RNA–Protein interactions for RNA: ENST00000552388.1

CDK4-212, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-212ENST00000552388 S4R3F8 94 aa6.26□□□□□ -1.41
CDK4-212ENST00000552388 MT1FP04733 61 aa6.24□□□□□ -1.41
CDK4-212ENST00000552388 LCA10Q71F78 164 aa6.23□□□□□ -1.41
CDK4-212ENST00000552388 A8MUN3 132 aa6.22□□□□□ -1.41
CDK4-212ENST00000552388 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
CDK4-212ENST00000552388 CSAG1Q6PB30 78 aa6.19□□□□□ -1.42
CDK4-212ENST00000552388 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
CDK4-212ENST00000552388 SERP2Q8N6R1 65 aa6.17□□□□□ -1.42
CDK4-212ENST00000552388 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
CDK4-212ENST00000552388 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
CDK4-212ENST00000552388 LCE2BO14633 110 aa6.13□□□□□ -1.43
CDK4-212ENST00000552388 DMAC1Q96GE9 116 aa6.13□□□□□ -1.43
CDK4-212ENST00000552388 SNURFQ9Y675 71 aa6.11□□□□□ -1.43
CDK4-212ENST00000552388 NDUFC1O43677 76 aa6.1□□□□□ -1.43
CDK4-212ENST00000552388 C20orf197Q8N268 126 aa6.09□□□□□ -1.43
CDK4-212ENST00000552388 MACF1Q9UPN3 7388 aaKnown RBP6.08□□□□□ -1.44
CDK4-212ENST00000552388 COX7CP15954 63 aa6.05□□□□□ -1.44
CDK4-212ENST00000552388 SYNE2Q8WXH0 6885 aaKnown RBP6.04□□□□□ -1.44
CDK4-212ENST00000552388 ACYP2P14621 99 aa6.03□□□□□ -1.44
CDK4-212ENST00000552388 SPANXA2-OT1Q8N9U9 137 aa6.02□□□□□ -1.45
CDK4-212ENST00000552388 H0YAA0 97 aa6.01□□□□□ -1.45
CDK4-212ENST00000552388 KRTAP19-6Q3LI70 58 aa6.01□□□□□ -1.45
CDK4-212ENST00000552388 ANAPC13Q9BS18 74 aa5.95□□□□□ -1.46
CDK4-212ENST00000552388 SPRR2GQ9BYE4 73 aa5.93□□□□□ -1.46
CDK4-212ENST00000552388 CRIPTQ9P021 101 aa5.93□□□□□ -1.46
CDK4-212ENST00000552388 ADM2Q7Z4H4 148 aa5.92□□□□□ -1.46
CDK4-212ENST00000552388 H7BZZ5 65 aa5.91□□□□□ -1.46
CDK4-212ENST00000552388 CYSTM1Q9H1C7 97 aa5.91□□□□□ -1.46
CDK4-212ENST00000552388 KRTAP6-3Q3LI67 103 aa5.9□□□□□ -1.46
CDK4-212ENST00000552388 CHKB-CPT1BH3BT56 60 aa5.89□□□□□ -1.47
CDK4-212ENST00000552388 SPTSSBQ8NFR3 76 aa5.89□□□□□ -1.47
CDK4-212ENST00000552388 KRTAP19-8Q3LI54 63 aa5.85□□□□□ -1.47
CDK4-212ENST00000552388 CCDC179H3BU77 68 aa5.84□□□□□ -1.47
CDK4-212ENST00000552388 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
CDK4-212ENST00000552388 P0C880 135 aa5.82□□□□□ -1.48
CDK4-212ENST00000552388 COA5Q86WW8 74 aa5.82□□□□□ -1.48
CDK4-212ENST00000552388 MT1BP07438 61 aa5.8□□□□□ -1.48
CDK4-212ENST00000552388 Q5VV11 94 aa5.8□□□□□ -1.48
CDK4-212ENST00000552388 NEBP20929 6669 aa5.77□□□□□ -1.49
CDK4-212ENST00000552388 R4GN34 69 aa5.75□□□□□ -1.49
CDK4-212ENST00000552388 MUC12Q9UKN1 5478 aa5.73□□□□□ -1.49
CDK4-212ENST00000552388 M0QZ58 72 aa5.71□□□□□ -1.5
CDK4-212ENST00000552388 ATP5EP56381 51 aaPredicted RBP5.7□□□□□ -1.5
CDK4-212ENST00000552388 TMEM258P61165 79 aa5.65□□□□□ -1.5
CDK4-212ENST00000552388 A6NN06 94 aa5.62□□□□□ -1.51
CDK4-212ENST00000552388 KRTAP10-5P60370 271 aa5.62□□□□□ -1.51
CDK4-212ENST00000552388 SEC61GP60059 68 aa5.6□□□□□ -1.51
CDK4-212ENST00000552388 LINC01554Q52M75 96 aa5.6□□□□□ -1.51
CDK4-212ENST00000552388 PLAC4Q8WY50 150 aa5.6□□□□□ -1.51
CDK4-212ENST00000552388 SERP1Q9Y6X1 66 aa5.6□□□□□ -1.51
CDK4-212ENST00000552388 KRTAP20-1Q3LI63 56 aa5.57□□□□□ -1.52
CDK4-212ENST00000552388 KRTAP5-9P26371 169 aa5.56□□□□□ -1.52
CDK4-212ENST00000552388 KRTAP13-4Q3LI77 160 aa5.55□□□□□ -1.52
CDK4-212ENST00000552388 MDN1Q9NU22 5596 aa5.52□□□□□ -1.53
CDK4-212ENST00000552388 A0A1B0GU69 56 aa5.51□□□□□ -1.53
CDK4-212ENST00000552388 KMT2DO14686 5537 aa5.51□□□□□ -1.53
CDK4-212ENST00000552388 MT1XP80297 61 aa5.5□□□□□ -1.53
CDK4-212ENST00000552388 A0A1B0GU33 70 aa5.49□□□□□ -1.53
CDK4-212ENST00000552388 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
CDK4-212ENST00000552388 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
CDK4-212ENST00000552388 SPATA8Q6RVD6 105 aa5.44□□□□□ -1.54
CDK4-212ENST00000552388 PRR15LQ9BU68 103 aa5.42□□□□□ -1.54
CDK4-212ENST00000552388 PCP4P48539 62 aa5.41□□□□□ -1.54
CDK4-212ENST00000552388 A0A0D9SG42 100 aa5.38□□□□□ -1.55
CDK4-212ENST00000552388 SMIM26A0A096LP01 95 aa5.35□□□□□ -1.55
CDK4-212ENST00000552388 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
CDK4-212ENST00000552388 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
CDK4-212ENST00000552388 KRTAP12-2P59991 146 aa5.34□□□□□ -1.55
CDK4-212ENST00000552388 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
CDK4-212ENST00000552388 CAMK2N1Q7Z7J9 78 aa5.31□□□□□ -1.56
CDK4-212ENST00000552388 SPINT4Q6UDR6 99 aa5.29□□□□□ -1.56
CDK4-212ENST00000552388 V9GYY9 64 aa5.29□□□□□ -1.56
CDK4-212ENST00000552388 A8MU10 97 aa5.28□□□□□ -1.56
CDK4-212ENST00000552388 Q1T7F1 81 aa5.27□□□□□ -1.57
CDK4-212ENST00000552388 UQCR11O14957 56 aa5.26□□□□□ -1.57
CDK4-212ENST00000552388 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
CDK4-212ENST00000552388 KRTAP10-12P60413 245 aa5.24□□□□□ -1.57
CDK4-212ENST00000552388 RPS28P62857 69 aaKnown RBP5.24□□□□□ -1.57
CDK4-212ENST00000552388 PSPHP1O15172 72 aa5.19□□□□□ -1.58
CDK4-212ENST00000552388 KRTAP4-8A0A0G2JLE6 195 aa5.18□□□□□ -1.58
CDK4-212ENST00000552388 KRTAP4-8Q9BYQ9 185 aa5.18□□□□□ -1.58
CDK4-212ENST00000552388 SPRR2EP22531 72 aa5.17□□□□□ -1.58
CDK4-212ENST00000552388 SPRR2BP35325 72 aa5.17□□□□□ -1.58
CDK4-212ENST00000552388 SPRR2AP35326 72 aa5.17□□□□□ -1.58
CDK4-212ENST00000552388 KRTAP8-1Q8IUC2 63 aa5.17□□□□□ -1.58
CDK4-212ENST00000552388 SPRR2FQ96RM1 72 aa5.17□□□□□ -1.58
CDK4-212ENST00000552388 KRTAP2-2Q9BYT5 123 aa5.16□□□□□ -1.58
CDK4-212ENST00000552388 KRTAP2-1Q9BYU5 128 aa5.16□□□□□ -1.58
CDK4-212ENST00000552388 MIR22HGQ0VDD5 57 aa5.15□□□□□ -1.59
CDK4-212ENST00000552388 LCE1AQ5T7P2 110 aa5.15□□□□□ -1.59
CDK4-212ENST00000552388 C10orf95Q9H7T3 257 aa5.06□□□□□ -1.6
CDK4-212ENST00000552388 A6NED7 52 aa5.04□□□□□ -1.6
CDK4-212ENST00000552388 SPRR2DP22532 72 aa5.01□□□□□ -1.61
CDK4-212ENST00000552388 K7ERS5 55 aa5□□□□□ -1.61
CDK4-212ENST00000552388 TNP1P09430 55 aa4.99□□□□□ -1.61
CDK4-212ENST00000552388 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
CDK4-212ENST00000552388 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
CDK4-212ENST00000552388 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
CDK4-212ENST00000552388 LCE3AQ5TA76 89 aa4.87□□□□□ -1.63
CDK4-212ENST00000552388 MT1EP04732 61 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms