G0G2 97 aa4.41□□□□□ -1.7
IDH3A-217ENST00000559889 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
IDH3A-217ENST00000559889 A0A1B0GU33 70 aa4.4□□□□□ -1.71
IDH3A-217ENST00000559889 KRTAP10-10P60014 251 aa4.39□□□□□ -1.71
IDH3A-217ENST00000559889 FCGBPQ9Y6R7 5405 aaPredicted RBP4.39□□□□□ -1.71
IDH3A-217ENST00000559889 H0YAA0 97 aa4.35□□□□□ -1.71
IDH3A-217ENST00000559889 A6NN06 94 aa4.34□□□□□ -1.72
IDH3A-217ENST00000559889 CSAG1Q6PB30 78 aa4.33□□□□□ -1.72
IDH3A-217ENST00000559889 KRTAP9-7A8MTY7 169 aa4.32□□□□□ -1.72
IDH3A-217ENST00000559889 P0C880 135 aa4.3□□□□□ -1.72
IDH3A-217ENST00000559889 ADM2Q7Z4H4 148 aa4.3□□□□□ -1.72
IDH3A-217ENST00000559889 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
IDH3A-217ENST00000559889 A0A0D9SG42 100 aa4.26□□□□□ -1.73
IDH3A-217ENST00000559889 KRTAP19-6Q3LI70 58 aa4.25□□□□□ -1.73
IDH3A-217ENST00000559889 KRTAP13-4Q3LI77 160 aa4.25□□□□□ -1.73
IDH3A-217ENST00000559889 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
IDH3A-217ENST00000559889 LCE5AQ5TCM9 118 aa4.22□□□□□ -1.73
IDH3A-217ENST00000559889 K7ERS5 55 aa4.21□□□□□ -1.73
IDH3A-217ENST00000559889 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
IDH3A-217ENST00000559889 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
IDH3A-217ENST00000559889 M0QZ58 72 aa4.15□□□□□ -1.75
IDH3A-217ENST00000559889 LINC01554Q52M75 96 aa4.15□□□□□ -1.75
IDH3A-217ENST00000559889 SPINT4Q6UDR6 99 aa4.14□□□□□ -1.75
IDH3A-217ENST00000559889 R4GN34 69 aa4.14□□□□□ -1.75
IDH3A-217ENST00000559889 KRTAP12-2P59991 146 aa4.11□□□□□ -1.75
IDH3A-217ENST00000559889 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
IDH3A-217ENST00000559889 MT1BP07438 61 aa4.08□□□□□ -1.76
IDH3A-217ENST00000559889 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
IDH3A-217ENST00000559889 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
IDH3A-217ENST00000559889 SPRR2GQ9BYE4 73 aa4.07□□□□□ -1.76
IDH3A-217ENST00000559889 KRTAP6-3Q3LI67 103 aa4.06□□□□□ -1.76
IDH3A-217ENST00000559889 ROMO1P60602 79 aa4.05□□□□□ -1.76
IDH3A-217ENST00000559889 KRTAP19-8Q3LI54 63 aa4.05□□□□□ -1.76
IDH3A-217ENST00000559889 CRIPTQ9P021 101 aa4.05□□□□□ -1.76
IDH3A-217ENST00000559889 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
IDH3A-217ENST00000559889 KRTAP25-1Q3LHN0 102 aa3.97□□□□□ -1.77
IDH3A-217ENST00000559889 MUC12Q9UKN1 5478 aa3.97□□□□□ -1.77
IDH3A-217ENST00000559889 NEBP20929 6669 aa3.93□□□□□ -1.78
IDH3A-217ENST00000559889 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
IDH3A-217ENST00000559889 CAMK2N1Q7Z7J9 78 aa3.92□□□□□ -1.78
IDH3A-217ENST00000559889 KMT2DO14686 5537 aa3.89□□□□□ -1.79
IDH3A-217ENST00000559889 MDN1Q9NU22 5596 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms