RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 DMAC1Q96GE9 116 aa8.46□□□□□ -1.06
ACTN1-209ENST00000553659 KRTAP10-6P60371 365 aaPredicted RBP8.45□□□□□ -1.06
ACTN1-209ENST00000553659 Q1T7F1 81 aa8.43□□□□□ -1.06
ACTN1-209ENST00000553659 A8MUN3 132 aa8.4□□□□□ -1.06
ACTN1-209ENST00000553659 M0R2T5 61 aa8.38□□□□□ -1.07
ACTN1-209ENST00000553659 ATP11AUNQ6ZP68 121 aa8.38□□□□□ -1.07
ACTN1-209ENST00000553659 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
ACTN1-209ENST00000553659 MPLKIPQ8TAP9 179 aa8.36□□□□□ -1.07
ACTN1-209ENST00000553659 CHKB-CPT1BH3BT56 60 aa8.35□□□□□ -1.07
ACTN1-209ENST00000553659 C4orf26Q17RF5 130 aa8.34□□□□□ -1.07
ACTN1-209ENST00000553659 COX6B2Q6YFQ2 88 aa8.34□□□□□ -1.07
ACTN1-209ENST00000553659 SPINK7P58062 85 aa8.31□□□□□ -1.08
ACTN1-209ENST00000553659 FLGP20930 4061 aaPredicted RBP8.25□□□□□ -1.09
ACTN1-209ENST00000553659 LINC01558Q9Y6Z2 57 aa8.25□□□□□ -1.09
ACTN1-209ENST00000553659 SPTSSBQ8NFR3 76 aa8.22□□□□□ -1.09
ACTN1-209ENST00000553659 PRR15LQ9BU68 103 aa8.18□□□□□ -1.1
ACTN1-209ENST00000553659 PSPHP1O15172 72 aa8.16□□□□□ -1.1
ACTN1-209ENST00000553659 Q5VV11 94 aa8.13□□□□□ -1.11
ACTN1-209ENST00000553659 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.1□□□□□ -1.11
ACTN1-209ENST00000553659 KRTAP9-7A8MTY7 169 aa8.09□□□□□ -1.11
ACTN1-209ENST00000553659 KRTAP9-8Q9BYQ0 159 aa8.07□□□□□ -1.12
ACTN1-209ENST00000553659 KRTAP3-1Q9BYR8 98 aa8.07□□□□□ -1.12
ACTN1-209ENST00000553659 A0A1B0GU69 56 aa8.06□□□□□ -1.12
ACTN1-209ENST00000553659 BRK1Q8WUW1 75 aa8.03□□□□□ -1.12
ACTN1-209ENST00000553659 SEC61GP60059 68 aa8.02□□□□□ -1.13
ACTN1-209ENST00000553659 PRO0628Q9UI54 55 aa8.02□□□□□ -1.13
ACTN1-209ENST00000553659 A6NED7 52 aa7.99□□□□□ -1.13
ACTN1-209ENST00000553659 RBM12B-AS1Q9P1G2 102 aa7.98□□□□□ -1.13
ACTN1-209ENST00000553659 SSPOA2VEC9 5147 aa7.94□□□□□ -1.14
ACTN1-209ENST00000553659 USH2AO75445 5202 aa7.94□□□□□ -1.14
ACTN1-209ENST00000553659 H1FX-AS1Q4G0G2 97 aa7.93□□□□□ -1.14
ACTN1-209ENST00000553659 S4R3F8 94 aa7.92□□□□□ -1.14
ACTN1-209ENST00000553659 CDC42SE1Q9NRR8 79 aa7.91□□□□□ -1.14
ACTN1-209ENST00000553659 MT2AP02795 61 aa7.9□□□□□ -1.14
ACTN1-209ENST00000553659 UQCR11O14957 56 aa7.88□□□□□ -1.15
ACTN1-209ENST00000553659 LCE2BO14633 110 aa7.86□□□□□ -1.15
ACTN1-209ENST00000553659 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
ACTN1-209ENST00000553659 SVIPQ8NHG7 77 aa7.85□□□□□ -1.15
ACTN1-209ENST00000553659 MT1FP04733 61 aa7.84□□□□□ -1.15
ACTN1-209ENST00000553659 LCA10Q71F78 164 aa7.83□□□□□ -1.16
ACTN1-209ENST00000553659 KRTAP9-3Q9BYQ3 159 aa7.82□□□□□ -1.16
ACTN1-209ENST00000553659 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
ACTN1-209ENST00000553659 KRTAP10-10P60014 251 aa7.8□□□□□ -1.16
ACTN1-209ENST00000553659 SPATA8Q6RVD6 105 aa7.79□□□□□ -1.16
ACTN1-209ENST00000553659 KRTAP3-3Q9BYR6 98 aa7.79□□□□□ -1.16
ACTN1-209ENST00000553659 MIR22HGQ0VDD5 57 aa7.77□□□□□ -1.17
ACTN1-209ENST00000553659 A0A1B0GU33 70 aa7.73□□□□□ -1.17
ACTN1-209ENST00000553659 CSAG1Q6PB30 78 aa7.73□□□□□ -1.17
ACTN1-209ENST00000553659 A8MU10 97 aa7.66□□□□□ -1.18
ACTN1-209ENST00000553659 H0YAA0 97 aa7.64□□□□□ -1.19
ACTN1-209ENST00000553659 KRTAP19-6Q3LI70 58 aa7.64□□□□□ -1.19
ACTN1-209ENST00000553659 PMAIP1Q13794 54 aa7.62□□□□□ -1.19
ACTN1-209ENST00000553659 MACF1Q9UPN3 7388 aaKnown RBP7.6□□□□□ -1.19
ACTN1-209ENST00000553659 KRTAP3-2Q9BYR7 98 aa7.58□□□□□ -1.2
ACTN1-209ENST00000553659 SYNE2Q8WXH0 6885 aaKnown RBP7.55□□□□□ -1.2
ACTN1-209ENST00000553659 ADM2Q7Z4H4 148 aa7.55□□□□□ -1.2
ACTN1-209ENST00000553659 A6NN06 94 aa7.53□□□□□ -1.2
ACTN1-209ENST00000553659 K7ERS5 55 aa7.5□□□□□ -1.21
ACTN1-209ENST00000553659 M0QZ58 72 aa7.47□□□□□ -1.21
ACTN1-209ENST00000553659 P0C880 135 aa7.47□□□□□ -1.21
ACTN1-209ENST00000553659 KRTAP6-3Q3LI67 103 aa7.47□□□□□ -1.21
ACTN1-209ENST00000553659 KTN1-AS1Q86SY8 53 aa7.41□□□□□ -1.22
ACTN1-209ENST00000553659 KRTAP13-4Q3LI77 160 aa7.37□□□□□ -1.23
ACTN1-209ENST00000553659 R4GN34 69 aa7.31□□□□□ -1.24
ACTN1-209ENST00000553659 A0A0D9SG42 100 aa7.29□□□□□ -1.24
ACTN1-209ENST00000553659 CRIPTQ9P021 101 aa7.26□□□□□ -1.25
ACTN1-209ENST00000553659 KRTAP12-1P59990 96 aa7.17□□□□□ -1.26
ACTN1-209ENST00000553659 SPINT4Q6UDR6 99 aa7.15□□□□□ -1.26
ACTN1-209ENST00000553659 KRTAP12-2P59991 146 aa7.13□□□□□ -1.27
ACTN1-209ENST00000553659 ROMO1P60602 79 aa7.13□□□□□ -1.27
ACTN1-209ENST00000553659 NEBP20929 6669 aa7.11□□□□□ -1.27
ACTN1-209ENST00000553659 MT1BP07438 61 aa7.11□□□□□ -1.27
ACTN1-209ENST00000553659 LINC01554Q52M75 96 aa7.1□□□□□ -1.27
ACTN1-209ENST00000553659 KRTAP19-8Q3LI54 63 aa7.06□□□□□ -1.28
ACTN1-209ENST00000553659 KRTAP20-1Q3LI63 56 aa7.06□□□□□ -1.28
ACTN1-209ENST00000553659 SPRR2GQ9BYE4 73 aa7.05□□□□□ -1.28
ACTN1-209ENST00000553659 MUC12Q9UKN1 5478 aa7.04□□□□□ -1.28
ACTN1-209ENST00000553659 KRTAP10-5P60370 271 aa7.03□□□□□ -1.28
ACTN1-209ENST00000553659 PRAC1Q96KF2 57 aa7.01□□□□□ -1.29
ACTN1-209ENST00000553659 KRTAP5-9P26371 169 aa7□□□□□ -1.29
ACTN1-209ENST00000553659 KRTAP25-1Q3LHN0 102 aa6.92□□□□□ -1.3
ACTN1-209ENST00000553659 CAMK2N1Q7Z7J9 78 aa6.88□□□□□ -1.31
ACTN1-209ENST00000553659 KMT2DO14686 5537 aa6.83□□□□□ -1.32
ACTN1-209ENST00000553659 PLAC4Q8WY50 150 aa6.82□□□□□ -1.32
ACTN1-209ENST00000553659 KRTAP2-3P0C7H8 128 aa6.81□□□□□ -1.32
ACTN1-209ENST00000553659 KRTAP2-4Q9BYR9 128 aa6.81□□□□□ -1.32
ACTN1-209ENST00000553659 MDN1Q9NU22 5596 aa6.75□□□□□ -1.33
ACTN1-209ENST00000553659 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
ACTN1-209ENST00000553659 SPRR2FQ96RM1 72 aa6.7□□□□□ -1.34
ACTN1-209ENST00000553659 SPRR2EP22531 72 aa6.68□□□□□ -1.34
ACTN1-209ENST00000553659 SPRR2BP35325 72 aa6.68□□□□□ -1.34
ACTN1-209ENST00000553659 SPRR2AP35326 72 aa6.68□□□□□ -1.34
ACTN1-209ENST00000553659 PRO2289Q9P1D8 64 aa6.63□□□□□ -1.35
ACTN1-209ENST00000553659 PP632Q6XCG6 107 aa6.62□□□□□ -1.35
ACTN1-209ENST00000553659 TNP1P09430 55 aa6.61□□□□□ -1.35
ACTN1-209ENST00000553659 MT1XP80297 61 aa6.59□□□□□ -1.35
ACTN1-209ENST00000553659 KRTAP2-2Q9BYT5 123 aa6.58□□□□□ -1.36
ACTN1-209ENST00000553659 KRTAP2-1Q9BYU5 128 aa6.58□□□□□ -1.36
ACTN1-209ENST00000553659 KRTAP8-1Q8IUC2 63 aa6.57□□□□□ -1.36
ACTN1-209ENST00000553659 KRTAP23-1A1A580 65 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms