RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 OCR1Q9BZK8 76 aa3.96□□□□□ -1.78
PSEN1-222ENST00000557356 CYSTM1Q9H1C7 97 aa3.96□□□□□ -1.78
PSEN1-222ENST00000557356 FAT4Q6V0I7 4981 aa3.94□□□□□ -1.78
PSEN1-222ENST00000557356 HCG22E2RYF7 251 aa3.94□□□□□ -1.78
PSEN1-222ENST00000557356 Q8N9L7 120 aa3.94□□□□□ -1.78
PSEN1-222ENST00000557356 TP53AIP1Q9HCN2 124 aa3.93□□□□□ -1.78
PSEN1-222ENST00000557356 C5orf47Q569G3 176 aa3.92□□□□□ -1.78
PSEN1-222ENST00000557356 C7orf65Q6ZTY9 151 aa3.92□□□□□ -1.78
PSEN1-222ENST00000557356 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
PSEN1-222ENST00000557356 SMIM26A0A096LP01 95 aa3.9□□□□□ -1.79
PSEN1-222ENST00000557356 IGKV2-30P06310 120 aa3.9□□□□□ -1.79
PSEN1-222ENST00000557356 KRTAP4-9Q9BYQ8 210 aa3.9□□□□□ -1.79
PSEN1-222ENST00000557356 SNURFQ9Y675 71 aa3.9□□□□□ -1.79
PSEN1-222ENST00000557356 KRTAP9-7A8MTY7 169 aa3.89□□□□□ -1.79
PSEN1-222ENST00000557356 H3BPC8 53 aa3.89□□□□□ -1.79
PSEN1-222ENST00000557356 Q5W150 140 aa3.88□□□□□ -1.79
PSEN1-222ENST00000557356 H1FX-AS1Q4G0G2 97 aa3.87□□□□□ -1.79
PSEN1-222ENST00000557356 MP68P56378 58 aa3.86□□□□□ -1.79
PSEN1-222ENST00000557356 KRTAP9-8Q9BYQ0 159 aa3.85□□□□□ -1.79
PSEN1-222ENST00000557356 CYP4F30PQ9H0H9 118 aa3.84□□□□□ -1.79
PSEN1-222ENST00000557356 SPANXA2-OT1Q8N9U9 137 aa3.82□□□□□ -1.8
PSEN1-222ENST00000557356 TRAV22A0A0B4J277 110 aa3.81□□□□□ -1.8
PSEN1-222ENST00000557356 KRTAP10-10P60014 251 aa3.81□□□□□ -1.8
PSEN1-222ENST00000557356 C4orf26Q17RF5 130 aa3.81□□□□□ -1.8
PSEN1-222ENST00000557356 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
PSEN1-222ENST00000557356 LOC101927531A0A1B0GV80 90 aa3.8□□□□□ -1.8
PSEN1-222ENST00000557356 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
PSEN1-222ENST00000557356 MT2AP02795 61 aa3.79□□□□□ -1.8
PSEN1-222ENST00000557356 H0Y9P7 68 aa3.78□□□□□ -1.8
PSEN1-222ENST00000557356 C1orf64Q8NEQ6 169 aa3.78□□□□□ -1.8
PSEN1-222ENST00000557356 V9GYY9 64 aa3.78□□□□□ -1.8
PSEN1-222ENST00000557356 Q1T7F1 81 aa3.77□□□□□ -1.81
PSEN1-222ENST00000557356 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
PSEN1-222ENST00000557356 LINC00208Q96KT6 92 aa3.76□□□□□ -1.81
PSEN1-222ENST00000557356 MT1FP04733 61 aa3.75□□□□□ -1.81
PSEN1-222ENST00000557356 LCE5AQ5TCM9 118 aa3.75□□□□□ -1.81
PSEN1-222ENST00000557356 CSAG1Q6PB30 78 aa3.75□□□□□ -1.81
PSEN1-222ENST00000557356 PRO0628Q9UI54 55 aa3.75□□□□□ -1.81
PSEN1-222ENST00000557356 KRTAP9-3Q9BYQ3 159 aa3.74□□□□□ -1.81
PSEN1-222ENST00000557356 S4R3F8 94 aa3.74□□□□□ -1.81
PSEN1-222ENST00000557356 FLGP20930 4061 aaPredicted RBP3.73□□□□□ -1.81
PSEN1-222ENST00000557356 KRTAP3-1Q9BYR8 98 aa3.71□□□□□ -1.82
PSEN1-222ENST00000557356 A8MUN3 132 aa3.7□□□□□ -1.82
PSEN1-222ENST00000557356 LCA10Q71F78 164 aa3.68□□□□□ -1.82
PSEN1-222ENST00000557356 COA5Q86WW8 74 aa3.65□□□□□ -1.83
PSEN1-222ENST00000557356 BRK1Q8WUW1 75 aa3.65□□□□□ -1.83
PSEN1-222ENST00000557356 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
PSEN1-222ENST00000557356 LINC01558Q9Y6Z2 57 aa3.62□□□□□ -1.83
PSEN1-222ENST00000557356 CRIPTQ9P021 101 aa3.61□□□□□ -1.83
PSEN1-222ENST00000557356 H0YAA0 97 aa3.6□□□□□ -1.83
PSEN1-222ENST00000557356 PSPHP1O15172 72 aa3.6□□□□□ -1.83
PSEN1-222ENST00000557356 ACYP2P14621 99 aa3.6□□□□□ -1.83
PSEN1-222ENST00000557356 Q5VV11 94 aa3.6□□□□□ -1.83
PSEN1-222ENST00000557356 DMAC1Q96GE9 116 aa3.58□□□□□ -1.84
PSEN1-222ENST00000557356 PRR15LQ9BU68 103 aa3.58□□□□□ -1.84
PSEN1-222ENST00000557356 CHKB-CPT1BH3BT56 60 aa3.57□□□□□ -1.84
PSEN1-222ENST00000557356 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
PSEN1-222ENST00000557356 SPRR2GQ9BYE4 73 aa3.57□□□□□ -1.84
PSEN1-222ENST00000557356 SPTSSBQ8NFR3 76 aa3.54□□□□□ -1.84
PSEN1-222ENST00000557356 CDC42SE1Q9NRR8 79 aa3.53□□□□□ -1.84
PSEN1-222ENST00000557356 A6NED7 52 aa3.52□□□□□ -1.85
PSEN1-222ENST00000557356 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
PSEN1-222ENST00000557356 ADM2Q7Z4H4 148 aa3.51□□□□□ -1.85
PSEN1-222ENST00000557356 PMAIP1Q13794 54 aa3.5□□□□□ -1.85
PSEN1-222ENST00000557356 USH2AO75445 5202 aa3.48□□□□□ -1.85
PSEN1-222ENST00000557356 A6NN06 94 aa3.47□□□□□ -1.85
PSEN1-222ENST00000557356 A0A1B0GU69 56 aa3.46□□□□□ -1.86
PSEN1-222ENST00000557356 MT1BP07438 61 aa3.46□□□□□ -1.86
PSEN1-222ENST00000557356 R4GN34 69 aa3.46□□□□□ -1.86
PSEN1-222ENST00000557356 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
PSEN1-222ENST00000557356 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
PSEN1-222ENST00000557356 PLAC4Q8WY50 150 aa3.43□□□□□ -1.86
PSEN1-222ENST00000557356 UQCR11O14957 56 aa3.42□□□□□ -1.86
PSEN1-222ENST00000557356 P0C880 135 aa3.41□□□□□ -1.86
PSEN1-222ENST00000557356 KRTAP10-5P60370 271 aa3.41□□□□□ -1.86
PSEN1-222ENST00000557356 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
PSEN1-222ENST00000557356 A8MU10 97 aa3.4□□□□□ -1.87
PSEN1-222ENST00000557356 M0QZ58 72 aa3.4□□□□□ -1.87
PSEN1-222ENST00000557356 SEC61GP60059 68 aa3.4□□□□□ -1.87
PSEN1-222ENST00000557356 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
PSEN1-222ENST00000557356 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.87
PSEN1-222ENST00000557356 MIR22HGQ0VDD5 57 aa3.39□□□□□ -1.87
PSEN1-222ENST00000557356 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
PSEN1-222ENST00000557356 LINC01554Q52M75 96 aa3.34□□□□□ -1.87
PSEN1-222ENST00000557356 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
PSEN1-222ENST00000557356 A0A1B0GU33 70 aa3.28□□□□□ -1.88
PSEN1-222ENST00000557356 KRTAP23-1A1A580 65 aa3.28□□□□□ -1.88
PSEN1-222ENST00000557356 MT1XP80297 61 aa3.27□□□□□ -1.89
PSEN1-222ENST00000557356 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
PSEN1-222ENST00000557356 K7ERS5 55 aa3.24□□□□□ -1.89
PSEN1-222ENST00000557356 KRTAP12-2P59991 146 aa3.24□□□□□ -1.89
PSEN1-222ENST00000557356 KRTAP15-1Q3LI76 137 aa3.23□□□□□ -1.89
PSEN1-222ENST00000557356 KRTAP5-9P26371 169 aa3.22□□□□□ -1.89
PSEN1-222ENST00000557356 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
PSEN1-222ENST00000557356 SYNE2Q8WXH0 6885 aaKnown RBP3.19□□□□□ -1.9
PSEN1-222ENST00000557356 KRTAP13-4Q3LI77 160 aa3.18□□□□□ -1.9
PSEN1-222ENST00000557356 KRTAP8-1Q8IUC2 63 aa3.18□□□□□ -1.9
PSEN1-222ENST00000557356 PRAC1Q96KF2 57 aa3.17□□□□□ -1.9
PSEN1-222ENST00000557356 A0A0D9SG42 100 aa3.15□□□□□ -1.91
PSEN1-222ENST00000557356 SPRR2FQ96RM1 72 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms