RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 CSAG1Q6PB30 78 aa9.29□□□□□ -0.92
PSEN1-207ENST00000553599 CCDC179H3BU77 68 aa9.25□□□□□ -0.93
PSEN1-207ENST00000553599 H7BZZ5 65 aa9.25□□□□□ -0.93
PSEN1-207ENST00000553599 KRTAP3-3Q9BYR6 98 aa9.24□□□□□ -0.93
PSEN1-207ENST00000553599 CYSTM1Q9H1C7 97 aa9.22□□□□□ -0.93
PSEN1-207ENST00000553599 KRTAP9-8Q9BYQ0 159 aa9.21□□□□□ -0.94
PSEN1-207ENST00000553599 MT2AP02795 61 aa9.13□□□□□ -0.95
PSEN1-207ENST00000553599 CHKB-CPT1BH3BT56 60 aa9.1□□□□□ -0.95
PSEN1-207ENST00000553599 SPTSSBQ8NFR3 76 aa9.1□□□□□ -0.95
PSEN1-207ENST00000553599 ATP5EP56381 51 aaPredicted RBP9.06□□□□□ -0.96
PSEN1-207ENST00000553599 KRTAP10-10P60014 251 aa9.06□□□□□ -0.96
PSEN1-207ENST00000553599 MT1FP04733 61 aa9.05□□□□□ -0.96
PSEN1-207ENST00000553599 H0YAA0 97 aa9.04□□□□□ -0.96
PSEN1-207ENST00000553599 KRTAP9-2Q9BYQ4 174 aa9.04□□□□□ -0.96
PSEN1-207ENST00000553599 COA5Q86WW8 74 aa9.02□□□□□ -0.97
PSEN1-207ENST00000553599 TMEM258P61165 79 aa9.01□□□□□ -0.97
PSEN1-207ENST00000553599 LCE2DQ5TA82 110 aaPredicted RBP9□□□□□ -0.97
PSEN1-207ENST00000553599 PCP4P48539 62 aa8.92□□□□□ -0.98
PSEN1-207ENST00000553599 KRTAP9-3Q9BYQ3 159 aa8.91□□□□□ -0.98
PSEN1-207ENST00000553599 ADM2Q7Z4H4 148 aa8.89□□□□□ -0.99
PSEN1-207ENST00000553599 CRIPTQ9P021 101 aa8.87□□□□□ -0.99
PSEN1-207ENST00000553599 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
PSEN1-207ENST00000553599 P0C880 135 aa8.75□□□□□ -1.01
PSEN1-207ENST00000553599 SPRR2GQ9BYE4 73 aa8.74□□□□□ -1.01
PSEN1-207ENST00000553599 KRTAP19-1Q8IUB9 90 aa8.72□□□□□ -1.01
PSEN1-207ENST00000553599 SERP1Q9Y6X1 66 aa8.72□□□□□ -1.01
PSEN1-207ENST00000553599 LCE2BO14633 110 aa8.71□□□□□ -1.02
PSEN1-207ENST00000553599 KRTAP9-6A0A140TA67 174 aa8.7□□□□□ -1.02
PSEN1-207ENST00000553599 SEC61GP60059 68 aa8.7□□□□□ -1.02
PSEN1-207ENST00000553599 R4GN34 69 aa8.66□□□□□ -1.02
PSEN1-207ENST00000553599 FSIP2Q5CZC0 6907 aa8.62□□□□□ -1.03
PSEN1-207ENST00000553599 M0QZ58 72 aa8.59□□□□□ -1.03
PSEN1-207ENST00000553599 KRTAP19-8Q3LI54 63 aa8.59□□□□□ -1.03
PSEN1-207ENST00000553599 CRCT1Q9UGL9 99 aa8.59□□□□□ -1.03
PSEN1-207ENST00000553599 A0A1B0GU69 56 aa8.57□□□□□ -1.04
PSEN1-207ENST00000553599 USH2AO75445 5202 aa8.57□□□□□ -1.04
PSEN1-207ENST00000553599 Q5VV11 94 aa8.54□□□□□ -1.04
PSEN1-207ENST00000553599 LINC01558Q9Y6Z2 57 aa8.54□□□□□ -1.04
PSEN1-207ENST00000553599 PRR15LQ9BU68 103 aa8.53□□□□□ -1.04
PSEN1-207ENST00000553599 RPS28P62857 69 aaKnown RBP8.49□□□□□ -1.05
PSEN1-207ENST00000553599 A0A1B0GU33 70 aa8.47□□□□□ -1.05
PSEN1-207ENST00000553599 MT1BP07438 61 aa8.46□□□□□ -1.06
PSEN1-207ENST00000553599 V9GYY9 64 aa8.45□□□□□ -1.06
PSEN1-207ENST00000553599 SMIM26A0A096LP01 95 aa8.42□□□□□ -1.06
PSEN1-207ENST00000553599 LINC01554Q52M75 96 aa8.4□□□□□ -1.06
PSEN1-207ENST00000553599 Q1T7F1 81 aa8.39□□□□□ -1.07
PSEN1-207ENST00000553599 SSPOA2VEC9 5147 aa8.39□□□□□ -1.07
PSEN1-207ENST00000553599 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
PSEN1-207ENST00000553599 KRTAP19-6Q3LI70 58 aa8.37□□□□□ -1.07
PSEN1-207ENST00000553599 A6NN06 94 aa8.36□□□□□ -1.07
PSEN1-207ENST00000553599 PLAC4Q8WY50 150 aa8.36□□□□□ -1.07
PSEN1-207ENST00000553599 SPATA8Q6RVD6 105 aa8.29□□□□□ -1.08
PSEN1-207ENST00000553599 UQCR11O14957 56 aa8.24□□□□□ -1.09
PSEN1-207ENST00000553599 A0A0D9SG42 100 aa8.2□□□□□ -1.1
PSEN1-207ENST00000553599 PSPHP1O15172 72 aa8.2□□□□□ -1.1
PSEN1-207ENST00000553599 KRTAP10-5P60370 271 aa8.18□□□□□ -1.1
PSEN1-207ENST00000553599 PRO2289Q9P1D8 64 aa8.16□□□□□ -1.1
PSEN1-207ENST00000553599 FCGBPQ9Y6R7 5405 aaPredicted RBP8.12□□□□□ -1.11
PSEN1-207ENST00000553599 A8MU10 97 aa8.09□□□□□ -1.11
PSEN1-207ENST00000553599 MT1XP80297 61 aa8.08□□□□□ -1.12
PSEN1-207ENST00000553599 KRTAP12-1P59990 96 aa8.07□□□□□ -1.12
PSEN1-207ENST00000553599 MIR22HGQ0VDD5 57 aa8.07□□□□□ -1.12
PSEN1-207ENST00000553599 SPINT4Q6UDR6 99 aa8.07□□□□□ -1.12
PSEN1-207ENST00000553599 CAMK2N1Q7Z7J9 78 aa8.04□□□□□ -1.12
PSEN1-207ENST00000553599 KRTAP12-2P59991 146 aa8.01□□□□□ -1.13
PSEN1-207ENST00000553599 A6NED7 52 aa8□□□□□ -1.13
PSEN1-207ENST00000553599 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.96□□□□□ -1.14
PSEN1-207ENST00000553599 K7ERS5 55 aa7.87□□□□□ -1.15
PSEN1-207ENST00000553599 KRTAP9-7A8MTY7 169 aa7.84□□□□□ -1.15
PSEN1-207ENST00000553599 CDC42SE1Q9NRR8 79 aa7.8□□□□□ -1.16
PSEN1-207ENST00000553599 MACF1Q9UPN3 7388 aaKnown RBP7.79□□□□□ -1.16
PSEN1-207ENST00000553599 KRTAP10-12P60413 245 aa7.71□□□□□ -1.18
PSEN1-207ENST00000553599 KRTAP10-7P60409 375 aaPredicted RBP7.7□□□□□ -1.18
PSEN1-207ENST00000553599 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
PSEN1-207ENST00000553599 SYNE2Q8WXH0 6885 aaKnown RBP7.66□□□□□ -1.18
PSEN1-207ENST00000553599 TNP1P09430 55 aa7.58□□□□□ -1.2
PSEN1-207ENST00000553599 KRTAP6-3Q3LI67 103 aa7.58□□□□□ -1.2
PSEN1-207ENST00000553599 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.21
PSEN1-207ENST00000553599 KRTAP4-8A0A0G2JLE6 195 aa7.51□□□□□ -1.21
PSEN1-207ENST00000553599 KRTAP4-8Q9BYQ9 185 aa7.51□□□□□ -1.21
PSEN1-207ENST00000553599 BRK1Q8WUW1 75 aa7.5□□□□□ -1.21
PSEN1-207ENST00000553599 KMT2DO14686 5537 aa7.47□□□□□ -1.21
PSEN1-207ENST00000553599 KRTAP5-9P26371 169 aa7.47□□□□□ -1.21
PSEN1-207ENST00000553599 KRTAP25-1Q3LHN0 102 aa7.46□□□□□ -1.22
PSEN1-207ENST00000553599 ROMO1P60602 79 aa7.4□□□□□ -1.22
PSEN1-207ENST00000553599 SPRR2FQ96RM1 72 aa7.35□□□□□ -1.23
PSEN1-207ENST00000553599 LCE3AQ5TA76 89 aa7.29□□□□□ -1.24
PSEN1-207ENST00000553599 KRTAP23-1A1A580 65 aa7.25□□□□□ -1.25
PSEN1-207ENST00000553599 MUC12Q9UKN1 5478 aa7.22□□□□□ -1.25
PSEN1-207ENST00000553599 KRTAP19-7Q3SYF9 63 aa7.21□□□□□ -1.26
PSEN1-207ENST00000553599 NEBP20929 6669 aa7.19□□□□□ -1.26
PSEN1-207ENST00000553599 KRTAP19-5Q3LI72 72 aa7.17□□□□□ -1.26
PSEN1-207ENST00000553599 MT1EP04732 61 aa7.13□□□□□ -1.27
PSEN1-207ENST00000553599 PMAIP1Q13794 54 aa7.11□□□□□ -1.27
PSEN1-207ENST00000553599 PP632Q6XCG6 107 aa7.11□□□□□ -1.27
PSEN1-207ENST00000553599 PRO0628Q9UI54 55 aa7.11□□□□□ -1.27
PSEN1-207ENST00000553599 SPRR2EP22531 72 aa7.1□□□□□ -1.27
PSEN1-207ENST00000553599 SPRR2BP35325 72 aa7.1□□□□□ -1.27
PSEN1-207ENST00000553599 SPRR2AP35326 72 aa7.1□□□□□ -1.27
PSEN1-207ENST00000553599 LCE1AQ5T7P2 110 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 1112.1 ms