RNA–Protein interactions for RNA: ENST00000556707.5

SDR39U1-221, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 1,196 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-221ENST00000556707 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
SDR39U1-221ENST00000556707 USH2AO75445 5202 aa11.44□□□□□ -0.58
SDR39U1-221ENST00000556707 A8MUN3 132 aa11.44□□□□□ -0.58
SDR39U1-221ENST00000556707 SMIM20Q8N5G0 67 aa11.42□□□□□ -0.58
SDR39U1-221ENST00000556707 TRAV7A0A075B6U4 112 aa11.39□□□□□ -0.59
SDR39U1-221ENST00000556707 NDUFC1O43677 76 aa11.31□□□□□ -0.6
SDR39U1-221ENST00000556707 SSPOA2VEC9 5147 aa11.26□□□□□ -0.61
SDR39U1-221ENST00000556707 DMAC1Q96GE9 116 aa11.24□□□□□ -0.61
SDR39U1-221ENST00000556707 KRTAP19-1Q8IUB9 90 aa11.17□□□□□ -0.62
SDR39U1-221ENST00000556707 SERP2Q8N6R1 65 aa11.14□□□□□ -0.63
SDR39U1-221ENST00000556707 H0YAA0 97 aa11.13□□□□□ -0.63
SDR39U1-221ENST00000556707 SNURFQ9Y675 71 aa11.11□□□□□ -0.63
SDR39U1-221ENST00000556707 SPRR2GQ9BYE4 73 aa11.08□□□□□ -0.64
SDR39U1-221ENST00000556707 C20orf197Q8N268 126 aa11.05□□□□□ -0.64
SDR39U1-221ENST00000556707 ACYP2P14621 99 aa11.04□□□□□ -0.64
SDR39U1-221ENST00000556707 KRTAP19-6Q3LI70 58 aa11.03□□□□□ -0.64
SDR39U1-221ENST00000556707 CRIPTQ9P021 101 aa11.03□□□□□ -0.64
SDR39U1-221ENST00000556707 ADM2Q7Z4H4 148 aa11□□□□□ -0.65
SDR39U1-221ENST00000556707 FCGBPQ9Y6R7 5405 aaPredicted RBP10.99□□□□□ -0.65
SDR39U1-221ENST00000556707 KRTAP19-8Q3LI54 63 aa10.97□□□□□ -0.65
SDR39U1-221ENST00000556707 SPANXA2-OT1Q8N9U9 137 aa10.94□□□□□ -0.66
SDR39U1-221ENST00000556707 Q5VV11 94 aa10.92□□□□□ -0.66
SDR39U1-221ENST00000556707 MT1BP07438 61 aa10.91□□□□□ -0.66
SDR39U1-221ENST00000556707 COX7CP15954 63 aa10.88□□□□□ -0.67
SDR39U1-221ENST00000556707 SPTSSBQ8NFR3 76 aa10.83□□□□□ -0.68
SDR39U1-221ENST00000556707 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.82□□□□□ -0.68
SDR39U1-221ENST00000556707 CHKB-CPT1BH3BT56 60 aa10.82□□□□□ -0.68
SDR39U1-221ENST00000556707 P0C880 135 aa10.81□□□□□ -0.68
SDR39U1-221ENST00000556707 KRTAP3-2Q9BYR7 98 aa10.78□□□□□ -0.68
SDR39U1-221ENST00000556707 R4GN34 69 aa10.7□□□□□ -0.7
SDR39U1-221ENST00000556707 ANAPC13Q9BS18 74 aa10.67□□□□□ -0.7
SDR39U1-221ENST00000556707 H7BZZ5 65 aa10.65□□□□□ -0.7
SDR39U1-221ENST00000556707 CYSTM1Q9H1C7 97 aa10.65□□□□□ -0.7
SDR39U1-221ENST00000556707 A6NN06 94 aa10.64□□□□□ -0.71
SDR39U1-221ENST00000556707 M0QZ58 72 aa10.63□□□□□ -0.71
SDR39U1-221ENST00000556707 COA5Q86WW8 74 aa10.6□□□□□ -0.71
SDR39U1-221ENST00000556707 KRTAP10-5P60370 271 aa10.59□□□□□ -0.71
SDR39U1-221ENST00000556707 KRTAP9-7A8MTY7 169 aa10.57□□□□□ -0.72
SDR39U1-221ENST00000556707 PLAC4Q8WY50 150 aa10.47□□□□□ -0.73
SDR39U1-221ENST00000556707 MACF1Q9UPN3 7388 aaKnown RBP10.46□□□□□ -0.73
SDR39U1-221ENST00000556707 CCDC179H3BU77 68 aa10.45□□□□□ -0.74
SDR39U1-221ENST00000556707 LINC01554Q52M75 96 aa10.45□□□□□ -0.74
SDR39U1-221ENST00000556707 MT1XP80297 61 aa10.32□□□□□ -0.76
SDR39U1-221ENST00000556707 PRO2289Q9P1D8 64 aa10.32□□□□□ -0.76
SDR39U1-221ENST00000556707 SEC61GP60059 68 aa10.28□□□□□ -0.76
SDR39U1-221ENST00000556707 SERP1Q9Y6X1 66 aa10.26□□□□□ -0.77
SDR39U1-221ENST00000556707 SYNE2Q8WXH0 6885 aaKnown RBP10.24□□□□□ -0.77
SDR39U1-221ENST00000556707 KRTAP6-3Q3LI67 103 aa10.24□□□□□ -0.77
SDR39U1-221ENST00000556707 KRTAP13-4Q3LI77 160 aa10.24□□□□□ -0.77
SDR39U1-221ENST00000556707 ATP5EP56381 51 aaPredicted RBP10.23□□□□□ -0.77
SDR39U1-221ENST00000556707 PCP4P48539 62 aa10.12□□□□□ -0.79
SDR39U1-221ENST00000556707 TMEM258P61165 79 aa10.09□□□□□ -0.79
SDR39U1-221ENST00000556707 A0A1B0GU33 70 aa10.08□□□□□ -0.8
SDR39U1-221ENST00000556707 A0A1B0GU69 56 aa10.04□□□□□ -0.8
SDR39U1-221ENST00000556707 KRTAP12-2P59991 146 aa10□□□□□ -0.81
SDR39U1-221ENST00000556707 SPATA8Q6RVD6 105 aa10□□□□□ -0.81
SDR39U1-221ENST00000556707 A0A0D9SG42 100 aa9.95□□□□□ -0.82
SDR39U1-221ENST00000556707 KRTAP5-9P26371 169 aa9.92□□□□□ -0.82
SDR39U1-221ENST00000556707 CAMK2N1Q7Z7J9 78 aa9.89□□□□□ -0.83
SDR39U1-221ENST00000556707 KMT2DO14686 5537 aa9.87□□□□□ -0.83
SDR39U1-221ENST00000556707 KRTAP10-7P60409 375 aaPredicted RBP9.85□□□□□ -0.83
SDR39U1-221ENST00000556707 PRR15LQ9BU68 103 aa9.85□□□□□ -0.83
SDR39U1-221ENST00000556707 LINC01558Q9Y6Z2 57 aa9.85□□□□□ -0.83
SDR39U1-221ENST00000556707 SMIM26A0A096LP01 95 aa9.8□□□□□ -0.84
SDR39U1-221ENST00000556707 KRTAP10-12P60413 245 aa9.8□□□□□ -0.84
SDR39U1-221ENST00000556707 SPINT4Q6UDR6 99 aa9.79□□□□□ -0.84
SDR39U1-221ENST00000556707 KRTAP12-1P59990 96 aa9.78□□□□□ -0.84
SDR39U1-221ENST00000556707 KRTAP8-1Q8IUC2 63 aa9.78□□□□□ -0.84
SDR39U1-221ENST00000556707 MUC12Q9UKN1 5478 aa9.77□□□□□ -0.85
SDR39U1-221ENST00000556707 KRTAP4-8A0A0G2JLE6 195 aa9.74□□□□□ -0.85
SDR39U1-221ENST00000556707 KRTAP4-8Q9BYQ9 185 aa9.74□□□□□ -0.85
SDR39U1-221ENST00000556707 A8MU10 97 aa9.7□□□□□ -0.86
SDR39U1-221ENST00000556707 SPRR2FQ96RM1 72 aa9.7□□□□□ -0.86
SDR39U1-221ENST00000556707 NEBP20929 6669 aa9.61□□□□□ -0.87
SDR39U1-221ENST00000556707 MDN1Q9NU22 5596 aa9.57□□□□□ -0.88
SDR39U1-221ENST00000556707 UQCR11O14957 56 aa9.54□□□□□ -0.88
SDR39U1-221ENST00000556707 SPRR2EP22531 72 aa9.48□□□□□ -0.89
SDR39U1-221ENST00000556707 SPRR2BP35325 72 aa9.48□□□□□ -0.89
SDR39U1-221ENST00000556707 SPRR2AP35326 72 aa9.48□□□□□ -0.89
SDR39U1-221ENST00000556707 V9GYY9 64 aa9.48□□□□□ -0.89
SDR39U1-221ENST00000556707 Q1T7F1 81 aa9.44□□□□□ -0.9
SDR39U1-221ENST00000556707 LCE1AQ5T7P2 110 aa9.41□□□□□ -0.9
SDR39U1-221ENST00000556707 PSPHP1O15172 72 aa9.36□□□□□ -0.91
SDR39U1-221ENST00000556707 MIR22HGQ0VDD5 57 aa9.35□□□□□ -0.91
SDR39U1-221ENST00000556707 C10orf95Q9H7T3 257 aa9.32□□□□□ -0.92
SDR39U1-221ENST00000556707 RPS28P62857 69 aaKnown RBP9.31□□□□□ -0.92
SDR39U1-221ENST00000556707 KRTAP20-1Q3LI63 56 aa9.31□□□□□ -0.92
SDR39U1-221ENST00000556707 TNP1P09430 55 aa9.22□□□□□ -0.93
SDR39U1-221ENST00000556707 KRTAP19-7Q3SYF9 63 aa9.22□□□□□ -0.93
SDR39U1-221ENST00000556707 KRTAP2-3P0C7H8 128 aa9.17□□□□□ -0.94
SDR39U1-221ENST00000556707 KRTAP2-4Q9BYR9 128 aa9.17□□□□□ -0.94
SDR39U1-221ENST00000556707 SPRR2DP22532 72 aa9.15□□□□□ -0.94
SDR39U1-221ENST00000556707 K7ERS5 55 aa9.11□□□□□ -0.95
SDR39U1-221ENST00000556707 MT1EP04732 61 aa9.11□□□□□ -0.95
SDR39U1-221ENST00000556707 A6NED7 52 aa9.07□□□□□ -0.96
SDR39U1-221ENST00000556707 KRTAP19-5Q3LI72 72 aa9.07□□□□□ -0.96
SDR39U1-221ENST00000556707 LCE3AQ5TA76 89 aa9.04□□□□□ -0.96
SDR39U1-221ENST00000556707 KRTAP19-3Q7Z4W3 81 aa8.97□□□□□ -0.97
SDR39U1-221ENST00000556707 LCE5AQ5TCM9 118 aa8.95□□□□□ -0.98
SDR39U1-221ENST00000556707 KRTAP2-2Q9BYT5 123 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 438.2 ms