RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 C5orf47Q569G3 176 aa3.88□□□□□ -1.79
TDP1-214ENST00000556063 MPLKIPQ8TAP9 179 aa3.88□□□□□ -1.79
TDP1-214ENST00000556063 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
TDP1-214ENST00000556063 H3BPC8 53 aa3.86□□□□□ -1.79
TDP1-214ENST00000556063 CYP4F30PQ9H0H9 118 aa3.86□□□□□ -1.79
TDP1-214ENST00000556063 C1orf64Q8NEQ6 169 aa3.85□□□□□ -1.79
TDP1-214ENST00000556063 LINC00208Q96KT6 92 aa3.85□□□□□ -1.79
TDP1-214ENST00000556063 TRAV7A0A075B6U4 112 aa3.84□□□□□ -1.79
TDP1-214ENST00000556063 H3BS24 57 aa3.83□□□□□ -1.8
TDP1-214ENST00000556063 M0R2T5 61 aa3.83□□□□□ -1.8
TDP1-214ENST00000556063 C4orf26Q17RF5 130 aa3.83□□□□□ -1.8
TDP1-214ENST00000556063 MUC2Q02817 5179 aa3.82□□□□□ -1.8
TDP1-214ENST00000556063 MT1HP80294 61 aa3.81□□□□□ -1.8
TDP1-214ENST00000556063 H1FX-AS1Q4G0G2 97 aa3.81□□□□□ -1.8
TDP1-214ENST00000556063 SERP2Q8N6R1 65 aa3.79□□□□□ -1.8
TDP1-214ENST00000556063 A8MUN3 132 aa3.76□□□□□ -1.81
TDP1-214ENST00000556063 KLKP1Q107X0 134 aa3.75□□□□□ -1.81
TDP1-214ENST00000556063 FAT4Q6V0I7 4981 aa3.74□□□□□ -1.81
TDP1-214ENST00000556063 C20orf197Q8N268 126 aa3.74□□□□□ -1.81
TDP1-214ENST00000556063 COX7CP15954 63 aa3.73□□□□□ -1.81
TDP1-214ENST00000556063 KRTAP3-1Q9BYR8 98 aa3.73□□□□□ -1.81
TDP1-214ENST00000556063 KRTAP10-6P60371 365 aaPredicted RBP3.72□□□□□ -1.81
TDP1-214ENST00000556063 ANAPC13Q9BS18 74 aa3.72□□□□□ -1.81
TDP1-214ENST00000556063 SNURFQ9Y675 71 aa3.72□□□□□ -1.81
TDP1-214ENST00000556063 S4R3F8 94 aa3.72□□□□□ -1.81
TDP1-214ENST00000556063 CSAG1Q6PB30 78 aa3.7□□□□□ -1.82
TDP1-214ENST00000556063 DMAC1Q96GE9 116 aa3.69□□□□□ -1.82
TDP1-214ENST00000556063 FLGP20930 4061 aaPredicted RBP3.69□□□□□ -1.82
TDP1-214ENST00000556063 NDUFC1O43677 76 aa3.68□□□□□ -1.82
TDP1-214ENST00000556063 ACYP2P14621 99 aa3.67□□□□□ -1.82
TDP1-214ENST00000556063 LCA10Q71F78 164 aa3.67□□□□□ -1.82
TDP1-214ENST00000556063 SPANXA2-OT1Q8N9U9 137 aa3.67□□□□□ -1.82
TDP1-214ENST00000556063 CHKB-CPT1BH3BT56 60 aa3.62□□□□□ -1.83
TDP1-214ENST00000556063 KRTAP10-10P60014 251 aa3.62□□□□□ -1.83
TDP1-214ENST00000556063 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
TDP1-214ENST00000556063 MT2AP02795 61 aa3.61□□□□□ -1.83
TDP1-214ENST00000556063 SEC61GP60059 68 aa3.61□□□□□ -1.83
TDP1-214ENST00000556063 H7BZZ5 65 aa3.6□□□□□ -1.83
TDP1-214ENST00000556063 A0A0A0MQY5 61 aa3.59□□□□□ -1.83
TDP1-214ENST00000556063 CCDC179H3BU77 68 aa3.59□□□□□ -1.83
TDP1-214ENST00000556063 H0YAA0 97 aa3.57□□□□□ -1.84
TDP1-214ENST00000556063 MT1FP04733 61 aa3.57□□□□□ -1.84
TDP1-214ENST00000556063 CYSTM1Q9H1C7 97 aa3.56□□□□□ -1.84
TDP1-214ENST00000556063 ATP5EP56381 51 aaPredicted RBP3.55□□□□□ -1.84
TDP1-214ENST00000556063 COA5Q86WW8 74 aa3.54□□□□□ -1.84
TDP1-214ENST00000556063 TMEM258P61165 79 aa3.52□□□□□ -1.85
TDP1-214ENST00000556063 ADM2Q7Z4H4 148 aa3.52□□□□□ -1.85
TDP1-214ENST00000556063 CRIPTQ9P021 101 aa3.52□□□□□ -1.85
TDP1-214ENST00000556063 SPRR2GQ9BYE4 73 aa3.45□□□□□ -1.86
TDP1-214ENST00000556063 P0C880 135 aa3.44□□□□□ -1.86
TDP1-214ENST00000556063 SERP1Q9Y6X1 66 aa3.44□□□□□ -1.86
TDP1-214ENST00000556063 R4GN34 69 aa3.44□□□□□ -1.86
TDP1-214ENST00000556063 FSIP2Q5CZC0 6907 aa3.42□□□□□ -1.86
TDP1-214ENST00000556063 M0QZ58 72 aa3.41□□□□□ -1.86
TDP1-214ENST00000556063 Q5VV11 94 aa3.41□□□□□ -1.86
TDP1-214ENST00000556063 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
TDP1-214ENST00000556063 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
TDP1-214ENST00000556063 KRTAP19-8Q3LI54 63 aa3.39□□□□□ -1.87
TDP1-214ENST00000556063 A0A1B0GU69 56 aa3.38□□□□□ -1.87
TDP1-214ENST00000556063 PRR15LQ9BU68 103 aa3.37□□□□□ -1.87
TDP1-214ENST00000556063 V9GYY9 64 aa3.36□□□□□ -1.87
TDP1-214ENST00000556063 A0A1B0GU33 70 aa3.35□□□□□ -1.87
TDP1-214ENST00000556063 LINC01554Q52M75 96 aa3.35□□□□□ -1.87
TDP1-214ENST00000556063 KRTAP23-1A1A580 65 aa3.34□□□□□ -1.87
TDP1-214ENST00000556063 MT1BP07438 61 aa3.34□□□□□ -1.87
TDP1-214ENST00000556063 PLAC4Q8WY50 150 aa3.34□□□□□ -1.87
TDP1-214ENST00000556063 LINC01558Q9Y6Z2 57 aa3.34□□□□□ -1.87
TDP1-214ENST00000556063 KRTAP19-6Q3LI70 58 aa3.32□□□□□ -1.88
TDP1-214ENST00000556063 SMIM26A0A096LP01 95 aa3.3□□□□□ -1.88
TDP1-214ENST00000556063 RPS28P62857 69 aaKnown RBP3.3□□□□□ -1.88
TDP1-214ENST00000556063 A6NN06 94 aa3.29□□□□□ -1.88
TDP1-214ENST00000556063 USH2AO75445 5202 aa3.28□□□□□ -1.88
TDP1-214ENST00000556063 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
TDP1-214ENST00000556063 PRO2289Q9P1D8 64 aa3.27□□□□□ -1.89
TDP1-214ENST00000556063 Q1T7F1 81 aa3.26□□□□□ -1.89
TDP1-214ENST00000556063 SPATA8Q6RVD6 105 aa3.26□□□□□ -1.89
TDP1-214ENST00000556063 A0A0D9SG42 100 aa3.25□□□□□ -1.89
TDP1-214ENST00000556063 SSPOA2VEC9 5147 aa3.25□□□□□ -1.89
TDP1-214ENST00000556063 UQCR11O14957 56 aa3.24□□□□□ -1.89
TDP1-214ENST00000556063 KRTAP10-5P60370 271 aa3.24□□□□□ -1.89
TDP1-214ENST00000556063 PSPHP1O15172 72 aa3.21□□□□□ -1.9
TDP1-214ENST00000556063 CAMK2N1Q7Z7J9 78 aa3.21□□□□□ -1.9
TDP1-214ENST00000556063 SPINT4Q6UDR6 99 aa3.2□□□□□ -1.9
TDP1-214ENST00000556063 MT1XP80297 61 aa3.18□□□□□ -1.9
TDP1-214ENST00000556063 MIR22HGQ0VDD5 57 aa3.18□□□□□ -1.9
TDP1-214ENST00000556063 A8MU10 97 aa3.17□□□□□ -1.9
TDP1-214ENST00000556063 KRTAP12-1P59990 96 aa3.17□□□□□ -1.9
TDP1-214ENST00000556063 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
TDP1-214ENST00000556063 A6NED7 52 aa3.15□□□□□ -1.91
TDP1-214ENST00000556063 K7ERS5 55 aa3.14□□□□□ -1.91
TDP1-214ENST00000556063 KRTAP12-2P59991 146 aa3.13□□□□□ -1.91
TDP1-214ENST00000556063 KRTAP5-11Q6L8G4 156 aa3.12□□□□□ -1.91
TDP1-214ENST00000556063 PRO0628Q9UI54 55 aa3.09□□□□□ -1.91
TDP1-214ENST00000556063 MACF1Q9UPN3 7388 aaKnown RBP3.07□□□□□ -1.92
TDP1-214ENST00000556063 SYNE2Q8WXH0 6885 aaKnown RBP3.06□□□□□ -1.92
TDP1-214ENST00000556063 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
TDP1-214ENST00000556063 KRTAP10-7P60409 375 aaPredicted RBP3.03□□□□□ -1.92
TDP1-214ENST00000556063 KRTAP10-12P60413 245 aa3.03□□□□□ -1.92
TDP1-214ENST00000556063 KRTAP6-3Q3LI67 103 aa3.03□□□□□ -1.92
TDP1-214ENST00000556063 TNP1P09430 55 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms