RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 NDUFC1O43677 76 aa4.92□□□□□ -1.62
TRAFD1-208ENST00000552890 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.63
TRAFD1-208ENST00000552890 MT2AP02795 61 aa4.89□□□□□ -1.63
TRAFD1-208ENST00000552890 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.88□□□□□ -1.63
TRAFD1-208ENST00000552890 LCA10Q71F78 164 aa4.88□□□□□ -1.63
TRAFD1-208ENST00000552890 SERP2Q8N6R1 65 aa4.87□□□□□ -1.63
TRAFD1-208ENST00000552890 KLKP1Q107X0 134 aa4.86□□□□□ -1.63
TRAFD1-208ENST00000552890 KRTAP9-6A0A140TA67 174 aa4.85□□□□□ -1.63
TRAFD1-208ENST00000552890 SPTSSBQ8NFR3 76 aa4.85□□□□□ -1.63
TRAFD1-208ENST00000552890 ACYP2P14621 99 aa4.84□□□□□ -1.63
TRAFD1-208ENST00000552890 DMAC1Q96GE9 116 aa4.84□□□□□ -1.63
TRAFD1-208ENST00000552890 H0YAA0 97 aa4.83□□□□□ -1.64
TRAFD1-208ENST00000552890 MT1FP04733 61 aa4.83□□□□□ -1.64
TRAFD1-208ENST00000552890 CRIPTQ9P021 101 aa4.82□□□□□ -1.64
TRAFD1-208ENST00000552890 C20orf197Q8N268 126 aa4.81□□□□□ -1.64
TRAFD1-208ENST00000552890 SPANXA2-OT1Q8N9U9 137 aa4.81□□□□□ -1.64
TRAFD1-208ENST00000552890 CRCT1Q9UGL9 99 aa4.8□□□□□ -1.64
TRAFD1-208ENST00000552890 SVIPQ8NHG7 77 aa4.79□□□□□ -1.64
TRAFD1-208ENST00000552890 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
TRAFD1-208ENST00000552890 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
TRAFD1-208ENST00000552890 KRTAP19-1Q8IUB9 90 aa4.77□□□□□ -1.65
TRAFD1-208ENST00000552890 CHKB-CPT1BH3BT56 60 aa4.75□□□□□ -1.65
TRAFD1-208ENST00000552890 COX7CP15954 63 aa4.75□□□□□ -1.65
TRAFD1-208ENST00000552890 SNURFQ9Y675 71 aa4.75□□□□□ -1.65
TRAFD1-208ENST00000552890 ANAPC13Q9BS18 74 aa4.69□□□□□ -1.66
TRAFD1-208ENST00000552890 ADM2Q7Z4H4 148 aa4.68□□□□□ -1.66
TRAFD1-208ENST00000552890 SPRR2GQ9BYE4 73 aa4.68□□□□□ -1.66
TRAFD1-208ENST00000552890 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
TRAFD1-208ENST00000552890 FSIP2Q5CZC0 6907 aa4.65□□□□□ -1.66
TRAFD1-208ENST00000552890 Q5VV11 94 aa4.65□□□□□ -1.67
TRAFD1-208ENST00000552890 KRTAP9-9Q9BYP9 154 aa4.65□□□□□ -1.67
TRAFD1-208ENST00000552890 KRTAP9-4Q9BYQ2 154 aa4.65□□□□□ -1.67
TRAFD1-208ENST00000552890 R4GN34 69 aa4.63□□□□□ -1.67
TRAFD1-208ENST00000552890 ATP5EP56381 51 aaPredicted RBP4.6□□□□□ -1.67
TRAFD1-208ENST00000552890 SEC61GP60059 68 aa4.6□□□□□ -1.67
TRAFD1-208ENST00000552890 H7BZZ5 65 aa4.59□□□□□ -1.67
TRAFD1-208ENST00000552890 KRTAP19-8Q3LI54 63 aa4.59□□□□□ -1.67
TRAFD1-208ENST00000552890 KRTAP19-6Q3LI70 58 aa4.59□□□□□ -1.67
TRAFD1-208ENST00000552890 KRTAP4-8A0A0G2JLE6 195 aa4.58□□□□□ -1.68
TRAFD1-208ENST00000552890 COA5Q86WW8 74 aa4.57□□□□□ -1.68
TRAFD1-208ENST00000552890 M0QZ58 72 aa4.56□□□□□ -1.68
TRAFD1-208ENST00000552890 SERP1Q9Y6X1 66 aa4.55□□□□□ -1.68
TRAFD1-208ENST00000552890 USH2AO75445 5202 aa4.55□□□□□ -1.68
TRAFD1-208ENST00000552890 PLAC4Q8WY50 150 aa4.54□□□□□ -1.68
TRAFD1-208ENST00000552890 P0C880 135 aa4.52□□□□□ -1.69
TRAFD1-208ENST00000552890 PRO2289Q9P1D8 64 aa4.51□□□□□ -1.69
TRAFD1-208ENST00000552890 A6NN06 94 aa4.5□□□□□ -1.69
TRAFD1-208ENST00000552890 LCE4AQ5TA78 99 aa4.5□□□□□ -1.69
TRAFD1-208ENST00000552890 MT1BP07438 61 aa4.48□□□□□ -1.69
TRAFD1-208ENST00000552890 TMEM258P61165 79 aa4.48□□□□□ -1.69
TRAFD1-208ENST00000552890 CCDC179H3BU77 68 aa4.47□□□□□ -1.69
TRAFD1-208ENST00000552890 KRTAP4-7Q9BYR0 210 aa4.45□□□□□ -1.7
TRAFD1-208ENST00000552890 LINC01554Q52M75 96 aa4.44□□□□□ -1.7
TRAFD1-208ENST00000552890 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
TRAFD1-208ENST00000552890 CYSTM1Q9H1C7 97 aa4.44□□□□□ -1.7
TRAFD1-208ENST00000552890 SSPOA2VEC9 5147 aa4.43□□□□□ -1.7
TRAFD1-208ENST00000552890 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
TRAFD1-208ENST00000552890 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
TRAFD1-208ENST00000552890 FCGBPQ9Y6R7 5405 aaPredicted RBP4.41□□□□□ -1.7
TRAFD1-208ENST00000552890 A0A1B0GU69 56 aa4.4□□□□□ -1.71
TRAFD1-208ENST00000552890 A0A1B0GU33 70 aa4.39□□□□□ -1.71
TRAFD1-208ENST00000552890 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
TRAFD1-208ENST00000552890 SMIM26A0A096LP01 95 aa4.34□□□□□ -1.71
TRAFD1-208ENST00000552890 V9GYY9 64 aa4.31□□□□□ -1.72
TRAFD1-208ENST00000552890 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
TRAFD1-208ENST00000552890 LINC01558Q9Y6Z2 57 aa4.3□□□□□ -1.72
TRAFD1-208ENST00000552890 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
TRAFD1-208ENST00000552890 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
TRAFD1-208ENST00000552890 MT1XP80297 61 aa4.26□□□□□ -1.73
TRAFD1-208ENST00000552890 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
TRAFD1-208ENST00000552890 KRTAP12-2P59991 146 aa4.25□□□□□ -1.73
TRAFD1-208ENST00000552890 KRTAP4-9Q9BYQ8 210 aa4.25□□□□□ -1.73
TRAFD1-208ENST00000552890 UQCR11O14957 56 aa4.24□□□□□ -1.73
TRAFD1-208ENST00000552890 KRTAP13-4Q3LI77 160 aa4.24□□□□□ -1.73
TRAFD1-208ENST00000552890 A0A0D9SG42 100 aa4.23□□□□□ -1.73
TRAFD1-208ENST00000552890 MACF1Q9UPN3 7388 aaKnown RBP4.23□□□□□ -1.73
TRAFD1-208ENST00000552890 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
TRAFD1-208ENST00000552890 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
TRAFD1-208ENST00000552890 PCP4P48539 62 aa4.18□□□□□ -1.74
TRAFD1-208ENST00000552890 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
TRAFD1-208ENST00000552890 RPS28P62857 69 aaKnown RBP4.17□□□□□ -1.74
TRAFD1-208ENST00000552890 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
TRAFD1-208ENST00000552890 Q1T7F1 81 aa4.16□□□□□ -1.74
TRAFD1-208ENST00000552890 K7ERS5 55 aa4.15□□□□□ -1.75
TRAFD1-208ENST00000552890 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
TRAFD1-208ENST00000552890 LCE5AQ5TCM9 118 aa4.13□□□□□ -1.75
TRAFD1-208ENST00000552890 KRTAP5-9P26371 169 aa4.12□□□□□ -1.75
TRAFD1-208ENST00000552890 KRTAP8-1Q8IUC2 63 aa4.12□□□□□ -1.75
TRAFD1-208ENST00000552890 KRTAP4-11Q9BYQ6 195 aa4.12□□□□□ -1.75
TRAFD1-208ENST00000552890 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
TRAFD1-208ENST00000552890 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
TRAFD1-208ENST00000552890 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
TRAFD1-208ENST00000552890 A8MU10 97 aa4.07□□□□□ -1.76
TRAFD1-208ENST00000552890 PSPHP1O15172 72 aa4.05□□□□□ -1.76
TRAFD1-208ENST00000552890 KRTAP10-7P60409 375 aaPredicted RBP4.04□□□□□ -1.76
TRAFD1-208ENST00000552890 SPRR2FQ96RM1 72 aa4.04□□□□□ -1.76
TRAFD1-208ENST00000552890 TNP1P09430 55 aa4.03□□□□□ -1.76
TRAFD1-208ENST00000552890 A6NED7 52 aa4.02□□□□□ -1.77
TRAFD1-208ENST00000552890 A0A0A0MQY5 61 aa3.96□□□□□ -1.78
TRAFD1-208ENST00000552890 KMT2DO14686 5537 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms