RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 C4orf26Q17RF5 130 aa7.29□□□□□ -1.24
CDC42BPB-205ENST00000559245 SPRR2GQ9BYE4 73 aa7.28□□□□□ -1.24
CDC42BPB-205ENST00000559245 KMT2DO14686 5537 aa7.25□□□□□ -1.25
CDC42BPB-205ENST00000559245 MDN1Q9NU22 5596 aa7.25□□□□□ -1.25
CDC42BPB-205ENST00000559245 OCR1Q9BZK8 76 aa7.24□□□□□ -1.25
CDC42BPB-205ENST00000559245 TP53AIP1Q9HCN2 124 aa7.24□□□□□ -1.25
CDC42BPB-205ENST00000559245 ATOX1O00244 68 aa7.19□□□□□ -1.26
CDC42BPB-205ENST00000559245 SCGB1A1P11684 91 aa7.19□□□□□ -1.26
CDC42BPB-205ENST00000559245 S4R3F8 94 aa7.19□□□□□ -1.26
CDC42BPB-205ENST00000559245 UQCRQO14949 82 aa7.18□□□□□ -1.26
CDC42BPB-205ENST00000559245 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
CDC42BPB-205ENST00000559245 SMIM20Q8N5G0 67 aa7.18□□□□□ -1.26
CDC42BPB-205ENST00000559245 KRTAP3-1Q9BYR8 98 aa7.17□□□□□ -1.26
CDC42BPB-205ENST00000559245 KRTAP2-3P0C7H8 128 aa7.16□□□□□ -1.26
CDC42BPB-205ENST00000559245 KRTAP2-4Q9BYR9 128 aa7.16□□□□□ -1.26
CDC42BPB-205ENST00000559245 TRAV22A0A0B4J277 110 aa7.14□□□□□ -1.27
CDC42BPB-205ENST00000559245 KLKP1Q107X0 134 aa7.14□□□□□ -1.27
CDC42BPB-205ENST00000559245 LCA10Q71F78 164 aa7.14□□□□□ -1.27
CDC42BPB-205ENST00000559245 TRAV7A0A075B6U4 112 aa7.13□□□□□ -1.27
CDC42BPB-205ENST00000559245 C1orf64Q8NEQ6 169 aa7.09□□□□□ -1.27
CDC42BPB-205ENST00000559245 H3BPC8 53 aa7.08□□□□□ -1.28
CDC42BPB-205ENST00000559245 SERP2Q8N6R1 65 aa7.08□□□□□ -1.28
CDC42BPB-205ENST00000559245 H0Y9P7 68 aa7.06□□□□□ -1.28
CDC42BPB-205ENST00000559245 LOC101927531A0A1B0GV80 90 aa7.04□□□□□ -1.28
CDC42BPB-205ENST00000559245 MP68P56378 58 aa7.02□□□□□ -1.29
CDC42BPB-205ENST00000559245 SPRR2FQ96RM1 72 aa7.02□□□□□ -1.29
CDC42BPB-205ENST00000559245 COX7CP15954 63 aa7.01□□□□□ -1.29
CDC42BPB-205ENST00000559245 SPRR2EP22531 72 aa7.01□□□□□ -1.29
CDC42BPB-205ENST00000559245 SPRR2BP35325 72 aa7.01□□□□□ -1.29
CDC42BPB-205ENST00000559245 SPRR2AP35326 72 aa7.01□□□□□ -1.29
CDC42BPB-205ENST00000559245 KRTAP3-3Q9BYR6 98 aa7□□□□□ -1.29
CDC42BPB-205ENST00000559245 CYP4F30PQ9H0H9 118 aa7□□□□□ -1.29
CDC42BPB-205ENST00000559245 CRIPTQ9P021 101 aa7□□□□□ -1.29
CDC42BPB-205ENST00000559245 LINC00208Q96KT6 92 aa6.98□□□□□ -1.29
CDC42BPB-205ENST00000559245 ANAPC13Q9BS18 74 aa6.98□□□□□ -1.29
CDC42BPB-205ENST00000559245 C20orf197Q8N268 126 aa6.92□□□□□ -1.3
CDC42BPB-205ENST00000559245 KRTAP2-2Q9BYT5 123 aa6.91□□□□□ -1.3
CDC42BPB-205ENST00000559245 KRTAP2-1Q9BYU5 128 aa6.91□□□□□ -1.3
CDC42BPB-205ENST00000559245 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
CDC42BPB-205ENST00000559245 LCE1AQ5T7P2 110 aa6.86□□□□□ -1.31
CDC42BPB-205ENST00000559245 PRO2289Q9P1D8 64 aa6.86□□□□□ -1.31
CDC42BPB-205ENST00000559245 KRTAP8-1Q8IUC2 63 aa6.85□□□□□ -1.31
CDC42BPB-205ENST00000559245 CCDC179H3BU77 68 aa6.84□□□□□ -1.31
CDC42BPB-205ENST00000559245 NDUFC1O43677 76 aa6.84□□□□□ -1.31
CDC42BPB-205ENST00000559245 CYSTM1Q9H1C7 97 aa6.83□□□□□ -1.32
CDC42BPB-205ENST00000559245 H7BZZ5 65 aa6.82□□□□□ -1.32
CDC42BPB-205ENST00000559245 MT1XP80297 61 aa6.82□□□□□ -1.32
CDC42BPB-205ENST00000559245 SPANXA2-OT1Q8N9U9 137 aa6.82□□□□□ -1.32
CDC42BPB-205ENST00000559245 A8MUN3 132 aa6.78□□□□□ -1.32
CDC42BPB-205ENST00000559245 H0YAA0 97 aa6.78□□□□□ -1.32
CDC42BPB-205ENST00000559245 SPRR2DP22532 72 aa6.78□□□□□ -1.32
CDC42BPB-205ENST00000559245 DMAC1Q96GE9 116 aa6.77□□□□□ -1.33
CDC42BPB-205ENST00000559245 KRTAP3-2Q9BYR7 98 aa6.76□□□□□ -1.33
CDC42BPB-205ENST00000559245 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
CDC42BPB-205ENST00000559245 PCP4P48539 62 aa6.73□□□□□ -1.33
CDC42BPB-205ENST00000559245 PLAC4Q8WY50 150 aa6.73□□□□□ -1.33
CDC42BPB-205ENST00000559245 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
CDC42BPB-205ENST00000559245 KRTAP4-8A0A0G2JLE6 195 aa6.68□□□□□ -1.34
CDC42BPB-205ENST00000559245 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
CDC42BPB-205ENST00000559245 ATP5EP56381 51 aaPredicted RBP6.66□□□□□ -1.34
CDC42BPB-205ENST00000559245 TMEM258P61165 79 aa6.66□□□□□ -1.34
CDC42BPB-205ENST00000559245 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
CDC42BPB-205ENST00000559245 ACYP2P14621 99 aa6.63□□□□□ -1.35
CDC42BPB-205ENST00000559245 R4GN34 69 aa6.57□□□□□ -1.36
CDC42BPB-205ENST00000559245 COA5Q86WW8 74 aa6.53□□□□□ -1.36
CDC42BPB-205ENST00000559245 KRTAP10-7P60409 375 aaPredicted RBP6.51□□□□□ -1.37
CDC42BPB-205ENST00000559245 M0QZ58 72 aa6.5□□□□□ -1.37
CDC42BPB-205ENST00000559245 P0C880 135 aa6.5□□□□□ -1.37
CDC42BPB-205ENST00000559245 KRTAP10-12P60413 245 aa6.48□□□□□ -1.37
CDC42BPB-205ENST00000559245 CHKB-CPT1BH3BT56 60 aa6.44□□□□□ -1.38
CDC42BPB-205ENST00000559245 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
CDC42BPB-205ENST00000559245 SPTSSBQ8NFR3 76 aa6.44□□□□□ -1.38
CDC42BPB-205ENST00000559245 SERP1Q9Y6X1 66 aa6.43□□□□□ -1.38
CDC42BPB-205ENST00000559245 GPR98Q8WXG9 6306 aa6.37□□□□□ -1.39
CDC42BPB-205ENST00000559245 RPS28P62857 69 aaKnown RBP6.36□□□□□ -1.39
CDC42BPB-205ENST00000559245 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
CDC42BPB-205ENST00000559245 KRTAP4-9Q9BYQ8 210 aa6.29□□□□□ -1.4
CDC42BPB-205ENST00000559245 LINC01558Q9Y6Z2 57 aa6.25□□□□□ -1.41
CDC42BPB-205ENST00000559245 SMIM26A0A096LP01 95 aa6.22□□□□□ -1.41
CDC42BPB-205ENST00000559245 Q1T7F1 81 aa6.2□□□□□ -1.42
CDC42BPB-205ENST00000559245 LCE5AQ5TCM9 118 aa6.18□□□□□ -1.42
CDC42BPB-205ENST00000559245 V9GYY9 64 aa6.17□□□□□ -1.42
CDC42BPB-205ENST00000559245 SEC61GP60059 68 aa6.16□□□□□ -1.42
CDC42BPB-205ENST00000559245 A0A1B0GU69 56 aa6.14□□□□□ -1.43
CDC42BPB-205ENST00000559245 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
CDC42BPB-205ENST00000559245 KRTAP19-3Q7Z4W3 81 aa6.11□□□□□ -1.43
CDC42BPB-205ENST00000559245 PRR15LQ9BU68 103 aa6.11□□□□□ -1.43
CDC42BPB-205ENST00000559245 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
CDC42BPB-205ENST00000559245 MT1EP04732 61 aa6.08□□□□□ -1.44
CDC42BPB-205ENST00000559245 A0A1B0GU33 70 aa6.05□□□□□ -1.44
CDC42BPB-205ENST00000559245 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
CDC42BPB-205ENST00000559245 PSPHP1O15172 72 aa5.98□□□□□ -1.45
CDC42BPB-205ENST00000559245 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
CDC42BPB-205ENST00000559245 HMCN1Q96RW7 5635 aa5.97□□□□□ -1.45
CDC42BPB-205ENST00000559245 MT4P47944 62 aa5.97□□□□□ -1.45
CDC42BPB-205ENST00000559245 LCE4AQ5TA78 99 aa5.97□□□□□ -1.45
CDC42BPB-205ENST00000559245 UQCR11O14957 56 aa5.95□□□□□ -1.46
CDC42BPB-205ENST00000559245 MT1GP13640 62 aa5.92□□□□□ -1.46
CDC42BPB-205ENST00000559245 SPATA8Q6RVD6 105 aa5.92□□□□□ -1.46
CDC42BPB-205ENST00000559245 AHNAK2Q8IVF2 5795 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms