RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 A0A0U1RQV1 116 aa5.7□□□□□ -1.5
TMEM260-208ENST00000555905 C20orf197Q8N268 126 aa5.7□□□□□ -1.5
TMEM260-208ENST00000555905 SNURFQ9Y675 71 aa5.68□□□□□ -1.5
TMEM260-208ENST00000555905 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
TMEM260-208ENST00000555905 HRES1P13985 223 aa5.66□□□□□ -1.5
TMEM260-208ENST00000555905 KLKP1Q107X0 134 aa5.65□□□□□ -1.5
TMEM260-208ENST00000555905 RBM12B-AS1Q9P1G2 102 aa5.65□□□□□ -1.5
TMEM260-208ENST00000555905 KRTAP23-1A1A580 65 aa5.64□□□□□ -1.51
TMEM260-208ENST00000555905 CCDC179H3BU77 68 aa5.62□□□□□ -1.51
TMEM260-208ENST00000555905 C4orf26Q17RF5 130 aa5.62□□□□□ -1.51
TMEM260-208ENST00000555905 MUC2Q02817 5179 aa5.61□□□□□ -1.51
TMEM260-208ENST00000555905 FAM236DA0A1B0GTK5 79 aa5.61□□□□□ -1.51
TMEM260-208ENST00000555905 NDUFC1O43677 76 aa5.61□□□□□ -1.51
TMEM260-208ENST00000555905 FAM236CP0DP71 79 aa5.61□□□□□ -1.51
TMEM260-208ENST00000555905 MPLKIPQ8TAP9 179 aa5.61□□□□□ -1.51
TMEM260-208ENST00000555905 COX6B2Q6YFQ2 88 aa5.58□□□□□ -1.52
TMEM260-208ENST00000555905 PCP4P48539 62 aa5.56□□□□□ -1.52
TMEM260-208ENST00000555905 CYSTM1Q9H1C7 97 aa5.55□□□□□ -1.52
TMEM260-208ENST00000555905 H7BZZ5 65 aa5.54□□□□□ -1.52
TMEM260-208ENST00000555905 SPANXA2-OT1Q8N9U9 137 aa5.54□□□□□ -1.52
TMEM260-208ENST00000555905 A8MUN3 132 aa5.53□□□□□ -1.52
TMEM260-208ENST00000555905 KRTAP19-2Q3LHN2 52 aa5.52□□□□□ -1.53
TMEM260-208ENST00000555905 H1FX-AS1Q4G0G2 97 aa5.52□□□□□ -1.53
TMEM260-208ENST00000555905 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
TMEM260-208ENST00000555905 ACYP2P14621 99 aa5.47□□□□□ -1.53
TMEM260-208ENST00000555905 ATP5EP56381 51 aaPredicted RBP5.45□□□□□ -1.54
TMEM260-208ENST00000555905 TMEM258P61165 79 aa5.45□□□□□ -1.54
TMEM260-208ENST00000555905 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
TMEM260-208ENST00000555905 S4R3F8 94 aa5.44□□□□□ -1.54
TMEM260-208ENST00000555905 FAT4Q6V0I7 4981 aa5.44□□□□□ -1.54
TMEM260-208ENST00000555905 FLGP20930 4061 aaPredicted RBP5.41□□□□□ -1.54
TMEM260-208ENST00000555905 MT1HP80294 61 aa5.4□□□□□ -1.54
TMEM260-208ENST00000555905 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
TMEM260-208ENST00000555905 CHKB-CPT1BH3BT56 60 aa5.39□□□□□ -1.55
TMEM260-208ENST00000555905 M0R2T5 61 aa5.39□□□□□ -1.55
TMEM260-208ENST00000555905 LCA10Q71F78 164 aa5.39□□□□□ -1.55
TMEM260-208ENST00000555905 COA5Q86WW8 74 aa5.36□□□□□ -1.55
TMEM260-208ENST00000555905 CSAG1Q6PB30 78 aa5.35□□□□□ -1.55
TMEM260-208ENST00000555905 SPTSSBQ8NFR3 76 aa5.34□□□□□ -1.55
TMEM260-208ENST00000555905 SERP1Q9Y6X1 66 aa5.28□□□□□ -1.56
TMEM260-208ENST00000555905 KRTAP9-8Q9BYQ0 159 aa5.26□□□□□ -1.57
TMEM260-208ENST00000555905 KRTAP10-6P60371 365 aaPredicted RBP5.24□□□□□ -1.57
TMEM260-208ENST00000555905 H0YAA0 97 aa5.19□□□□□ -1.58
TMEM260-208ENST00000555905 RPS28P62857 69 aaKnown RBP5.18□□□□□ -1.58
TMEM260-208ENST00000555905 SEC61GP60059 68 aa5.16□□□□□ -1.58
TMEM260-208ENST00000555905 ADM2Q7Z4H4 148 aa5.16□□□□□ -1.58
TMEM260-208ENST00000555905 MT2AP02795 61 aa5.14□□□□□ -1.59
TMEM260-208ENST00000555905 KRTAP10-10P60014 251 aa5.13□□□□□ -1.59
TMEM260-208ENST00000555905 SMIM26A0A096LP01 95 aa5.12□□□□□ -1.59
TMEM260-208ENST00000555905 A0A1B0GU69 56 aa5.1□□□□□ -1.59
TMEM260-208ENST00000555905 MT1FP04733 61 aa5.1□□□□□ -1.59
TMEM260-208ENST00000555905 LINC01558Q9Y6Z2 57 aa5.09□□□□□ -1.59
TMEM260-208ENST00000555905 V9GYY9 64 aa5.09□□□□□ -1.59
TMEM260-208ENST00000555905 P0C880 135 aa5.08□□□□□ -1.6
TMEM260-208ENST00000555905 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
TMEM260-208ENST00000555905 CRIPTQ9P021 101 aa5.06□□□□□ -1.6
TMEM260-208ENST00000555905 Q1T7F1 81 aa5.05□□□□□ -1.6
TMEM260-208ENST00000555905 R4GN34 69 aa5.01□□□□□ -1.61
TMEM260-208ENST00000555905 A0A1B0GU33 70 aa4.99□□□□□ -1.61
TMEM260-208ENST00000555905 M0QZ58 72 aa4.98□□□□□ -1.61
TMEM260-208ENST00000555905 PSPHP1O15172 72 aa4.98□□□□□ -1.61
TMEM260-208ENST00000555905 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
TMEM260-208ENST00000555905 UQCR11O14957 56 aa4.91□□□□□ -1.62
TMEM260-208ENST00000555905 Q5VV11 94 aa4.91□□□□□ -1.62
TMEM260-208ENST00000555905 KRTAP13-4Q3LI77 160 aa4.9□□□□□ -1.63
TMEM260-208ENST00000555905 LINC01554Q52M75 96 aa4.9□□□□□ -1.63
TMEM260-208ENST00000555905 SPATA8Q6RVD6 105 aa4.9□□□□□ -1.63
TMEM260-208ENST00000555905 KRTAP19-8Q3LI54 63 aa4.85□□□□□ -1.63
TMEM260-208ENST00000555905 A0A0D9SG42 100 aa4.84□□□□□ -1.63
TMEM260-208ENST00000555905 A6NED7 52 aa4.84□□□□□ -1.63
TMEM260-208ENST00000555905 MIR22HGQ0VDD5 57 aa4.83□□□□□ -1.64
TMEM260-208ENST00000555905 A6NN06 94 aa4.8□□□□□ -1.64
TMEM260-208ENST00000555905 PLAC4Q8WY50 150 aa4.8□□□□□ -1.64
TMEM260-208ENST00000555905 A8MU10 97 aa4.79□□□□□ -1.64
TMEM260-208ENST00000555905 SVIPQ8NHG7 77 aa4.79□□□□□ -1.64
TMEM260-208ENST00000555905 MT1BP07438 61 aa4.78□□□□□ -1.64
TMEM260-208ENST00000555905 USH2AO75445 5202 aa4.77□□□□□ -1.65
TMEM260-208ENST00000555905 SPINT4Q6UDR6 99 aa4.74□□□□□ -1.65
TMEM260-208ENST00000555905 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
TMEM260-208ENST00000555905 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
TMEM260-208ENST00000555905 KRTAP12-2P59991 146 aa4.7□□□□□ -1.66
TMEM260-208ENST00000555905 K7ERS5 55 aa4.69□□□□□ -1.66
TMEM260-208ENST00000555905 CAMK2N1Q7Z7J9 78 aa4.68□□□□□ -1.66
TMEM260-208ENST00000555905 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
TMEM260-208ENST00000555905 FSIP2Q5CZC0 6907 aa4.66□□□□□ -1.66
TMEM260-208ENST00000555905 CRCT1Q9UGL9 99 aa4.65□□□□□ -1.67
TMEM260-208ENST00000555905 KRTAP19-6Q3LI70 58 aa4.64□□□□□ -1.67
TMEM260-208ENST00000555905 BRK1Q8WUW1 75 aa4.64□□□□□ -1.67
TMEM260-208ENST00000555905 PRO2289Q9P1D8 64 aa4.64□□□□□ -1.67
TMEM260-208ENST00000555905 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
TMEM260-208ENST00000555905 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
TMEM260-208ENST00000555905 MT1XP80297 61 aa4.59□□□□□ -1.67
TMEM260-208ENST00000555905 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
TMEM260-208ENST00000555905 C10orf95Q9H7T3 257 aa4.47□□□□□ -1.69
TMEM260-208ENST00000555905 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
TMEM260-208ENST00000555905 ROMO1P60602 79 aa4.43□□□□□ -1.7
TMEM260-208ENST00000555905 TNP1P09430 55 aa4.41□□□□□ -1.7
TMEM260-208ENST00000555905 KRTAP10-7P60409 375 aaPredicted RBP4.39□□□□□ -1.71
TMEM260-208ENST00000555905 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
TMEM260-208ENST00000555905 KRTAP10-12P60413 245 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms