RNA–Protein interactions for RNA: ENST00000558478.1

AL136295.2-201, humanhuman

TSL 1 (best) BASIC

Gene AL136295.2, Length 747 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL136295.2-201ENST00000558478 A0A0U1RQV1 116 aa5.52□□□□□ -1.53
AL136295.2-201ENST00000558478 SMIM26A0A096LP01 95 aa5.51□□□□□ -1.53
AL136295.2-201ENST00000558478 Q5W150 140 aa5.5□□□□□ -1.53
AL136295.2-201ENST00000558478 SNURFQ9Y675 71 aa5.5□□□□□ -1.53
AL136295.2-201ENST00000558478 FAM236DA0A1B0GTK5 79 aa5.49□□□□□ -1.53
AL136295.2-201ENST00000558478 FAM236CP0DP71 79 aa5.49□□□□□ -1.53
AL136295.2-201ENST00000558478 C4orf26Q17RF5 130 aa5.49□□□□□ -1.53
AL136295.2-201ENST00000558478 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
AL136295.2-201ENST00000558478 C7orf65Q6ZTY9 151 aa5.48□□□□□ -1.53
AL136295.2-201ENST00000558478 IGKV2-30P06310 120 aa5.46□□□□□ -1.54
AL136295.2-201ENST00000558478 IGKV2D-30A0A075B6S6 120 aa5.45□□□□□ -1.54
AL136295.2-201ENST00000558478 SEC61BP60468 96 aaKnown RBP5.45□□□□□ -1.54
AL136295.2-201ENST00000558478 CYP4F30PQ9H0H9 118 aa5.44□□□□□ -1.54
AL136295.2-201ENST00000558478 H7BZZ5 65 aa5.43□□□□□ -1.54
AL136295.2-201ENST00000558478 PCOTHQ58A44 107 aa5.41□□□□□ -1.54
AL136295.2-201ENST00000558478 SPANXA2-OT1Q8N9U9 137 aa5.4□□□□□ -1.54
AL136295.2-201ENST00000558478 CYSTM1Q9H1C7 97 aa5.4□□□□□ -1.54
AL136295.2-201ENST00000558478 SPINK7P58062 85 aa5.39□□□□□ -1.55
AL136295.2-201ENST00000558478 PMAIP1Q13794 54 aa5.38□□□□□ -1.55
AL136295.2-201ENST00000558478 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
AL136295.2-201ENST00000558478 RNF213Q63HN8 5207 aa5.36□□□□□ -1.55
AL136295.2-201ENST00000558478 HRES1P13985 223 aa5.35□□□□□ -1.55
AL136295.2-201ENST00000558478 LPAP08519 4548 aa5.34□□□□□ -1.55
AL136295.2-201ENST00000558478 LRP2P98164 4655 aa5.32□□□□□ -1.56
AL136295.2-201ENST00000558478 A8MUN3 132 aa5.31□□□□□ -1.56
AL136295.2-201ENST00000558478 RBM12B-AS1Q9P1G2 102 aa5.29□□□□□ -1.56
AL136295.2-201ENST00000558478 ACYP2P14621 99 aa5.28□□□□□ -1.56
AL136295.2-201ENST00000558478 DMAC1Q96GE9 116 aa5.28□□□□□ -1.56
AL136295.2-201ENST00000558478 COX6B2Q6YFQ2 88 aa5.26□□□□□ -1.57
AL136295.2-201ENST00000558478 MUC17Q685J3 4493 aa5.25□□□□□ -1.57
AL136295.2-201ENST00000558478 CHKB-CPT1BH3BT56 60 aa5.22□□□□□ -1.57
AL136295.2-201ENST00000558478 COA5Q86WW8 74 aa5.21□□□□□ -1.58
AL136295.2-201ENST00000558478 Q1T7F1 81 aa5.2□□□□□ -1.58
AL136295.2-201ENST00000558478 KTN1-AS1Q86SY8 53 aa5.2□□□□□ -1.58
AL136295.2-201ENST00000558478 MPLKIPQ8TAP9 179 aa5.2□□□□□ -1.58
AL136295.2-201ENST00000558478 SPTSSBQ8NFR3 76 aa5.17□□□□□ -1.58
AL136295.2-201ENST00000558478 H1FX-AS1Q4G0G2 97 aa5.16□□□□□ -1.58
AL136295.2-201ENST00000558478 KRTAP4-1Q9BYQ7 146 aa5.15□□□□□ -1.59
AL136295.2-201ENST00000558478 KRTAP3-1Q9BYR8 98 aa5.15□□□□□ -1.59
AL136295.2-201ENST00000558478 S4R3F8 94 aa5.13□□□□□ -1.59
AL136295.2-201ENST00000558478 LCA10Q71F78 164 aa5.06□□□□□ -1.6
AL136295.2-201ENST00000558478 FAT4Q6V0I7 4981 aa5.06□□□□□ -1.6
AL136295.2-201ENST00000558478 MUC2Q02817 5179 aa5.04□□□□□ -1.6
AL136295.2-201ENST00000558478 CSAG1Q6PB30 78 aa5.03□□□□□ -1.6
AL136295.2-201ENST00000558478 KRTAP19-2Q3LHN2 52 aa5□□□□□ -1.61
AL136295.2-201ENST00000558478 PRR15LQ9BU68 103 aa5□□□□□ -1.61
AL136295.2-201ENST00000558478 KRTAP23-1A1A580 65 aa4.99□□□□□ -1.61
AL136295.2-201ENST00000558478 LINC01558Q9Y6Z2 57 aa4.98□□□□□ -1.61
AL136295.2-201ENST00000558478 A0A1B0GU69 56 aa4.96□□□□□ -1.62
AL136295.2-201ENST00000558478 A6NN06 94 aa4.95□□□□□ -1.62
AL136295.2-201ENST00000558478 CDC42SE1Q9NRR8 79 aa4.95□□□□□ -1.62
AL136295.2-201ENST00000558478 PSPHP1O15172 72 aa4.94□□□□□ -1.62
AL136295.2-201ENST00000558478 Q5VV11 94 aa4.93□□□□□ -1.62
AL136295.2-201ENST00000558478 FLGP20930 4061 aaPredicted RBP4.93□□□□□ -1.62
AL136295.2-201ENST00000558478 M0R2T5 61 aa4.92□□□□□ -1.62
AL136295.2-201ENST00000558478 H0YAA0 97 aa4.91□□□□□ -1.62
AL136295.2-201ENST00000558478 A6NED7 52 aa4.9□□□□□ -1.63
AL136295.2-201ENST00000558478 MT1HP80294 61 aa4.88□□□□□ -1.63
AL136295.2-201ENST00000558478 ADM2Q7Z4H4 148 aa4.86□□□□□ -1.63
AL136295.2-201ENST00000558478 LINC01554Q52M75 96 aa4.85□□□□□ -1.63
AL136295.2-201ENST00000558478 FSIP2Q5CZC0 6907 aa4.82□□□□□ -1.64
AL136295.2-201ENST00000558478 A0A1B0GU33 70 aa4.81□□□□□ -1.64
AL136295.2-201ENST00000558478 UQCR11O14957 56 aa4.81□□□□□ -1.64
AL136295.2-201ENST00000558478 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
AL136295.2-201ENST00000558478 P0C880 135 aa4.76□□□□□ -1.65
AL136295.2-201ENST00000558478 CRIPTQ9P021 101 aa4.76□□□□□ -1.65
AL136295.2-201ENST00000558478 M0QZ58 72 aa4.75□□□□□ -1.65
AL136295.2-201ENST00000558478 R4GN34 69 aa4.74□□□□□ -1.65
AL136295.2-201ENST00000558478 MIR22HGQ0VDD5 57 aa4.73□□□□□ -1.65
AL136295.2-201ENST00000558478 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
AL136295.2-201ENST00000558478 KRTAP10-10P60014 251 aa4.68□□□□□ -1.66
AL136295.2-201ENST00000558478 SPATA8Q6RVD6 105 aa4.68□□□□□ -1.66
AL136295.2-201ENST00000558478 CRCT1Q9UGL9 99 aa4.68□□□□□ -1.66
AL136295.2-201ENST00000558478 A8MU10 97 aa4.67□□□□□ -1.66
AL136295.2-201ENST00000558478 MT2AP02795 61 aa4.67□□□□□ -1.66
AL136295.2-201ENST00000558478 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
AL136295.2-201ENST00000558478 K7ERS5 55 aa4.62□□□□□ -1.67
AL136295.2-201ENST00000558478 MT1FP04733 61 aa4.62□□□□□ -1.67
AL136295.2-201ENST00000558478 A0A0D9SG42 100 aa4.6□□□□□ -1.67
AL136295.2-201ENST00000558478 SPRR2GQ9BYE4 73 aa4.59□□□□□ -1.67
AL136295.2-201ENST00000558478 PRAC1Q96KF2 57 aa4.56□□□□□ -1.68
AL136295.2-201ENST00000558478 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
AL136295.2-201ENST00000558478 KRTAP12-1P59990 96 aa4.49□□□□□ -1.69
AL136295.2-201ENST00000558478 ROMO1P60602 79 aa4.49□□□□□ -1.69
AL136295.2-201ENST00000558478 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
AL136295.2-201ENST00000558478 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
AL136295.2-201ENST00000558478 KRTAP12-2P59991 146 aa4.47□□□□□ -1.69
AL136295.2-201ENST00000558478 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
AL136295.2-201ENST00000558478 KRTAP19-8Q3LI54 63 aa4.46□□□□□ -1.7
AL136295.2-201ENST00000558478 CAMK2N1Q7Z7J9 78 aa4.45□□□□□ -1.7
AL136295.2-201ENST00000558478 A0A0A0MQY5 61 aa4.42□□□□□ -1.7
AL136295.2-201ENST00000558478 KRTAP25-1Q3LHN0 102 aa4.42□□□□□ -1.7
AL136295.2-201ENST00000558478 KRTAP10-7P60409 375 aaPredicted RBP4.37□□□□□ -1.71
AL136295.2-201ENST00000558478 MT1BP07438 61 aa4.36□□□□□ -1.71
AL136295.2-201ENST00000558478 SSPOA2VEC9 5147 aa4.34□□□□□ -1.71
AL136295.2-201ENST00000558478 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
AL136295.2-201ENST00000558478 USH2AO75445 5202 aa4.31□□□□□ -1.72
AL136295.2-201ENST00000558478 FCGBPQ9Y6R7 5405 aaPredicted RBP4.26□□□□□ -1.73
AL136295.2-201ENST00000558478 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
AL136295.2-201ENST00000558478 C10orf95Q9H7T3 257 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms