RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 PSPHP1O15172 72 aa6.62□□□□□ -1.35
SMAD3-207ENST00000558763 PRO0628Q9UI54 55 aa6.62□□□□□ -1.35
SMAD3-207ENST00000558763 Q5VV11 94 aa6.6□□□□□ -1.35
SMAD3-207ENST00000558763 RNF213Q63HN8 5207 aa6.6□□□□□ -1.35
SMAD3-207ENST00000558763 KRTAP4-1Q9BYQ7 146 aa6.59□□□□□ -1.35
SMAD3-207ENST00000558763 PRR15LQ9BU68 103 aa6.57□□□□□ -1.36
SMAD3-207ENST00000558763 KRTAP3-3Q9BYR6 98 aa6.49□□□□□ -1.37
SMAD3-207ENST00000558763 SEC61GP60059 68 aa6.48□□□□□ -1.37
SMAD3-207ENST00000558763 LCA10Q71F78 164 aa6.46□□□□□ -1.38
SMAD3-207ENST00000558763 SPTSSBQ8NFR3 76 aa6.44□□□□□ -1.38
SMAD3-207ENST00000558763 A0A1B0GU69 56 aa6.44□□□□□ -1.38
SMAD3-207ENST00000558763 H1FX-AS1Q4G0G2 97 aa6.44□□□□□ -1.38
SMAD3-207ENST00000558763 BRK1Q8WUW1 75 aa6.42□□□□□ -1.38
SMAD3-207ENST00000558763 RBM12B-AS1Q9P1G2 102 aa6.42□□□□□ -1.38
SMAD3-207ENST00000558763 A8MU10 97 aa6.41□□□□□ -1.38
SMAD3-207ENST00000558763 S4R3F8 94 aa6.41□□□□□ -1.38
SMAD3-207ENST00000558763 KRTAP19-2Q3LHN2 52 aa6.4□□□□□ -1.38
SMAD3-207ENST00000558763 A6NED7 52 aa6.37□□□□□ -1.39
SMAD3-207ENST00000558763 FAT4Q6V0I7 4981 aa6.35□□□□□ -1.39
SMAD3-207ENST00000558763 CDC42SE1Q9NRR8 79 aa6.31□□□□□ -1.4
SMAD3-207ENST00000558763 LCE2CQ5TA81 110 aa6.31□□□□□ -1.4
SMAD3-207ENST00000558763 KRTAP3-2Q9BYR7 98 aa6.3□□□□□ -1.4
SMAD3-207ENST00000558763 KRTAP10-6P60371 365 aaPredicted RBP6.29□□□□□ -1.4
SMAD3-207ENST00000558763 FLGP20930 4061 aaPredicted RBP6.29□□□□□ -1.4
SMAD3-207ENST00000558763 UQCR11O14957 56 aa6.26□□□□□ -1.41
SMAD3-207ENST00000558763 SPATA8Q6RVD6 105 aa6.26□□□□□ -1.41
SMAD3-207ENST00000558763 PMAIP1Q13794 54 aa6.23□□□□□ -1.41
SMAD3-207ENST00000558763 CSAG1Q6PB30 78 aa6.23□□□□□ -1.41
SMAD3-207ENST00000558763 H0YAA0 97 aa6.22□□□□□ -1.41
SMAD3-207ENST00000558763 A0A1B0GU33 70 aa6.22□□□□□ -1.41
SMAD3-207ENST00000558763 MIR22HGQ0VDD5 57 aa6.22□□□□□ -1.41
SMAD3-207ENST00000558763 MT1HP80294 61 aa6.21□□□□□ -1.42
SMAD3-207ENST00000558763 P0C880 135 aa6.2□□□□□ -1.42
SMAD3-207ENST00000558763 ADM2Q7Z4H4 148 aa6.17□□□□□ -1.42
SMAD3-207ENST00000558763 M0R2T5 61 aa6.16□□□□□ -1.42
SMAD3-207ENST00000558763 KRTAP13-4Q3LI77 160 aa6.16□□□□□ -1.42
SMAD3-207ENST00000558763 LCE2AQ5TA79 106 aaPredicted RBP6.13□□□□□ -1.43
SMAD3-207ENST00000558763 A6NN06 94 aa6.08□□□□□ -1.44
SMAD3-207ENST00000558763 KTN1-AS1Q86SY8 53 aa6.03□□□□□ -1.44
SMAD3-207ENST00000558763 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
SMAD3-207ENST00000558763 M0QZ58 72 aa5.97□□□□□ -1.45
SMAD3-207ENST00000558763 A0A0D9SG42 100 aa5.96□□□□□ -1.46
SMAD3-207ENST00000558763 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
SMAD3-207ENST00000558763 MT2AP02795 61 aa5.91□□□□□ -1.46
SMAD3-207ENST00000558763 R4GN34 69 aa5.9□□□□□ -1.46
SMAD3-207ENST00000558763 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
SMAD3-207ENST00000558763 KRTAP12-2P59991 146 aa5.89□□□□□ -1.47
SMAD3-207ENST00000558763 MT1FP04733 61 aa5.87□□□□□ -1.47
SMAD3-207ENST00000558763 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
SMAD3-207ENST00000558763 K7ERS5 55 aa5.82□□□□□ -1.48
SMAD3-207ENST00000558763 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
SMAD3-207ENST00000558763 CRIPTQ9P021 101 aa5.79□□□□□ -1.48
SMAD3-207ENST00000558763 SPINT4Q6UDR6 99 aa5.78□□□□□ -1.48
SMAD3-207ENST00000558763 H3BS24 57 aa5.76□□□□□ -1.49
SMAD3-207ENST00000558763 KRTAP19-1Q8IUB9 90 aa5.74□□□□□ -1.49
SMAD3-207ENST00000558763 SPRR2GQ9BYE4 73 aa5.73□□□□□ -1.49
SMAD3-207ENST00000558763 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
SMAD3-207ENST00000558763 KRTAP9-3Q9BYQ3 159 aa5.72□□□□□ -1.49
SMAD3-207ENST00000558763 ROMO1P60602 79 aa5.69□□□□□ -1.5
SMAD3-207ENST00000558763 LCE2DQ5TA82 110 aaPredicted RBP5.63□□□□□ -1.51
SMAD3-207ENST00000558763 LCE2BO14633 110 aa5.62□□□□□ -1.51
SMAD3-207ENST00000558763 KRTAP9-2Q9BYQ4 174 aa5.6□□□□□ -1.51
SMAD3-207ENST00000558763 FSIP2Q5CZC0 6907 aa5.58□□□□□ -1.52
SMAD3-207ENST00000558763 C10orf95Q9H7T3 257 aa5.58□□□□□ -1.52
SMAD3-207ENST00000558763 USH2AO75445 5202 aa5.57□□□□□ -1.52
SMAD3-207ENST00000558763 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
SMAD3-207ENST00000558763 KRTAP25-1Q3LHN0 102 aa5.53□□□□□ -1.52
SMAD3-207ENST00000558763 MT1BP07438 61 aa5.51□□□□□ -1.53
SMAD3-207ENST00000558763 CAMK2N1Q7Z7J9 78 aa5.51□□□□□ -1.53
SMAD3-207ENST00000558763 PLAC4Q8WY50 150 aa5.47□□□□□ -1.53
SMAD3-207ENST00000558763 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
SMAD3-207ENST00000558763 MT1XP80297 61 aa5.36□□□□□ -1.55
SMAD3-207ENST00000558763 KRTAP10-5P60370 271 aa5.35□□□□□ -1.55
SMAD3-207ENST00000558763 CRCT1Q9UGL9 99 aa5.35□□□□□ -1.55
SMAD3-207ENST00000558763 KRTAP19-6Q3LI70 58 aa5.31□□□□□ -1.56
SMAD3-207ENST00000558763 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
SMAD3-207ENST00000558763 TNP1P09430 55 aa5.29□□□□□ -1.56
SMAD3-207ENST00000558763 FCGBPQ9Y6R7 5405 aaPredicted RBP5.24□□□□□ -1.57
SMAD3-207ENST00000558763 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
SMAD3-207ENST00000558763 PRO2289Q9P1D8 64 aa5.23□□□□□ -1.57
SMAD3-207ENST00000558763 KRTAP23-1A1A580 65 aa5.19□□□□□ -1.58
SMAD3-207ENST00000558763 PP632Q6XCG6 107 aa5.19□□□□□ -1.58
SMAD3-207ENST00000558763 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.58
SMAD3-207ENST00000558763 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
SMAD3-207ENST00000558763 MACF1Q9UPN3 7388 aaKnown RBP5.07□□□□□ -1.6
SMAD3-207ENST00000558763 KRTAP10-12P60413 245 aa5.07□□□□□ -1.6
SMAD3-207ENST00000558763 KRTAP8-1Q8IUC2 63 aa5.02□□□□□ -1.61
SMAD3-207ENST00000558763 KMT2DO14686 5537 aa5.01□□□□□ -1.61
SMAD3-207ENST00000558763 SYNE2Q8WXH0 6885 aaKnown RBP4.97□□□□□ -1.61
SMAD3-207ENST00000558763 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.96□□□□□ -1.61
SMAD3-207ENST00000558763 KRTAP15-1Q3LI76 137 aa4.96□□□□□ -1.61
SMAD3-207ENST00000558763 KRTAP4-8A0A0G2JLE6 195 aa4.93□□□□□ -1.62
SMAD3-207ENST00000558763 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
SMAD3-207ENST00000558763 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
SMAD3-207ENST00000558763 KRTAP19-5Q3LI72 72 aa4.84□□□□□ -1.63
SMAD3-207ENST00000558763 NDUFAF8A1L188 74 aa4.84□□□□□ -1.64
SMAD3-207ENST00000558763 KRTAP19-7Q3SYF9 63 aa4.79□□□□□ -1.64
SMAD3-207ENST00000558763 SPRR5A0A1B0GTR4 108 aa4.77□□□□□ -1.65
SMAD3-207ENST00000558763 KRTAP9-7A8MTY7 169 aa4.77□□□□□ -1.65
SMAD3-207ENST00000558763 KRTAP6-3Q3LI67 103 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 240.1 ms