RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 H3BPC8 53 aa4.19□□□□□ -1.74
ACTN1-213ENST00000554508 LCE2BO14633 110 aa4.19□□□□□ -1.74
ACTN1-213ENST00000554508 C4orf26Q17RF5 130 aa4.19□□□□□ -1.74
ACTN1-213ENST00000554508 C20orf197Q8N268 126 aa4.19□□□□□ -1.74
ACTN1-213ENST00000554508 LINC00208Q96KT6 92 aa4.18□□□□□ -1.74
ACTN1-213ENST00000554508 CYP4F30PQ9H0H9 118 aa4.18□□□□□ -1.74
ACTN1-213ENST00000554508 C1orf64Q8NEQ6 169 aa4.17□□□□□ -1.74
ACTN1-213ENST00000554508 SSPOA2VEC9 5147 aa4.17□□□□□ -1.74
ACTN1-213ENST00000554508 SNURFQ9Y675 71 aa4.16□□□□□ -1.74
ACTN1-213ENST00000554508 CCDC179H3BU77 68 aa4.15□□□□□ -1.75
ACTN1-213ENST00000554508 NDUFC1O43677 76 aa4.15□□□□□ -1.75
ACTN1-213ENST00000554508 KRTAP19-1Q8IUB9 90 aa4.13□□□□□ -1.75
ACTN1-213ENST00000554508 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.12□□□□□ -1.75
ACTN1-213ENST00000554508 KLKP1Q107X0 134 aa4.12□□□□□ -1.75
ACTN1-213ENST00000554508 FCGBPQ9Y6R7 5405 aaPredicted RBP4.09□□□□□ -1.75
ACTN1-213ENST00000554508 KRTAP9-7A8MTY7 169 aa4.09□□□□□ -1.75
ACTN1-213ENST00000554508 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.75
ACTN1-213ENST00000554508 KRTAP19-6Q3LI70 58 aa4.07□□□□□ -1.76
ACTN1-213ENST00000554508 ATP5EP56381 51 aaPredicted RBP4.06□□□□□ -1.76
ACTN1-213ENST00000554508 TMEM258P61165 79 aa4.06□□□□□ -1.76
ACTN1-213ENST00000554508 S4R3F8 94 aa4.06□□□□□ -1.76
ACTN1-213ENST00000554508 H7BZZ5 65 aa4.04□□□□□ -1.76
ACTN1-213ENST00000554508 CSAG1Q6PB30 78 aa4.04□□□□□ -1.76
ACTN1-213ENST00000554508 A8MUN3 132 aa4.03□□□□□ -1.76
ACTN1-213ENST00000554508 LCA10Q71F78 164 aa4.03□□□□□ -1.76
ACTN1-213ENST00000554508 SPANXA2-OT1Q8N9U9 137 aa4.02□□□□□ -1.77
ACTN1-213ENST00000554508 CYSTM1Q9H1C7 97 aa4.01□□□□□ -1.77
ACTN1-213ENST00000554508 MACF1Q9UPN3 7388 aaKnown RBP4□□□□□ -1.77
ACTN1-213ENST00000554508 ACYP2P14621 99 aa3.99□□□□□ -1.77
ACTN1-213ENST00000554508 CHKB-CPT1BH3BT56 60 aa3.98□□□□□ -1.77
ACTN1-213ENST00000554508 DMAC1Q96GE9 116 aa3.98□□□□□ -1.77
ACTN1-213ENST00000554508 KRTAP4-8Q9BYQ9 185 aa3.96□□□□□ -1.78
ACTN1-213ENST00000554508 SPRR2GQ9BYE4 73 aa3.94□□□□□ -1.78
ACTN1-213ENST00000554508 SPTSSBQ8NFR3 76 aa3.93□□□□□ -1.78
ACTN1-213ENST00000554508 SERP1Q9Y6X1 66 aa3.93□□□□□ -1.78
ACTN1-213ENST00000554508 KRTAP19-8Q3LI54 63 aa3.92□□□□□ -1.78
ACTN1-213ENST00000554508 Q5VV11 94 aa3.92□□□□□ -1.78
ACTN1-213ENST00000554508 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
ACTN1-213ENST00000554508 COA5Q86WW8 74 aa3.91□□□□□ -1.78
ACTN1-213ENST00000554508 CRIPTQ9P021 101 aa3.91□□□□□ -1.78
ACTN1-213ENST00000554508 MT1BP07438 61 aa3.9□□□□□ -1.79
ACTN1-213ENST00000554508 KRTAP6-3Q3LI67 103 aa3.89□□□□□ -1.79
ACTN1-213ENST00000554508 A6NN06 94 aa3.88□□□□□ -1.79
ACTN1-213ENST00000554508 H0YAA0 97 aa3.86□□□□□ -1.79
ACTN1-213ENST00000554508 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
ACTN1-213ENST00000554508 ADM2Q7Z4H4 148 aa3.85□□□□□ -1.79
ACTN1-213ENST00000554508 SMIM26A0A096LP01 95 aa3.83□□□□□ -1.8
ACTN1-213ENST00000554508 KRTAP10-5P60370 271 aa3.83□□□□□ -1.8
ACTN1-213ENST00000554508 SEC61GP60059 68 aa3.82□□□□□ -1.8
ACTN1-213ENST00000554508 V9GYY9 64 aa3.82□□□□□ -1.8
ACTN1-213ENST00000554508 PRR15LQ9BU68 103 aa3.8□□□□□ -1.8
ACTN1-213ENST00000554508 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
ACTN1-213ENST00000554508 A0A1B0GU69 56 aa3.76□□□□□ -1.81
ACTN1-213ENST00000554508 P0C880 135 aa3.76□□□□□ -1.81
ACTN1-213ENST00000554508 KRTAP4-8A0A0G2JLE6 195 aa3.75□□□□□ -1.81
ACTN1-213ENST00000554508 R4GN34 69 aa3.74□□□□□ -1.81
ACTN1-213ENST00000554508 Q1T7F1 81 aa3.73□□□□□ -1.81
ACTN1-213ENST00000554508 PLAC4Q8WY50 150 aa3.72□□□□□ -1.81
ACTN1-213ENST00000554508 LINC01558Q9Y6Z2 57 aa3.72□□□□□ -1.81
ACTN1-213ENST00000554508 M0QZ58 72 aa3.71□□□□□ -1.82
ACTN1-213ENST00000554508 PSPHP1O15172 72 aa3.71□□□□□ -1.82
ACTN1-213ENST00000554508 PRO2289Q9P1D8 64 aa3.71□□□□□ -1.82
ACTN1-213ENST00000554508 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
ACTN1-213ENST00000554508 KRTAP5-9P26371 169 aa3.7□□□□□ -1.82
ACTN1-213ENST00000554508 KRTAP9-9Q9BYP9 154 aa3.7□□□□□ -1.82
ACTN1-213ENST00000554508 KRTAP9-4Q9BYQ2 154 aa3.7□□□□□ -1.82
ACTN1-213ENST00000554508 NEBP20929 6669 aa3.7□□□□□ -1.82
ACTN1-213ENST00000554508 LINC01554Q52M75 96 aa3.67□□□□□ -1.82
ACTN1-213ENST00000554508 MT1XP80297 61 aa3.66□□□□□ -1.82
ACTN1-213ENST00000554508 KRTAP4-7Q9BYR0 210 aa3.65□□□□□ -1.83
ACTN1-213ENST00000554508 A6NED7 52 aa3.64□□□□□ -1.83
ACTN1-213ENST00000554508 A0A1B0GU33 70 aa3.63□□□□□ -1.83
ACTN1-213ENST00000554508 UQCR11O14957 56 aa3.62□□□□□ -1.83
ACTN1-213ENST00000554508 KMT2DO14686 5537 aa3.6□□□□□ -1.83
ACTN1-213ENST00000554508 KRTAP12-2P59991 146 aa3.6□□□□□ -1.83
ACTN1-213ENST00000554508 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.83
ACTN1-213ENST00000554508 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.83
ACTN1-213ENST00000554508 MIR22HGQ0VDD5 57 aa3.57□□□□□ -1.84
ACTN1-213ENST00000554508 SPATA8Q6RVD6 105 aa3.57□□□□□ -1.84
ACTN1-213ENST00000554508 SPRR2FQ96RM1 72 aa3.57□□□□□ -1.84
ACTN1-213ENST00000554508 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
ACTN1-213ENST00000554508 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
ACTN1-213ENST00000554508 KRTAP8-1Q8IUC2 63 aa3.56□□□□□ -1.84
ACTN1-213ENST00000554508 A0A0D9SG42 100 aa3.55□□□□□ -1.84
ACTN1-213ENST00000554508 BRK1Q8WUW1 75 aa3.55□□□□□ -1.84
ACTN1-213ENST00000554508 K7ERS5 55 aa3.53□□□□□ -1.84
ACTN1-213ENST00000554508 KRTAP2-3P0C7H8 128 aa3.52□□□□□ -1.85
ACTN1-213ENST00000554508 SPRR2EP22531 72 aa3.52□□□□□ -1.85
ACTN1-213ENST00000554508 SPRR2BP35325 72 aa3.52□□□□□ -1.85
ACTN1-213ENST00000554508 SPRR2AP35326 72 aa3.52□□□□□ -1.85
ACTN1-213ENST00000554508 KRTAP2-4Q9BYR9 128 aa3.52□□□□□ -1.85
ACTN1-213ENST00000554508 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
ACTN1-213ENST00000554508 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
ACTN1-213ENST00000554508 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
ACTN1-213ENST00000554508 KRTAP4-2Q9BYR5 136 aa3.5□□□□□ -1.85
ACTN1-213ENST00000554508 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
ACTN1-213ENST00000554508 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
ACTN1-213ENST00000554508 SPINT4Q6UDR6 99 aa3.48□□□□□ -1.85
ACTN1-213ENST00000554508 CAMK2N1Q7Z7J9 78 aa3.48□□□□□ -1.85
ACTN1-213ENST00000554508 A8MU10 97 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms