RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 TP53AIP1Q9HCN2 124 aa4.19□□□□□ -1.74
TPM1-213ENST00000558400 FCGBPQ9Y6R7 5405 aaPredicted RBP4.19□□□□□ -1.74
TPM1-213ENST00000558400 FLGP20930 4061 aaPredicted RBP4.18□□□□□ -1.74
TPM1-213ENST00000558400 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
TPM1-213ENST00000558400 IGKV2-30P06310 120 aa4.18□□□□□ -1.74
TPM1-213ENST00000558400 ANAPC13Q9BS18 74 aa4.18□□□□□ -1.74
TPM1-213ENST00000558400 IMUPQ9GZP8 106 aa4.18□□□□□ -1.74
TPM1-213ENST00000558400 KRTAP9-8Q9BYQ0 159 aa4.17□□□□□ -1.74
TPM1-213ENST00000558400 USH2AO75445 5202 aa4.16□□□□□ -1.74
TPM1-213ENST00000558400 H1FX-AS1Q4G0G2 97 aa4.16□□□□□ -1.74
TPM1-213ENST00000558400 CCDC179H3BU77 68 aa4.12□□□□□ -1.75
TPM1-213ENST00000558400 ATOX1O00244 68 aa4.12□□□□□ -1.75
TPM1-213ENST00000558400 MT2AP02795 61 aa4.1□□□□□ -1.75
TPM1-213ENST00000558400 KRTAP10-10P60014 251 aa4.1□□□□□ -1.75
TPM1-213ENST00000558400 C4orf26Q17RF5 130 aa4.09□□□□□ -1.75
TPM1-213ENST00000558400 UQCRQO14949 82 aa4.07□□□□□ -1.76
TPM1-213ENST00000558400 TRAV22A0A0B4J277 110 aa4.06□□□□□ -1.76
TPM1-213ENST00000558400 MT1FP04733 61 aa4.06□□□□□ -1.76
TPM1-213ENST00000558400 COX7CP15954 63 aa4.06□□□□□ -1.76
TPM1-213ENST00000558400 SERP2Q8N6R1 65 aa4.06□□□□□ -1.76
TPM1-213ENST00000558400 C1orf64Q8NEQ6 169 aa4.06□□□□□ -1.76
TPM1-213ENST00000558400 CYP4F30PQ9H0H9 118 aa4.06□□□□□ -1.76
TPM1-213ENST00000558400 TRAV7A0A075B6U4 112 aa4.05□□□□□ -1.76
TPM1-213ENST00000558400 LOC101927531A0A1B0GV80 90 aa4.05□□□□□ -1.76
TPM1-213ENST00000558400 NEBP20929 6669 aa4.03□□□□□ -1.76
TPM1-213ENST00000558400 KRTAP6-3Q3LI67 103 aa4.03□□□□□ -1.76
TPM1-213ENST00000558400 OCR1Q9BZK8 76 aa4.03□□□□□ -1.76
TPM1-213ENST00000558400 CYSTM1Q9H1C7 97 aa4.03□□□□□ -1.76
TPM1-213ENST00000558400 CSAG1Q6PB30 78 aa4.02□□□□□ -1.77
TPM1-213ENST00000558400 C20orf197Q8N268 126 aa4.02□□□□□ -1.77
TPM1-213ENST00000558400 SMIM20Q8N5G0 67 aa4.02□□□□□ -1.77
TPM1-213ENST00000558400 SNURFQ9Y675 71 aa4.02□□□□□ -1.77
TPM1-213ENST00000558400 S4R3F8 94 aa4.01□□□□□ -1.77
TPM1-213ENST00000558400 H0Y9P7 68 aa4□□□□□ -1.77
TPM1-213ENST00000558400 MP68P56378 58 aa3.98□□□□□ -1.77
TPM1-213ENST00000558400 C5orf47Q569G3 176 aa3.98□□□□□ -1.77
TPM1-213ENST00000558400 SVIPQ8NHG7 77 aa3.97□□□□□ -1.77
TPM1-213ENST00000558400 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
TPM1-213ENST00000558400 LCA10Q71F78 164 aa3.96□□□□□ -1.78
TPM1-213ENST00000558400 LINC00208Q96KT6 92 aa3.96□□□□□ -1.78
TPM1-213ENST00000558400 A8MUN3 132 aa3.95□□□□□ -1.78
TPM1-213ENST00000558400 H3BPC8 53 aa3.95□□□□□ -1.78
TPM1-213ENST00000558400 KLKP1Q107X0 134 aa3.93□□□□□ -1.78
TPM1-213ENST00000558400 NDUFC1O43677 76 aa3.92□□□□□ -1.78
TPM1-213ENST00000558400 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
TPM1-213ENST00000558400 H7BZZ5 65 aa3.91□□□□□ -1.78
TPM1-213ENST00000558400 KRTAP19-6Q3LI70 58 aa3.91□□□□□ -1.78
TPM1-213ENST00000558400 TMEM258P61165 79 aa3.9□□□□□ -1.79
TPM1-213ENST00000558400 CRIPTQ9P021 101 aa3.87□□□□□ -1.79
TPM1-213ENST00000558400 MUC12Q9UKN1 5478 aa3.85□□□□□ -1.79
TPM1-213ENST00000558400 KRTAP23-1A1A580 65 aa3.85□□□□□ -1.79
TPM1-213ENST00000558400 H0YAA0 97 aa3.85□□□□□ -1.79
TPM1-213ENST00000558400 SPRR2GQ9BYE4 73 aa3.84□□□□□ -1.79
TPM1-213ENST00000558400 ATP5EP56381 51 aaPredicted RBP3.82□□□□□ -1.8
TPM1-213ENST00000558400 Q5VV11 94 aa3.81□□□□□ -1.8
TPM1-213ENST00000558400 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
TPM1-213ENST00000558400 ACYP2P14621 99 aa3.79□□□□□ -1.8
TPM1-213ENST00000558400 KRTAP19-8Q3LI54 63 aa3.79□□□□□ -1.8
TPM1-213ENST00000558400 SERP1Q9Y6X1 66 aa3.79□□□□□ -1.8
TPM1-213ENST00000558400 ADM2Q7Z4H4 148 aa3.77□□□□□ -1.81
TPM1-213ENST00000558400 SPANXA2-OT1Q8N9U9 137 aa3.77□□□□□ -1.81
TPM1-213ENST00000558400 MT1BP07438 61 aa3.75□□□□□ -1.81
TPM1-213ENST00000558400 SPTSSBQ8NFR3 76 aa3.75□□□□□ -1.81
TPM1-213ENST00000558400 A6NN06 94 aa3.73□□□□□ -1.81
TPM1-213ENST00000558400 COA5Q86WW8 74 aa3.73□□□□□ -1.81
TPM1-213ENST00000558400 KRTAP2-3P0C7H8 128 aa3.71□□□□□ -1.82
TPM1-213ENST00000558400 RPS28P62857 69 aaKnown RBP3.71□□□□□ -1.82
TPM1-213ENST00000558400 KRTAP2-4Q9BYR9 128 aa3.71□□□□□ -1.82
TPM1-213ENST00000558400 CHKB-CPT1BH3BT56 60 aa3.7□□□□□ -1.82
TPM1-213ENST00000558400 R4GN34 69 aa3.7□□□□□ -1.82
TPM1-213ENST00000558400 KMT2DO14686 5537 aa3.68□□□□□ -1.82
TPM1-213ENST00000558400 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
TPM1-213ENST00000558400 SMIM26A0A096LP01 95 aa3.67□□□□□ -1.82
TPM1-213ENST00000558400 P0C880 135 aa3.67□□□□□ -1.82
TPM1-213ENST00000558400 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
TPM1-213ENST00000558400 PLAC4Q8WY50 150 aa3.67□□□□□ -1.82
TPM1-213ENST00000558400 M0QZ58 72 aa3.65□□□□□ -1.83
TPM1-213ENST00000558400 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
TPM1-213ENST00000558400 MDN1Q9NU22 5596 aa3.63□□□□□ -1.83
TPM1-213ENST00000558400 PRR15LQ9BU68 103 aa3.6□□□□□ -1.83
TPM1-213ENST00000558400 PSPHP1O15172 72 aa3.59□□□□□ -1.83
TPM1-213ENST00000558400 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
TPM1-213ENST00000558400 Q1T7F1 81 aa3.58□□□□□ -1.84
TPM1-213ENST00000558400 LINC01554Q52M75 96 aa3.58□□□□□ -1.84
TPM1-213ENST00000558400 KRTAP2-2Q9BYT5 123 aa3.57□□□□□ -1.84
TPM1-213ENST00000558400 KRTAP2-1Q9BYU5 128 aa3.57□□□□□ -1.84
TPM1-213ENST00000558400 SEC61GP60059 68 aa3.55□□□□□ -1.84
TPM1-213ENST00000558400 V9GYY9 64 aa3.55□□□□□ -1.84
TPM1-213ENST00000558400 MT1XP80297 61 aa3.54□□□□□ -1.84
TPM1-213ENST00000558400 LINC01558Q9Y6Z2 57 aa3.54□□□□□ -1.84
TPM1-213ENST00000558400 A0A1B0GU69 56 aa3.51□□□□□ -1.85
TPM1-213ENST00000558400 SPRR2EP22531 72 aa3.49□□□□□ -1.85
TPM1-213ENST00000558400 SPRR2BP35325 72 aa3.49□□□□□ -1.85
TPM1-213ENST00000558400 SPRR2AP35326 72 aa3.49□□□□□ -1.85
TPM1-213ENST00000558400 LCE1AQ5T7P2 110 aa3.49□□□□□ -1.85
TPM1-213ENST00000558400 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
TPM1-213ENST00000558400 A6NED7 52 aa3.47□□□□□ -1.85
TPM1-213ENST00000558400 BRK1Q8WUW1 75 aa3.47□□□□□ -1.85
TPM1-213ENST00000558400 A0A1B0GU33 70 aa3.44□□□□□ -1.86
TPM1-213ENST00000558400 A8MU10 97 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms