RNA–Protein interactions for RNA: ENST00000558555.5

MEIS3-204, Transcript of Meis homeobox 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MEIS3, Length 1,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-204ENST00000558555 COA5Q86WW8 74 aa11.76□□□□□ -0.53
MEIS3-204ENST00000558555 LCA10Q71F78 164 aa11.71□□□□□ -0.54
MEIS3-204ENST00000558555 FLGP20930 4061 aaPredicted RBP11.7□□□□□ -0.54
MEIS3-204ENST00000558555 SERP1Q9Y6X1 66 aa11.65□□□□□ -0.54
MEIS3-204ENST00000558555 KRTAP9-2Q9BYQ4 174 aa11.63□□□□□ -0.55
MEIS3-204ENST00000558555 SPTSSBQ8NFR3 76 aa11.62□□□□□ -0.55
MEIS3-204ENST00000558555 MT1HP80294 61 aa11.6□□□□□ -0.55
MEIS3-204ENST00000558555 KRTAP3-3Q9BYR6 98 aa11.6□□□□□ -0.55
MEIS3-204ENST00000558555 CSAG1Q6PB30 78 aa11.57□□□□□ -0.56
MEIS3-204ENST00000558555 M0R2T5 61 aa11.57□□□□□ -0.56
MEIS3-204ENST00000558555 RPS28P62857 69 aaKnown RBP11.45□□□□□ -0.58
MEIS3-204ENST00000558555 KRTAP10-6P60371 365 aaPredicted RBP11.33□□□□□ -0.6
MEIS3-204ENST00000558555 LORP23490 312 aaPredicted RBP11.32□□□□□ -0.6
MEIS3-204ENST00000558555 SMIM26A0A096LP01 95 aa11.29□□□□□ -0.6
MEIS3-204ENST00000558555 LCE2DQ5TA82 110 aaPredicted RBP11.28□□□□□ -0.6
MEIS3-204ENST00000558555 H0YAA0 97 aa11.26□□□□□ -0.61
MEIS3-204ENST00000558555 SEC61GP60059 68 aa11.23□□□□□ -0.61
MEIS3-204ENST00000558555 ADM2Q7Z4H4 148 aa11.21□□□□□ -0.61
MEIS3-204ENST00000558555 KRTAP9-6A0A140TA67 174 aa11.18□□□□□ -0.62
MEIS3-204ENST00000558555 LINC01558Q9Y6Z2 57 aa11.18□□□□□ -0.62
MEIS3-204ENST00000558555 V9GYY9 64 aa11.18□□□□□ -0.62
MEIS3-204ENST00000558555 SVIPQ8NHG7 77 aa11.18□□□□□ -0.62
MEIS3-204ENST00000558555 FSIP2Q5CZC0 6907 aa11.16□□□□□ -0.62
MEIS3-204ENST00000558555 A0A1B0GU69 56 aa11.15□□□□□ -0.62
MEIS3-204ENST00000558555 Q1T7F1 81 aa11.13□□□□□ -0.63
MEIS3-204ENST00000558555 PRR15LQ9BU68 103 aa11.12□□□□□ -0.63
MEIS3-204ENST00000558555 KRTAP9-8Q9BYQ0 159 aa11.12□□□□□ -0.63
MEIS3-204ENST00000558555 KRTAP3-2Q9BYR7 98 aa11.11□□□□□ -0.63
MEIS3-204ENST00000558555 MT2AP02795 61 aa11.08□□□□□ -0.64
MEIS3-204ENST00000558555 P0C880 135 aa11.06□□□□□ -0.64
MEIS3-204ENST00000558555 KRTAP10-10P60014 251 aa11.04□□□□□ -0.64
MEIS3-204ENST00000558555 MT1FP04733 61 aa10.99□□□□□ -0.65
MEIS3-204ENST00000558555 CRCT1Q9UGL9 99 aa10.99□□□□□ -0.65
MEIS3-204ENST00000558555 PSPHP1O15172 72 aa10.96□□□□□ -0.65
MEIS3-204ENST00000558555 CRIPTQ9P021 101 aa10.92□□□□□ -0.66
MEIS3-204ENST00000558555 A0A1B0GU33 70 aa10.9□□□□□ -0.66
MEIS3-204ENST00000558555 R4GN34 69 aa10.87□□□□□ -0.67
MEIS3-204ENST00000558555 Q5VV11 94 aa10.84□□□□□ -0.67
MEIS3-204ENST00000558555 M0QZ58 72 aa10.82□□□□□ -0.68
MEIS3-204ENST00000558555 UQCR11O14957 56 aa10.75□□□□□ -0.69
MEIS3-204ENST00000558555 KRTAP9-3Q9BYQ3 159 aa10.74□□□□□ -0.69
MEIS3-204ENST00000558555 KRTAP13-4Q3LI77 160 aa10.71□□□□□ -0.69
MEIS3-204ENST00000558555 SPRR2GQ9BYE4 73 aa10.71□□□□□ -0.69
MEIS3-204ENST00000558555 SPATA8Q6RVD6 105 aa10.7□□□□□ -0.7
MEIS3-204ENST00000558555 KRTAP19-1Q8IUB9 90 aa10.68□□□□□ -0.7
MEIS3-204ENST00000558555 A6NED7 52 aa10.67□□□□□ -0.7
MEIS3-204ENST00000558555 USH2AO75445 5202 aa10.66□□□□□ -0.7
MEIS3-204ENST00000558555 LINC01554Q52M75 96 aa10.64□□□□□ -0.71
MEIS3-204ENST00000558555 MIR22HGQ0VDD5 57 aa10.6□□□□□ -0.71
MEIS3-204ENST00000558555 LCE2BO14633 110 aa10.58□□□□□ -0.72
MEIS3-204ENST00000558555 SSPOA2VEC9 5147 aa10.57□□□□□ -0.72
MEIS3-204ENST00000558555 A0A0D9SG42 100 aa10.55□□□□□ -0.72
MEIS3-204ENST00000558555 A8MU10 97 aa10.5□□□□□ -0.73
MEIS3-204ENST00000558555 KRTAP19-8Q3LI54 63 aa10.47□□□□□ -0.73
MEIS3-204ENST00000558555 A6NN06 94 aa10.43□□□□□ -0.74
MEIS3-204ENST00000558555 CDC42SE1Q9NRR8 79 aa10.4□□□□□ -0.74
MEIS3-204ENST00000558555 PLAC4Q8WY50 150 aa10.36□□□□□ -0.75
MEIS3-204ENST00000558555 SPINT4Q6UDR6 99 aa10.34□□□□□ -0.75
MEIS3-204ENST00000558555 MT1BP07438 61 aa10.33□□□□□ -0.76
MEIS3-204ENST00000558555 KRTAP12-1P59990 96 aa10.32□□□□□ -0.76
MEIS3-204ENST00000558555 FCGBPQ9Y6R7 5405 aaPredicted RBP10.3□□□□□ -0.76
MEIS3-204ENST00000558555 BRK1Q8WUW1 75 aa10.29□□□□□ -0.76
MEIS3-204ENST00000558555 KRTAP12-2P59991 146 aa10.26□□□□□ -0.77
MEIS3-204ENST00000558555 K7ERS5 55 aa10.25□□□□□ -0.77
MEIS3-204ENST00000558555 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.24□□□□□ -0.77
MEIS3-204ENST00000558555 CAMK2N1Q7Z7J9 78 aa10.16□□□□□ -0.78
MEIS3-204ENST00000558555 KRTAP19-6Q3LI70 58 aa10.14□□□□□ -0.79
MEIS3-204ENST00000558555 KRTAP9-7A8MTY7 169 aa10.07□□□□□ -0.8
MEIS3-204ENST00000558555 MACF1Q9UPN3 7388 aaKnown RBP9.98□□□□□ -0.81
MEIS3-204ENST00000558555 PRO2289Q9P1D8 64 aa9.97□□□□□ -0.81
MEIS3-204ENST00000558555 MT1XP80297 61 aa9.93□□□□□ -0.82
MEIS3-204ENST00000558555 KRTAP10-5P60370 271 aa9.91□□□□□ -0.82
MEIS3-204ENST00000558555 SYNE2Q8WXH0 6885 aaKnown RBP9.9□□□□□ -0.83
MEIS3-204ENST00000558555 PRO0628Q9UI54 55 aa9.89□□□□□ -0.83
MEIS3-204ENST00000558555 C10orf95Q9H7T3 257 aa9.76□□□□□ -0.85
MEIS3-204ENST00000558555 PMAIP1Q13794 54 aa9.73□□□□□ -0.85
MEIS3-204ENST00000558555 ROMO1P60602 79 aa9.7□□□□□ -0.86
MEIS3-204ENST00000558555 TNP1P09430 55 aa9.59□□□□□ -0.87
MEIS3-204ENST00000558555 KRTAP6-3Q3LI67 103 aa9.56□□□□□ -0.88
MEIS3-204ENST00000558555 KRTAP25-1Q3LHN0 102 aa9.53□□□□□ -0.88
MEIS3-204ENST00000558555 KRTAP10-7P60409 375 aaPredicted RBP9.51□□□□□ -0.89
MEIS3-204ENST00000558555 KRTAP10-12P60413 245 aa9.44□□□□□ -0.9
MEIS3-204ENST00000558555 MUC12Q9UKN1 5478 aa9.29□□□□□ -0.92
MEIS3-204ENST00000558555 KMT2DO14686 5537 aa9.24□□□□□ -0.93
MEIS3-204ENST00000558555 KRTAP4-8A0A0G2JLE6 195 aa9.2□□□□□ -0.94
MEIS3-204ENST00000558555 LCE3AQ5TA76 89 aa9.2□□□□□ -0.94
MEIS3-204ENST00000558555 KTN1-AS1Q86SY8 53 aa9.2□□□□□ -0.94
MEIS3-204ENST00000558555 KRTAP4-8Q9BYQ9 185 aa9.2□□□□□ -0.94
MEIS3-204ENST00000558555 KRTAP23-1A1A580 65 aa9.19□□□□□ -0.94
MEIS3-204ENST00000558555 KRTAP5-9P26371 169 aa9.17□□□□□ -0.94
MEIS3-204ENST00000558555 NEBP20929 6669 aa9.17□□□□□ -0.94
MEIS3-204ENST00000558555 PP632Q6XCG6 107 aa9.14□□□□□ -0.95
MEIS3-204ENST00000558555 KRTAP8-1Q8IUC2 63 aa9.11□□□□□ -0.95
MEIS3-204ENST00000558555 PRAC1Q96KF2 57 aa9.1□□□□□ -0.95
MEIS3-204ENST00000558555 MDN1Q9NU22 5596 aa9.04□□□□□ -0.96
MEIS3-204ENST00000558555 SPRR2FQ96RM1 72 aa8.96□□□□□ -0.98
MEIS3-204ENST00000558555 KRTAP19-5Q3LI72 72 aa8.92□□□□□ -0.98
MEIS3-204ENST00000558555 KRTAP12-3P60328 96 aa8.86□□□□□ -0.99
MEIS3-204ENST00000558555 KRTAP19-7Q3SYF9 63 aa8.85□□□□□ -0.99
MEIS3-204ENST00000558555 KRTAP20-1Q3LI63 56 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms