RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 CSAG1Q6PB30 78 aa6.6□□□□□ -1.35
TUBB3-202ENST00000553656 CCDC179H3BU77 68 aa6.58□□□□□ -1.36
TUBB3-202ENST00000553656 MT1FP04733 61 aa6.57□□□□□ -1.36
TUBB3-202ENST00000553656 NDUFC1O43677 76 aa6.54□□□□□ -1.36
TUBB3-202ENST00000553656 C20orf197Q8N268 126 aa6.54□□□□□ -1.36
TUBB3-202ENST00000553656 SNURFQ9Y675 71 aa6.54□□□□□ -1.36
TUBB3-202ENST00000553656 DMAC1Q96GE9 116 aa6.53□□□□□ -1.36
TUBB3-202ENST00000553656 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
TUBB3-202ENST00000553656 ACYP2P14621 99 aa6.45□□□□□ -1.38
TUBB3-202ENST00000553656 CYSTM1Q9H1C7 97 aa6.45□□□□□ -1.38
TUBB3-202ENST00000553656 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
TUBB3-202ENST00000553656 SPANXA2-OT1Q8N9U9 137 aa6.42□□□□□ -1.38
TUBB3-202ENST00000553656 FSIP2Q5CZC0 6907 aa6.41□□□□□ -1.38
TUBB3-202ENST00000553656 CHKB-CPT1BH3BT56 60 aa6.38□□□□□ -1.39
TUBB3-202ENST00000553656 H7BZZ5 65 aa6.37□□□□□ -1.39
TUBB3-202ENST00000553656 KRTAP9-6A0A140TA67 174 aa6.36□□□□□ -1.39
TUBB3-202ENST00000553656 H0YAA0 97 aa6.36□□□□□ -1.39
TUBB3-202ENST00000553656 TMEM258P61165 79 aa6.36□□□□□ -1.39
TUBB3-202ENST00000553656 SPTSSBQ8NFR3 76 aa6.36□□□□□ -1.39
TUBB3-202ENST00000553656 CRCT1Q9UGL9 99 aa6.36□□□□□ -1.39
TUBB3-202ENST00000553656 LCE2BO14633 110 aa6.34□□□□□ -1.39
TUBB3-202ENST00000553656 ADM2Q7Z4H4 148 aa6.32□□□□□ -1.4
TUBB3-202ENST00000553656 CRIPTQ9P021 101 aa6.3□□□□□ -1.4
TUBB3-202ENST00000553656 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
TUBB3-202ENST00000553656 USH2AO75445 5202 aa6.26□□□□□ -1.41
TUBB3-202ENST00000553656 KRTAP19-1Q8IUB9 90 aa6.24□□□□□ -1.41
TUBB3-202ENST00000553656 SPRR2GQ9BYE4 73 aa6.24□□□□□ -1.41
TUBB3-202ENST00000553656 COA5Q86WW8 74 aa6.23□□□□□ -1.41
TUBB3-202ENST00000553656 Q5VV11 94 aa6.18□□□□□ -1.42
TUBB3-202ENST00000553656 P0C880 135 aa6.17□□□□□ -1.42
TUBB3-202ENST00000553656 SERP1Q9Y6X1 66 aa6.16□□□□□ -1.42
TUBB3-202ENST00000553656 R4GN34 69 aa6.16□□□□□ -1.42
TUBB3-202ENST00000553656 KRTAP3-2Q9BYR7 98 aa6.15□□□□□ -1.42
TUBB3-202ENST00000553656 KRTAP19-8Q3LI54 63 aa6.14□□□□□ -1.43
TUBB3-202ENST00000553656 SSPOA2VEC9 5147 aa6.13□□□□□ -1.43
TUBB3-202ENST00000553656 M0QZ58 72 aa6.11□□□□□ -1.43
TUBB3-202ENST00000553656 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
TUBB3-202ENST00000553656 MT1BP07438 61 aa6.09□□□□□ -1.43
TUBB3-202ENST00000553656 KRTAP19-6Q3LI70 58 aa6.09□□□□□ -1.43
TUBB3-202ENST00000553656 SEC61GP60059 68 aa6.08□□□□□ -1.44
TUBB3-202ENST00000553656 LINC01554Q52M75 96 aa6.02□□□□□ -1.45
TUBB3-202ENST00000553656 PLAC4Q8WY50 150 aa6□□□□□ -1.45
TUBB3-202ENST00000553656 SMIM26A0A096LP01 95 aa5.99□□□□□ -1.45
TUBB3-202ENST00000553656 A6NN06 94 aa5.98□□□□□ -1.45
TUBB3-202ENST00000553656 FCGBPQ9Y6R7 5405 aaPredicted RBP5.96□□□□□ -1.45
TUBB3-202ENST00000553656 A0A1B0GU69 56 aa5.94□□□□□ -1.46
TUBB3-202ENST00000553656 KRTAP10-5P60370 271 aa5.92□□□□□ -1.46
TUBB3-202ENST00000553656 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.46
TUBB3-202ENST00000553656 A0A1B0GU33 70 aa5.89□□□□□ -1.47
TUBB3-202ENST00000553656 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
TUBB3-202ENST00000553656 Q1T7F1 81 aa5.87□□□□□ -1.47
TUBB3-202ENST00000553656 PRR15LQ9BU68 103 aa5.87□□□□□ -1.47
TUBB3-202ENST00000553656 V9GYY9 64 aa5.87□□□□□ -1.47
TUBB3-202ENST00000553656 MACF1Q9UPN3 7388 aaKnown RBP5.86□□□□□ -1.47
TUBB3-202ENST00000553656 KRTAP13-4Q3LI77 160 aa5.86□□□□□ -1.47
TUBB3-202ENST00000553656 LINC01558Q9Y6Z2 57 aa5.83□□□□□ -1.48
TUBB3-202ENST00000553656 SPATA8Q6RVD6 105 aa5.81□□□□□ -1.48
TUBB3-202ENST00000553656 A0A0D9SG42 100 aa5.79□□□□□ -1.48
TUBB3-202ENST00000553656 MT1XP80297 61 aa5.79□□□□□ -1.48
TUBB3-202ENST00000553656 PSPHP1O15172 72 aa5.76□□□□□ -1.49
TUBB3-202ENST00000553656 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
TUBB3-202ENST00000553656 SYNE2Q8WXH0 6885 aaKnown RBP5.74□□□□□ -1.49
TUBB3-202ENST00000553656 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
TUBB3-202ENST00000553656 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
TUBB3-202ENST00000553656 A8MU10 97 aa5.65□□□□□ -1.5
TUBB3-202ENST00000553656 UQCR11O14957 56 aa5.65□□□□□ -1.5
TUBB3-202ENST00000553656 KRTAP12-1P59990 96 aa5.64□□□□□ -1.51
TUBB3-202ENST00000553656 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
TUBB3-202ENST00000553656 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
TUBB3-202ENST00000553656 A6NED7 52 aa5.6□□□□□ -1.51
TUBB3-202ENST00000553656 MIR22HGQ0VDD5 57 aa5.55□□□□□ -1.52
TUBB3-202ENST00000553656 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
TUBB3-202ENST00000553656 BRK1Q8WUW1 75 aa5.53□□□□□ -1.52
TUBB3-202ENST00000553656 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
TUBB3-202ENST00000553656 KRTAP8-1Q8IUC2 63 aa5.5□□□□□ -1.53
TUBB3-202ENST00000553656 CDC42SE1Q9NRR8 79 aa5.5□□□□□ -1.53
TUBB3-202ENST00000553656 K7ERS5 55 aa5.45□□□□□ -1.54
TUBB3-202ENST00000553656 KRTAP5-9P26371 169 aa5.45□□□□□ -1.54
TUBB3-202ENST00000553656 KMT2DO14686 5537 aa5.43□□□□□ -1.54
TUBB3-202ENST00000553656 KRTAP4-8A0A0G2JLE6 195 aa5.43□□□□□ -1.54
TUBB3-202ENST00000553656 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
TUBB3-202ENST00000553656 SPRR2FQ96RM1 72 aa5.41□□□□□ -1.54
TUBB3-202ENST00000553656 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
TUBB3-202ENST00000553656 NEBP20929 6669 aa5.37□□□□□ -1.55
TUBB3-202ENST00000553656 TNP1P09430 55 aa5.35□□□□□ -1.55
TUBB3-202ENST00000553656 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
TUBB3-202ENST00000553656 MUC12Q9UKN1 5478 aa5.31□□□□□ -1.56
TUBB3-202ENST00000553656 SPRR2EP22531 72 aa5.27□□□□□ -1.57
TUBB3-202ENST00000553656 SPRR2BP35325 72 aa5.27□□□□□ -1.57
TUBB3-202ENST00000553656 SPRR2AP35326 72 aa5.27□□□□□ -1.57
TUBB3-202ENST00000553656 PMAIP1Q13794 54 aa5.2□□□□□ -1.58
TUBB3-202ENST00000553656 MDN1Q9NU22 5596 aa5.19□□□□□ -1.58
TUBB3-202ENST00000553656 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
TUBB3-202ENST00000553656 KRTAP25-1Q3LHN0 102 aa5.18□□□□□ -1.58
TUBB3-202ENST00000553656 LCE3AQ5TA76 89 aa5.17□□□□□ -1.58
TUBB3-202ENST00000553656 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
TUBB3-202ENST00000553656 KRTAP19-5Q3LI72 72 aa5.13□□□□□ -1.59
TUBB3-202ENST00000553656 MT1EP04732 61 aa5.12□□□□□ -1.59
TUBB3-202ENST00000553656 SPRR2DP22532 72 aa5.09□□□□□ -1.59
TUBB3-202ENST00000553656 KRTAP20-1Q3LI63 56 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms