RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 HERC2O95714 4834 aa4.89□□□□□ -1.63
MTHFD1-203ENST00000553391 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
MTHFD1-203ENST00000553391 TPRXLQ17RH7 258 aa4.89□□□□□ -1.63
MTHFD1-203ENST00000553391 COX6B2Q6YFQ2 88 aa4.89□□□□□ -1.63
MTHFD1-203ENST00000553391 PRR15LQ9BU68 103 aa4.87□□□□□ -1.63
MTHFD1-203ENST00000553391 ABCA13Q86UQ4 5058 aa4.83□□□□□ -1.64
MTHFD1-203ENST00000553391 SPTSSBQ8NFR3 76 aa4.8□□□□□ -1.64
MTHFD1-203ENST00000553391 PRO0628Q9UI54 55 aa4.79□□□□□ -1.64
MTHFD1-203ENST00000553391 LCE3BQ5TA77 95 aa4.78□□□□□ -1.64
MTHFD1-203ENST00000553391 BRK1Q8WUW1 75 aa4.78□□□□□ -1.64
MTHFD1-203ENST00000553391 A0A1B0GU69 56 aa4.77□□□□□ -1.65
MTHFD1-203ENST00000553391 LRP2P98164 4655 aa4.76□□□□□ -1.65
MTHFD1-203ENST00000553391 LCA10Q71F78 164 aa4.76□□□□□ -1.65
MTHFD1-203ENST00000553391 SVIPQ8NHG7 77 aa4.75□□□□□ -1.65
MTHFD1-203ENST00000553391 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
MTHFD1-203ENST00000553391 MUC17Q685J3 4493 aa4.74□□□□□ -1.65
MTHFD1-203ENST00000553391 LPAP08519 4548 aa4.73□□□□□ -1.65
MTHFD1-203ENST00000553391 A6NED7 52 aa4.73□□□□□ -1.65
MTHFD1-203ENST00000553391 SEC61BP60468 96 aaKnown RBP4.73□□□□□ -1.65
MTHFD1-203ENST00000553391 H1FX-AS1Q4G0G2 97 aa4.72□□□□□ -1.65
MTHFD1-203ENST00000553391 A8MU10 97 aa4.71□□□□□ -1.66
MTHFD1-203ENST00000553391 CDC42SE1Q9NRR8 79 aa4.71□□□□□ -1.66
MTHFD1-203ENST00000553391 SPATA8Q6RVD6 105 aa4.7□□□□□ -1.66
MTHFD1-203ENST00000553391 SEC61GP60059 68 aa4.69□□□□□ -1.66
MTHFD1-203ENST00000553391 RBM12B-AS1Q9P1G2 102 aa4.68□□□□□ -1.66
MTHFD1-203ENST00000553391 KRTAP19-1Q8IUB9 90 aa4.67□□□□□ -1.66
MTHFD1-203ENST00000553391 KRTAP9-9Q9BYP9 154 aa4.67□□□□□ -1.66
MTHFD1-203ENST00000553391 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
MTHFD1-203ENST00000553391 KRTAP4-1Q9BYQ7 146 aa4.67□□□□□ -1.66
MTHFD1-203ENST00000553391 S4R3F8 94 aa4.67□□□□□ -1.66
MTHFD1-203ENST00000553391 UQCR11O14957 56 aa4.66□□□□□ -1.66
MTHFD1-203ENST00000553391 MIR22HGQ0VDD5 57 aa4.63□□□□□ -1.67
MTHFD1-203ENST00000553391 A0A1B0GU33 70 aa4.62□□□□□ -1.67
MTHFD1-203ENST00000553391 KRTAP10-6P60371 365 aaPredicted RBP4.62□□□□□ -1.67
MTHFD1-203ENST00000553391 PCLOQ9Y6V0 5065 aa4.62□□□□□ -1.67
MTHFD1-203ENST00000553391 KRTAP19-2Q3LHN2 52 aa4.6□□□□□ -1.67
MTHFD1-203ENST00000553391 KRTAP4-8A0A0G2JLE6 195 aa4.59□□□□□ -1.67
MTHFD1-203ENST00000553391 HERC1Q15751 4861 aa4.59□□□□□ -1.67
MTHFD1-203ENST00000553391 CSAG1Q6PB30 78 aa4.59□□□□□ -1.67
MTHFD1-203ENST00000553391 PMAIP1Q13794 54 aa4.56□□□□□ -1.68
MTHFD1-203ENST00000553391 A6NN06 94 aa4.55□□□□□ -1.68
MTHFD1-203ENST00000553391 HMCN2Q8NDA2 5059 aa4.55□□□□□ -1.68
MTHFD1-203ENST00000553391 H0YAA0 97 aa4.54□□□□□ -1.68
MTHFD1-203ENST00000553391 P0C880 135 aa4.51□□□□□ -1.69
MTHFD1-203ENST00000553391 ADM2Q7Z4H4 148 aa4.51□□□□□ -1.69
MTHFD1-203ENST00000553391 KRTAP13-4Q3LI77 160 aa4.48□□□□□ -1.69
MTHFD1-203ENST00000553391 LCE1DQ5T752 114 aa4.45□□□□□ -1.7
MTHFD1-203ENST00000553391 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
MTHFD1-203ENST00000553391 M0QZ58 72 aa4.42□□□□□ -1.7
MTHFD1-203ENST00000553391 KTN1-AS1Q86SY8 53 aa4.39□□□□□ -1.71
MTHFD1-203ENST00000553391 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
MTHFD1-203ENST00000553391 A0A0D9SG42 100 aa4.36□□□□□ -1.71
MTHFD1-203ENST00000553391 K7ERS5 55 aa4.35□□□□□ -1.71
MTHFD1-203ENST00000553391 RNF213Q63HN8 5207 aa4.33□□□□□ -1.72
MTHFD1-203ENST00000553391 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
MTHFD1-203ENST00000553391 KRTAP4-9Q9BYQ8 210 aa4.32□□□□□ -1.72
MTHFD1-203ENST00000553391 MUC2Q02817 5179 aa4.32□□□□□ -1.72
MTHFD1-203ENST00000553391 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
MTHFD1-203ENST00000553391 LCE4AQ5TA78 99 aa4.29□□□□□ -1.72
MTHFD1-203ENST00000553391 R4GN34 69 aa4.29□□□□□ -1.72
MTHFD1-203ENST00000553391 MT1HP80294 61 aa4.28□□□□□ -1.72
MTHFD1-203ENST00000553391 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
MTHFD1-203ENST00000553391 PRAC1Q96KF2 57 aa4.26□□□□□ -1.73
MTHFD1-203ENST00000553391 CRIPTQ9P021 101 aa4.26□□□□□ -1.73
MTHFD1-203ENST00000553391 ROMO1P60602 79 aa4.25□□□□□ -1.73
MTHFD1-203ENST00000553391 KRTAP4-2Q9BYR5 136 aa4.25□□□□□ -1.73
MTHFD1-203ENST00000553391 UBR4Q5T4S7 5183 aa4.23□□□□□ -1.73
MTHFD1-203ENST00000553391 FAT4Q6V0I7 4981 aa4.22□□□□□ -1.73
MTHFD1-203ENST00000553391 LINC01554Q52M75 96 aa4.21□□□□□ -1.74
MTHFD1-203ENST00000553391 M0R2T5 61 aa4.18□□□□□ -1.74
MTHFD1-203ENST00000553391 KRTAP9-8Q9BYQ0 159 aa4.18□□□□□ -1.74
MTHFD1-203ENST00000553391 KRTAP9-7A8MTY7 169 aa4.16□□□□□ -1.74
MTHFD1-203ENST00000553391 KRTAP4-11Q9BYQ6 195 aa4.16□□□□□ -1.74
MTHFD1-203ENST00000553391 MT2AP02795 61 aa4.15□□□□□ -1.75
MTHFD1-203ENST00000553391 SPRR2GQ9BYE4 73 aa4.15□□□□□ -1.75
MTHFD1-203ENST00000553391 KRTAP25-1Q3LHN0 102 aa4.14□□□□□ -1.75
MTHFD1-203ENST00000553391 MT1FP04733 61 aa4.12□□□□□ -1.75
MTHFD1-203ENST00000553391 C10orf95Q9H7T3 257 aa4.11□□□□□ -1.75
MTHFD1-203ENST00000553391 KRTAP10-10P60014 251 aa4.1□□□□□ -1.75
MTHFD1-203ENST00000553391 KRTAP19-4Q3LI73 84 aa4.1□□□□□ -1.75
MTHFD1-203ENST00000553391 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
MTHFD1-203ENST00000553391 KRTAP19-8Q3LI54 63 aa4.04□□□□□ -1.76
MTHFD1-203ENST00000553391 CAMK2N1Q7Z7J9 78 aa4.04□□□□□ -1.76
MTHFD1-203ENST00000553391 KRTAP9-3Q9BYQ3 159 aa4.03□□□□□ -1.76
MTHFD1-203ENST00000553391 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
MTHFD1-203ENST00000553391 H3BS24 57 aa4.01□□□□□ -1.77
MTHFD1-203ENST00000553391 MT1BP07438 61 aa3.96□□□□□ -1.78
MTHFD1-203ENST00000553391 TNP1P09430 55 aa3.9□□□□□ -1.79
MTHFD1-203ENST00000553391 KRTAP23-1A1A580 65 aa3.89□□□□□ -1.79
MTHFD1-203ENST00000553391 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
MTHFD1-203ENST00000553391 KRTAP10-5P60370 271 aa3.86□□□□□ -1.79
MTHFD1-203ENST00000553391 MT1XP80297 61 aa3.85□□□□□ -1.79
MTHFD1-203ENST00000553391 KRTAP5-3Q6L8H2 238 aa3.82□□□□□ -1.8
MTHFD1-203ENST00000553391 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
MTHFD1-203ENST00000553391 PRO2289Q9P1D8 64 aa3.73□□□□□ -1.81
MTHFD1-203ENST00000553391 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
MTHFD1-203ENST00000553391 USH2AO75445 5202 aa3.72□□□□□ -1.81
MTHFD1-203ENST00000553391 KRTAP10-7P60409 375 aaPredicted RBP3.7□□□□□ -1.82
MTHFD1-203ENST00000553391 KRTAP8-1Q8IUC2 63 aa3.69□□□□□ -1.82
MTHFD1-203ENST00000553391 KRTAP10-12P60413 245 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 139.4 ms