RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 XP32Q5T750 250 aa8.1□□□□□ -1.11
ABCD4-218ENST00000553486 A6NED7 52 aa8.02□□□□□ -1.13
ABCD4-218ENST00000553486 SPTSSBQ8NFR3 76 aa8.02□□□□□ -1.13
ABCD4-218ENST00000553486 COX6B2Q6YFQ2 88 aa8.01□□□□□ -1.13
ABCD4-218ENST00000553486 KRTAP3-1Q9BYR8 98 aa8.01□□□□□ -1.13
ABCD4-218ENST00000553486 A0A1B0GU69 56 aa8□□□□□ -1.13
ABCD4-218ENST00000553486 TPRXLQ17RH7 258 aa7.99□□□□□ -1.13
ABCD4-218ENST00000553486 FAT4Q6V0I7 4981 aa7.98□□□□□ -1.13
ABCD4-218ENST00000553486 LCE2AQ5TA79 106 aaPredicted RBP7.93□□□□□ -1.14
ABCD4-218ENST00000553486 CDC42SE1Q9NRR8 79 aa7.92□□□□□ -1.14
ABCD4-218ENST00000553486 KRTAP9-2Q9BYQ4 174 aa7.92□□□□□ -1.14
ABCD4-218ENST00000553486 LCA10Q71F78 164 aa7.91□□□□□ -1.14
ABCD4-218ENST00000553486 SEC61GP60059 68 aa7.89□□□□□ -1.15
ABCD4-218ENST00000553486 A8MU10 97 aa7.87□□□□□ -1.15
ABCD4-218ENST00000553486 MUC17Q685J3 4493 aa7.87□□□□□ -1.15
ABCD4-218ENST00000553486 UQCR11O14957 56 aa7.82□□□□□ -1.16
ABCD4-218ENST00000553486 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
ABCD4-218ENST00000553486 MIR22HGQ0VDD5 57 aa7.75□□□□□ -1.17
ABCD4-218ENST00000553486 S4R3F8 94 aa7.75□□□□□ -1.17
ABCD4-218ENST00000553486 PMAIP1Q13794 54 aa7.73□□□□□ -1.17
ABCD4-218ENST00000553486 H1FX-AS1Q4G0G2 97 aa7.73□□□□□ -1.17
ABCD4-218ENST00000553486 RBM12B-AS1Q9P1G2 102 aa7.73□□□□□ -1.17
ABCD4-218ENST00000553486 SEC61BP60468 96 aaKnown RBP7.72□□□□□ -1.17
ABCD4-218ENST00000553486 KRTAP3-3Q9BYR6 98 aa7.71□□□□□ -1.18
ABCD4-218ENST00000553486 KRTAP9-6A0A140TA67 174 aa7.7□□□□□ -1.18
ABCD4-218ENST00000553486 KRTAP4-1Q9BYQ7 146 aa7.68□□□□□ -1.18
ABCD4-218ENST00000553486 A0A1B0GU33 70 aa7.66□□□□□ -1.18
ABCD4-218ENST00000553486 A6NN06 94 aa7.62□□□□□ -1.19
ABCD4-218ENST00000553486 H0YAA0 97 aa7.57□□□□□ -1.2
ABCD4-218ENST00000553486 FSIP2Q5CZC0 6907 aa7.55□□□□□ -1.2
ABCD4-218ENST00000553486 LCE2DQ5TA82 110 aaPredicted RBP7.55□□□□□ -1.2
ABCD4-218ENST00000553486 CSAG1Q6PB30 78 aa7.54□□□□□ -1.2
ABCD4-218ENST00000553486 KRTAP10-6P60371 365 aaPredicted RBP7.53□□□□□ -1.2
ABCD4-218ENST00000553486 LCE2CQ5TA81 110 aa7.53□□□□□ -1.2
ABCD4-218ENST00000553486 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
ABCD4-218ENST00000553486 KRTAP19-2Q3LHN2 52 aa7.5□□□□□ -1.21
ABCD4-218ENST00000553486 KTN1-AS1Q86SY8 53 aa7.49□□□□□ -1.21
ABCD4-218ENST00000553486 MT1HP80294 61 aa7.45□□□□□ -1.22
ABCD4-218ENST00000553486 ADM2Q7Z4H4 148 aa7.44□□□□□ -1.22
ABCD4-218ENST00000553486 CRCT1Q9UGL9 99 aa7.44□□□□□ -1.22
ABCD4-218ENST00000553486 P0C880 135 aa7.43□□□□□ -1.22
ABCD4-218ENST00000553486 K7ERS5 55 aa7.37□□□□□ -1.23
ABCD4-218ENST00000553486 KRTAP13-4Q3LI77 160 aa7.36□□□□□ -1.23
ABCD4-218ENST00000553486 LORP23490 312 aaPredicted RBP7.34□□□□□ -1.23
ABCD4-218ENST00000553486 FLGP20930 4061 aaPredicted RBP7.3□□□□□ -1.24
ABCD4-218ENST00000553486 A0A0D9SG42 100 aa7.29□□□□□ -1.24
ABCD4-218ENST00000553486 M0QZ58 72 aa7.29□□□□□ -1.24
ABCD4-218ENST00000553486 M0R2T5 61 aa7.29□□□□□ -1.24
ABCD4-218ENST00000553486 PRAC1Q96KF2 57 aa7.19□□□□□ -1.26
ABCD4-218ENST00000553486 R4GN34 69 aa7.15□□□□□ -1.26
ABCD4-218ENST00000553486 KRTAP12-1P59990 96 aa7.11□□□□□ -1.27
ABCD4-218ENST00000553486 KRTAP12-2P59991 146 aa7.11□□□□□ -1.27
ABCD4-218ENST00000553486 SPINT4Q6UDR6 99 aa7.11□□□□□ -1.27
ABCD4-218ENST00000553486 ROMO1P60602 79 aa7.09□□□□□ -1.27
ABCD4-218ENST00000553486 LINC01554Q52M75 96 aa7.04□□□□□ -1.28
ABCD4-218ENST00000553486 KRTAP9-8Q9BYQ0 159 aa7.01□□□□□ -1.29
ABCD4-218ENST00000553486 USH2AO75445 5202 aa6.99□□□□□ -1.29
ABCD4-218ENST00000553486 SSPOA2VEC9 5147 aa6.97□□□□□ -1.29
ABCD4-218ENST00000553486 CRIPTQ9P021 101 aa6.97□□□□□ -1.29
ABCD4-218ENST00000553486 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.3
ABCD4-218ENST00000553486 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.94□□□□□ -1.3
ABCD4-218ENST00000553486 KRTAP9-7A8MTY7 169 aa6.91□□□□□ -1.3
ABCD4-218ENST00000553486 MT2AP02795 61 aa6.89□□□□□ -1.31
ABCD4-218ENST00000553486 FCGBPQ9Y6R7 5405 aaPredicted RBP6.86□□□□□ -1.31
ABCD4-218ENST00000553486 MT1FP04733 61 aa6.84□□□□□ -1.31
ABCD4-218ENST00000553486 LCE2BO14633 110 aa6.81□□□□□ -1.32
ABCD4-218ENST00000553486 KRTAP10-10P60014 251 aa6.8□□□□□ -1.32
ABCD4-218ENST00000553486 KRTAP9-3Q9BYQ3 159 aa6.8□□□□□ -1.32
ABCD4-218ENST00000553486 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
ABCD4-218ENST00000553486 CAMK2N1Q7Z7J9 78 aa6.75□□□□□ -1.33
ABCD4-218ENST00000553486 SPRR2GQ9BYE4 73 aa6.72□□□□□ -1.33
ABCD4-218ENST00000553486 C10orf95Q9H7T3 257 aa6.72□□□□□ -1.33
ABCD4-218ENST00000553486 MACF1Q9UPN3 7388 aaKnown RBP6.68□□□□□ -1.34
ABCD4-218ENST00000553486 SYNE2Q8WXH0 6885 aaKnown RBP6.63□□□□□ -1.35
ABCD4-218ENST00000553486 PLAC4Q8WY50 150 aa6.62□□□□□ -1.35
ABCD4-218ENST00000553486 KRTAP19-6Q3LI70 58 aa6.61□□□□□ -1.35
ABCD4-218ENST00000553486 KRTAP19-8Q3LI54 63 aa6.49□□□□□ -1.37
ABCD4-218ENST00000553486 TNP1P09430 55 aa6.48□□□□□ -1.37
ABCD4-218ENST00000553486 PP632Q6XCG6 107 aa6.46□□□□□ -1.37
ABCD4-218ENST00000553486 KRTAP6-3Q3LI67 103 aa6.41□□□□□ -1.38
ABCD4-218ENST00000553486 MT1BP07438 61 aa6.37□□□□□ -1.39
ABCD4-218ENST00000553486 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
ABCD4-218ENST00000553486 KRTAP10-5P60370 271 aa6.24□□□□□ -1.41
ABCD4-218ENST00000553486 MT1XP80297 61 aa6.24□□□□□ -1.41
ABCD4-218ENST00000553486 KRTAP15-1Q3LI76 137 aa6.23□□□□□ -1.41
ABCD4-218ENST00000553486 MUC12Q9UKN1 5478 aa6.22□□□□□ -1.41
ABCD4-218ENST00000553486 NEBP20929 6669 aa6.21□□□□□ -1.42
ABCD4-218ENST00000553486 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
ABCD4-218ENST00000553486 LCE3AQ5TA76 89 aa6.12□□□□□ -1.43
ABCD4-218ENST00000553486 KMT2DO14686 5537 aa6.06□□□□□ -1.44
ABCD4-218ENST00000553486 MDN1Q9NU22 5596 aa6.06□□□□□ -1.44
ABCD4-218ENST00000553486 KRTAP5-9P26371 169 aa6.05□□□□□ -1.44
ABCD4-218ENST00000553486 KRTAP10-12P60413 245 aa6.04□□□□□ -1.44
ABCD4-218ENST00000553486 KRTAP20-1Q3LI63 56 aa6.03□□□□□ -1.44
ABCD4-218ENST00000553486 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
ABCD4-218ENST00000553486 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
ABCD4-218ENST00000553486 NDUFAF8A1L188 74 aa5.9□□□□□ -1.47
ABCD4-218ENST00000553486 KRTAP12-3P60328 96 aa5.87□□□□□ -1.47
ABCD4-218ENST00000553486 LUZP6Q538Z0 58 aa5.83□□□□□ -1.48
ABCD4-218ENST00000553486 SPRR5A0A1B0GTR4 108 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms