RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 M0R2T5 61 aa5.5□□□□□ -1.53
SHMT2-218ENST00000555213 MT1HP80294 61 aa5.5□□□□□ -1.53
SHMT2-218ENST00000555213 SPANXA2-OT1Q8N9U9 137 aa5.49□□□□□ -1.53
SHMT2-218ENST00000555213 TMEM258P61165 79 aa5.47□□□□□ -1.53
SHMT2-218ENST00000555213 C4orf26Q17RF5 130 aa5.47□□□□□ -1.53
SHMT2-218ENST00000555213 DMAC1Q96GE9 116 aa5.41□□□□□ -1.54
SHMT2-218ENST00000555213 H1FX-AS1Q4G0G2 97 aa5.39□□□□□ -1.55
SHMT2-218ENST00000555213 ATP5EP56381 51 aaPredicted RBP5.38□□□□□ -1.55
SHMT2-218ENST00000555213 H3BS24 57 aa5.36□□□□□ -1.55
SHMT2-218ENST00000555213 KRTAP10-6P60371 365 aaPredicted RBP5.36□□□□□ -1.55
SHMT2-218ENST00000555213 ACYP2P14621 99 aa5.35□□□□□ -1.55
SHMT2-218ENST00000555213 FLGP20930 4061 aaPredicted RBP5.35□□□□□ -1.55
SHMT2-218ENST00000555213 A8MUN3 132 aa5.34□□□□□ -1.55
SHMT2-218ENST00000555213 RPS28P62857 69 aaKnown RBP5.32□□□□□ -1.56
SHMT2-218ENST00000555213 COA5Q86WW8 74 aa5.32□□□□□ -1.56
SHMT2-218ENST00000555213 SERP1Q9Y6X1 66 aa5.32□□□□□ -1.56
SHMT2-218ENST00000555213 S4R3F8 94 aa5.28□□□□□ -1.56
SHMT2-218ENST00000555213 KRTAP9-7A8MTY7 169 aa5.27□□□□□ -1.57
SHMT2-218ENST00000555213 LCA10Q71F78 164 aa5.25□□□□□ -1.57
SHMT2-218ENST00000555213 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.21□□□□□ -1.58
SHMT2-218ENST00000555213 CSAG1Q6PB30 78 aa5.21□□□□□ -1.58
SHMT2-218ENST00000555213 KRTAP9-8Q9BYQ0 159 aa5.21□□□□□ -1.58
SHMT2-218ENST00000555213 MT2AP02795 61 aa5.19□□□□□ -1.58
SHMT2-218ENST00000555213 CHKB-CPT1BH3BT56 60 aa5.18□□□□□ -1.58
SHMT2-218ENST00000555213 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
SHMT2-218ENST00000555213 SMIM26A0A096LP01 95 aa5.17□□□□□ -1.58
SHMT2-218ENST00000555213 MT1FP04733 61 aa5.15□□□□□ -1.59
SHMT2-218ENST00000555213 Q1T7F1 81 aa5.12□□□□□ -1.59
SHMT2-218ENST00000555213 LINC01558Q9Y6Z2 57 aa5.12□□□□□ -1.59
SHMT2-218ENST00000555213 SPTSSBQ8NFR3 76 aa5.1□□□□□ -1.59
SHMT2-218ENST00000555213 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
SHMT2-218ENST00000555213 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
SHMT2-218ENST00000555213 KRTAP9-3Q9BYQ3 159 aa5.05□□□□□ -1.6
SHMT2-218ENST00000555213 H0YAA0 97 aa5.04□□□□□ -1.6
SHMT2-218ENST00000555213 V9GYY9 64 aa5.03□□□□□ -1.6
SHMT2-218ENST00000555213 P0C880 135 aa5.01□□□□□ -1.61
SHMT2-218ENST00000555213 PSPHP1O15172 72 aa5□□□□□ -1.61
SHMT2-218ENST00000555213 Q5VV11 94 aa5□□□□□ -1.61
SHMT2-218ENST00000555213 A0A1B0GU69 56 aa4.99□□□□□ -1.61
SHMT2-218ENST00000555213 ADM2Q7Z4H4 148 aa4.99□□□□□ -1.61
SHMT2-218ENST00000555213 PRR15LQ9BU68 103 aa4.99□□□□□ -1.61
SHMT2-218ENST00000555213 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
SHMT2-218ENST00000555213 CRIPTQ9P021 101 aa4.98□□□□□ -1.61
SHMT2-218ENST00000555213 USH2AO75445 5202 aa4.96□□□□□ -1.61
SHMT2-218ENST00000555213 SEC61GP60059 68 aa4.93□□□□□ -1.62
SHMT2-218ENST00000555213 KRTAP13-4Q3LI77 160 aa4.91□□□□□ -1.62
SHMT2-218ENST00000555213 SPRR2GQ9BYE4 73 aa4.91□□□□□ -1.62
SHMT2-218ENST00000555213 FCGBPQ9Y6R7 5405 aaPredicted RBP4.9□□□□□ -1.62
SHMT2-218ENST00000555213 A0A1B0GU33 70 aa4.9□□□□□ -1.63
SHMT2-218ENST00000555213 KRTAP19-1Q8IUB9 90 aa4.9□□□□□ -1.63
SHMT2-218ENST00000555213 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
SHMT2-218ENST00000555213 R4GN34 69 aa4.87□□□□□ -1.63
SHMT2-218ENST00000555213 SPATA8Q6RVD6 105 aa4.85□□□□□ -1.63
SHMT2-218ENST00000555213 SYNE2Q8WXH0 6885 aaKnown RBP4.83□□□□□ -1.64
SHMT2-218ENST00000555213 MACF1Q9UPN3 7388 aaKnown RBP4.83□□□□□ -1.64
SHMT2-218ENST00000555213 M0QZ58 72 aa4.83□□□□□ -1.64
SHMT2-218ENST00000555213 UQCR11O14957 56 aa4.83□□□□□ -1.64
SHMT2-218ENST00000555213 KRTAP19-8Q3LI54 63 aa4.83□□□□□ -1.64
SHMT2-218ENST00000555213 A8MU10 97 aa4.82□□□□□ -1.64
SHMT2-218ENST00000555213 A6NED7 52 aa4.8□□□□□ -1.64
SHMT2-218ENST00000555213 MIR22HGQ0VDD5 57 aa4.78□□□□□ -1.64
SHMT2-218ENST00000555213 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.64
SHMT2-218ENST00000555213 MT1BP07438 61 aa4.77□□□□□ -1.65
SHMT2-218ENST00000555213 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
SHMT2-218ENST00000555213 LINC01554Q52M75 96 aa4.75□□□□□ -1.65
SHMT2-218ENST00000555213 CDC42SE1Q9NRR8 79 aa4.74□□□□□ -1.65
SHMT2-218ENST00000555213 PLAC4Q8WY50 150 aa4.73□□□□□ -1.65
SHMT2-218ENST00000555213 A0A0D9SG42 100 aa4.71□□□□□ -1.66
SHMT2-218ENST00000555213 A6NN06 94 aa4.7□□□□□ -1.66
SHMT2-218ENST00000555213 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
SHMT2-218ENST00000555213 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
SHMT2-218ENST00000555213 BRK1Q8WUW1 75 aa4.69□□□□□ -1.66
SHMT2-218ENST00000555213 KRTAP12-2P59991 146 aa4.67□□□□□ -1.66
SHMT2-218ENST00000555213 KRTAP4-12Q9BQ66 201 aa4.66□□□□□ -1.66
SHMT2-218ENST00000555213 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.67
SHMT2-218ENST00000555213 KRTAP10-5P60370 271 aa4.64□□□□□ -1.67
SHMT2-218ENST00000555213 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
SHMT2-218ENST00000555213 SPINT4Q6UDR6 99 aa4.6□□□□□ -1.67
SHMT2-218ENST00000555213 KRTAP20-1Q3LI63 56 aa4.57□□□□□ -1.68
SHMT2-218ENST00000555213 PRO0628Q9UI54 55 aa4.57□□□□□ -1.68
SHMT2-218ENST00000555213 NEBP20929 6669 aa4.57□□□□□ -1.68
SHMT2-218ENST00000555213 MT1XP80297 61 aa4.55□□□□□ -1.68
SHMT2-218ENST00000555213 CAMK2N1Q7Z7J9 78 aa4.54□□□□□ -1.68
SHMT2-218ENST00000555213 K7ERS5 55 aa4.48□□□□□ -1.69
SHMT2-218ENST00000555213 C10orf95Q9H7T3 257 aa4.48□□□□□ -1.69
SHMT2-218ENST00000555213 MUC12Q9UKN1 5478 aa4.48□□□□□ -1.69
SHMT2-218ENST00000555213 KRTAP23-1A1A580 65 aa4.46□□□□□ -1.7
SHMT2-218ENST00000555213 PMAIP1Q13794 54 aa4.45□□□□□ -1.7
SHMT2-218ENST00000555213 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.71
SHMT2-218ENST00000555213 KRTAP9-4Q9BYQ2 154 aa4.4□□□□□ -1.71
SHMT2-218ENST00000555213 ROMO1P60602 79 aa4.38□□□□□ -1.71
SHMT2-218ENST00000555213 KRTAP10-7P60409 375 aaPredicted RBP4.34□□□□□ -1.71
SHMT2-218ENST00000555213 LCE4AQ5TA78 99 aa4.34□□□□□ -1.71
SHMT2-218ENST00000555213 KRTAP10-12P60413 245 aa4.33□□□□□ -1.72
SHMT2-218ENST00000555213 KRTAP4-8A0A0G2JLE6 195 aa4.32□□□□□ -1.72
SHMT2-218ENST00000555213 KRTAP5-9P26371 169 aa4.32□□□□□ -1.72
SHMT2-218ENST00000555213 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
SHMT2-218ENST00000555213 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
SHMT2-218ENST00000555213 KRTAP2-3P0C7H8 128 aa4.31□□□□□ -1.72
SHMT2-218ENST00000555213 KRTAP2-4Q9BYR9 128 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms