RNA–Protein interactions for RNA: ENST00000552801.6

TMEM116-217, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 1,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-217ENST00000552801 KRTAP5-3Q6L8H2 238 aa4.63□□□□□ -1.67
TMEM116-217ENST00000552801 TRAV22A0A0B4J277 110 aa4.62□□□□□ -1.67
TMEM116-217ENST00000552801 SPANXA2-OT1Q8N9U9 137 aa4.62□□□□□ -1.67
TMEM116-217ENST00000552801 MMP24-AS1A0A0U1RRL7 71 aa4.61□□□□□ -1.67
TMEM116-217ENST00000552801 MP68P56378 58 aa4.61□□□□□ -1.67
TMEM116-217ENST00000552801 CASC2Q6XLA1 102 aa4.61□□□□□ -1.67
TMEM116-217ENST00000552801 PRO0628Q9UI54 55 aa4.61□□□□□ -1.67
TMEM116-217ENST00000552801 WFDC13Q8IUB5 93 aa4.59□□□□□ -1.67
TMEM116-217ENST00000552801 C1orf64Q8NEQ6 169 aa4.59□□□□□ -1.67
TMEM116-217ENST00000552801 Q96NJ1 140 aa4.59□□□□□ -1.67
TMEM116-217ENST00000552801 Q1T7F1 81 aa4.58□□□□□ -1.68
TMEM116-217ENST00000552801 H0Y9P7 68 aa4.57□□□□□ -1.68
TMEM116-217ENST00000552801 DEFB116Q30KQ4 102 aa4.57□□□□□ -1.68
TMEM116-217ENST00000552801 Q75L30 129 aa4.56□□□□□ -1.68
TMEM116-217ENST00000552801 TP53AIP1Q9HCN2 124 aa4.55□□□□□ -1.68
TMEM116-217ENST00000552801 LINC00208Q96KT6 92 aa4.54□□□□□ -1.68
TMEM116-217ENST00000552801 IGKV2-30P06310 120 aa4.53□□□□□ -1.68
TMEM116-217ENST00000552801 A0A1B0GVX0 72 aa4.53□□□□□ -1.69
TMEM116-217ENST00000552801 Q8N9P0 234 aaPredicted RBP4.53□□□□□ -1.69
TMEM116-217ENST00000552801 MPLKIPQ8TAP9 179 aa4.53□□□□□ -1.69
TMEM116-217ENST00000552801 C8orf17Q9NRJ1 99 aa4.53□□□□□ -1.69
TMEM116-217ENST00000552801 V9GYY9 64 aa4.53□□□□□ -1.69
TMEM116-217ENST00000552801 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
TMEM116-217ENST00000552801 MRPL34Q9BQ48 92 aaKnown RBP4.48□□□□□ -1.69
TMEM116-217ENST00000552801 RBM12B-AS1Q9P1G2 102 aa4.46□□□□□ -1.7
TMEM116-217ENST00000552801 C8orf87E5RJ46 101 aa4.45□□□□□ -1.7
TMEM116-217ENST00000552801 C20orf166-AS1Q96NR2 134 aa4.45□□□□□ -1.7
TMEM116-217ENST00000552801 FLGP20930 4061 aaPredicted RBP4.44□□□□□ -1.7
TMEM116-217ENST00000552801 IGHV6-1A0A0B4J1U7 121 aa4.44□□□□□ -1.7
TMEM116-217ENST00000552801 LOC101927531A0A1B0GV80 90 aa4.44□□□□□ -1.7
TMEM116-217ENST00000552801 A8MUU9 505 aa4.44□□□□□ -1.7
TMEM116-217ENST00000552801 Q5VV11 94 aa4.44□□□□□ -1.7
TMEM116-217ENST00000552801 COA5Q86WW8 74 aa4.44□□□□□ -1.7
TMEM116-217ENST00000552801 LINC00313P59037 77 aa4.43□□□□□ -1.7
TMEM116-217ENST00000552801 A8MUN3 132 aa4.41□□□□□ -1.7
TMEM116-217ENST00000552801 PSPHP1O15172 72 aa4.4□□□□□ -1.7
TMEM116-217ENST00000552801 NOTCH2NLQ7Z3S9 236 aa4.4□□□□□ -1.7
TMEM116-217ENST00000552801 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
TMEM116-217ENST00000552801 LINC01558Q9Y6Z2 57 aa4.39□□□□□ -1.71
TMEM116-217ENST00000552801 NDUFS5O43920 106 aa4.38□□□□□ -1.71
TMEM116-217ENST00000552801 KRTAP10-10P60014 251 aa4.38□□□□□ -1.71
TMEM116-217ENST00000552801 HRES1P13985 223 aa4.37□□□□□ -1.71
TMEM116-217ENST00000552801 PRR15LQ9BU68 103 aa4.37□□□□□ -1.71
TMEM116-217ENST00000552801 LCE1AQ5T7P2 110 aa4.36□□□□□ -1.71
TMEM116-217ENST00000552801 Q5W150 140 aa4.36□□□□□ -1.71
TMEM116-217ENST00000552801 KRTAP16-1A8MUX0 517 aa4.35□□□□□ -1.71
TMEM116-217ENST00000552801 DMAC1Q96GE9 116 aa4.35□□□□□ -1.71
TMEM116-217ENST00000552801 MT2AP02795 61 aa4.34□□□□□ -1.71
TMEM116-217ENST00000552801 CHKB-CPT1BH3BT56 60 aa4.33□□□□□ -1.72
TMEM116-217ENST00000552801 IGKV2D-30A0A075B6S6 120 aa4.32□□□□□ -1.72
TMEM116-217ENST00000552801 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
TMEM116-217ENST00000552801 MT1FP04733 61 aa4.29□□□□□ -1.72
TMEM116-217ENST00000552801 ACYP2P14621 99 aa4.29□□□□□ -1.72
TMEM116-217ENST00000552801 LCA10Q71F78 164 aa4.29□□□□□ -1.72
TMEM116-217ENST00000552801 A6NED7 52 aa4.27□□□□□ -1.73
TMEM116-217ENST00000552801 A8MU10 97 aa4.27□□□□□ -1.73
TMEM116-217ENST00000552801 PMAIP1Q13794 54 aa4.27□□□□□ -1.73
TMEM116-217ENST00000552801 USH2AO75445 5202 aa4.27□□□□□ -1.73
TMEM116-217ENST00000552801 SPINK7P58062 85 aa4.27□□□□□ -1.73
TMEM116-217ENST00000552801 A6NN06 94 aa4.26□□□□□ -1.73
TMEM116-217ENST00000552801 SSPOA2VEC9 5147 aa4.25□□□□□ -1.73
TMEM116-217ENST00000552801 KTN1-AS1Q86SY8 53 aa4.23□□□□□ -1.73
TMEM116-217ENST00000552801 FCGBPQ9Y6R7 5405 aaPredicted RBP4.22□□□□□ -1.73
TMEM116-217ENST00000552801 A0A0A0MQY5 61 aa4.18□□□□□ -1.74
TMEM116-217ENST00000552801 C7orf65Q6ZTY9 151 aa4.18□□□□□ -1.74
TMEM116-217ENST00000552801 KRTAP19-6Q3LI70 58 aa4.17□□□□□ -1.74
TMEM116-217ENST00000552801 SPTSSBQ8NFR3 76 aa4.17□□□□□ -1.74
TMEM116-217ENST00000552801 A0A1B0GU69 56 aa4.15□□□□□ -1.74
TMEM116-217ENST00000552801 SPATA8Q6RVD6 105 aa4.15□□□□□ -1.74
TMEM116-217ENST00000552801 H1FX-AS1Q4G0G2 97 aa4.14□□□□□ -1.75
TMEM116-217ENST00000552801 SEC61GP60059 68 aa4.14□□□□□ -1.75
TMEM116-217ENST00000552801 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
TMEM116-217ENST00000552801 UQCR11O14957 56 aa4.11□□□□□ -1.75
TMEM116-217ENST00000552801 MIR22HGQ0VDD5 57 aa4.09□□□□□ -1.75
TMEM116-217ENST00000552801 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.76
TMEM116-217ENST00000552801 KRTAP6-3Q3LI67 103 aa4.08□□□□□ -1.76
TMEM116-217ENST00000552801 KRTAP2-2Q9BYT5 123 aa4.03□□□□□ -1.76
TMEM116-217ENST00000552801 S4R3F8 94 aa4□□□□□ -1.77
TMEM116-217ENST00000552801 H0YAA0 97 aa3.99□□□□□ -1.77
TMEM116-217ENST00000552801 CSAG1Q6PB30 78 aa3.99□□□□□ -1.77
TMEM116-217ENST00000552801 MT3P25713 68 aa3.97□□□□□ -1.77
TMEM116-217ENST00000552801 A0A1B0GU33 70 aa3.94□□□□□ -1.78
TMEM116-217ENST00000552801 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
TMEM116-217ENST00000552801 ADM2Q7Z4H4 148 aa3.93□□□□□ -1.78
TMEM116-217ENST00000552801 KRTAP20-1Q3LI63 56 aa3.91□□□□□ -1.78
TMEM116-217ENST00000552801 NEBP20929 6669 aa3.89□□□□□ -1.79
TMEM116-217ENST00000552801 SPRR2GQ9BYE4 73 aa3.89□□□□□ -1.79
TMEM116-217ENST00000552801 MT1BP07438 61 aa3.88□□□□□ -1.79
TMEM116-217ENST00000552801 LINC01554Q52M75 96 aa3.88□□□□□ -1.79
TMEM116-217ENST00000552801 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
TMEM116-217ENST00000552801 KRTAP19-8Q3LI54 63 aa3.87□□□□□ -1.79
TMEM116-217ENST00000552801 CRIPTQ9P021 101 aa3.86□□□□□ -1.79
TMEM116-217ENST00000552801 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
TMEM116-217ENST00000552801 K7ERS5 55 aa3.81□□□□□ -1.8
TMEM116-217ENST00000552801 KRTAP25-1Q3LHN0 102 aa3.81□□□□□ -1.8
TMEM116-217ENST00000552801 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
TMEM116-217ENST00000552801 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
TMEM116-217ENST00000552801 PRO2289Q9P1D8 64 aa3.79□□□□□ -1.8
TMEM116-217ENST00000552801 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
TMEM116-217ENST00000552801 ROMO1P60602 79 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms