RNA–Protein interactions for RNA: ENST00000551223.5

PFDN5-215, Transcript of prefoldin subunit 5, humanhuman

TSL 4

Gene PFDN5, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-215ENST00000551223 KRTAP3-3Q9BYR6 98 aa4.43□□□□□ -1.7
PFDN5-215ENST00000551223 TRAV7A0A075B6U4 112 aa4.41□□□□□ -1.7
PFDN5-215ENST00000551223 A8MUN3 132 aa4.41□□□□□ -1.7
PFDN5-215ENST00000551223 SMIM20Q8N5G0 67 aa4.41□□□□□ -1.7
PFDN5-215ENST00000551223 USH2AO75445 5202 aa4.39□□□□□ -1.71
PFDN5-215ENST00000551223 NDUFC1O43677 76 aa4.36□□□□□ -1.71
PFDN5-215ENST00000551223 DMAC1Q96GE9 116 aa4.34□□□□□ -1.71
PFDN5-215ENST00000551223 SSPOA2VEC9 5147 aa4.34□□□□□ -1.72
PFDN5-215ENST00000551223 KRTAP19-1Q8IUB9 90 aa4.32□□□□□ -1.72
PFDN5-215ENST00000551223 SERP2Q8N6R1 65 aa4.31□□□□□ -1.72
PFDN5-215ENST00000551223 SNURFQ9Y675 71 aa4.31□□□□□ -1.72
PFDN5-215ENST00000551223 H0YAA0 97 aa4.28□□□□□ -1.72
PFDN5-215ENST00000551223 C20orf197Q8N268 126 aa4.28□□□□□ -1.72
PFDN5-215ENST00000551223 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.72
PFDN5-215ENST00000551223 ACYP2P14621 99 aa4.26□□□□□ -1.73
PFDN5-215ENST00000551223 ADM2Q7Z4H4 148 aa4.25□□□□□ -1.73
PFDN5-215ENST00000551223 CRIPTQ9P021 101 aa4.25□□□□□ -1.73
PFDN5-215ENST00000551223 KRTAP19-6Q3LI70 58 aa4.24□□□□□ -1.73
PFDN5-215ENST00000551223 KRTAP19-8Q3LI54 63 aa4.23□□□□□ -1.73
PFDN5-215ENST00000551223 SPANXA2-OT1Q8N9U9 137 aa4.22□□□□□ -1.73
PFDN5-215ENST00000551223 FCGBPQ9Y6R7 5405 aaPredicted RBP4.21□□□□□ -1.73
PFDN5-215ENST00000551223 MT1BP07438 61 aa4.21□□□□□ -1.74
PFDN5-215ENST00000551223 COX7CP15954 63 aa4.21□□□□□ -1.74
PFDN5-215ENST00000551223 Q5VV11 94 aa4.2□□□□□ -1.74
PFDN5-215ENST00000551223 P0C880 135 aa4.18□□□□□ -1.74
PFDN5-215ENST00000551223 KRTAP3-2Q9BYR7 98 aa4.18□□□□□ -1.74
PFDN5-215ENST00000551223 CHKB-CPT1BH3BT56 60 aa4.17□□□□□ -1.74
PFDN5-215ENST00000551223 SPTSSBQ8NFR3 76 aa4.17□□□□□ -1.74
PFDN5-215ENST00000551223 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.16□□□□□ -1.74
PFDN5-215ENST00000551223 CYSTM1Q9H1C7 97 aa4.14□□□□□ -1.75
PFDN5-215ENST00000551223 ANAPC13Q9BS18 74 aa4.13□□□□□ -1.75
PFDN5-215ENST00000551223 H7BZZ5 65 aa4.12□□□□□ -1.75
PFDN5-215ENST00000551223 R4GN34 69 aa4.12□□□□□ -1.75
PFDN5-215ENST00000551223 A6NN06 94 aa4.1□□□□□ -1.75
PFDN5-215ENST00000551223 M0QZ58 72 aa4.1□□□□□ -1.75
PFDN5-215ENST00000551223 COA5Q86WW8 74 aa4.1□□□□□ -1.75
PFDN5-215ENST00000551223 KRTAP10-5P60370 271 aa4.08□□□□□ -1.76
PFDN5-215ENST00000551223 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
PFDN5-215ENST00000551223 CCDC179H3BU77 68 aa4.06□□□□□ -1.76
PFDN5-215ENST00000551223 MACF1Q9UPN3 7388 aaKnown RBP4.05□□□□□ -1.76
PFDN5-215ENST00000551223 SYNE2Q8WXH0 6885 aaKnown RBP4.04□□□□□ -1.76
PFDN5-215ENST00000551223 LINC01554Q52M75 96 aa4.04□□□□□ -1.76
PFDN5-215ENST00000551223 PLAC4Q8WY50 150 aa4.03□□□□□ -1.76
PFDN5-215ENST00000551223 MT1XP80297 61 aa3.98□□□□□ -1.77
PFDN5-215ENST00000551223 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
PFDN5-215ENST00000551223 PRO2289Q9P1D8 64 aa3.97□□□□□ -1.77
PFDN5-215ENST00000551223 SEC61GP60059 68 aa3.96□□□□□ -1.78
PFDN5-215ENST00000551223 SERP1Q9Y6X1 66 aa3.95□□□□□ -1.78
PFDN5-215ENST00000551223 ATP5EP56381 51 aaPredicted RBP3.94□□□□□ -1.78
PFDN5-215ENST00000551223 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
PFDN5-215ENST00000551223 A0A1B0GU33 70 aa3.9□□□□□ -1.79
PFDN5-215ENST00000551223 TMEM258P61165 79 aa3.9□□□□□ -1.79
PFDN5-215ENST00000551223 A0A1B0GU69 56 aa3.88□□□□□ -1.79
PFDN5-215ENST00000551223 SPATA8Q6RVD6 105 aa3.87□□□□□ -1.79
PFDN5-215ENST00000551223 A0A0D9SG42 100 aa3.85□□□□□ -1.79
PFDN5-215ENST00000551223 KRTAP12-2P59991 146 aa3.85□□□□□ -1.79
PFDN5-215ENST00000551223 SVIPQ8NHG7 77 aa3.84□□□□□ -1.79
PFDN5-215ENST00000551223 KRTAP5-9P26371 169 aa3.82□□□□□ -1.8
PFDN5-215ENST00000551223 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
PFDN5-215ENST00000551223 CAMK2N1Q7Z7J9 78 aa3.81□□□□□ -1.8
PFDN5-215ENST00000551223 LINC01558Q9Y6Z2 57 aa3.81□□□□□ -1.8
PFDN5-215ENST00000551223 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
PFDN5-215ENST00000551223 PRR15LQ9BU68 103 aa3.79□□□□□ -1.8
PFDN5-215ENST00000551223 NEBP20929 6669 aa3.78□□□□□ -1.8
PFDN5-215ENST00000551223 SMIM26A0A096LP01 95 aa3.78□□□□□ -1.8
PFDN5-215ENST00000551223 KRTAP4-8A0A0G2JLE6 195 aa3.78□□□□□ -1.8
PFDN5-215ENST00000551223 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
PFDN5-215ENST00000551223 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
PFDN5-215ENST00000551223 KRTAP4-8Q9BYQ9 185 aa3.78□□□□□ -1.8
PFDN5-215ENST00000551223 KMT2DO14686 5537 aa3.77□□□□□ -1.81
PFDN5-215ENST00000551223 KRTAP8-1Q8IUC2 63 aa3.77□□□□□ -1.81
PFDN5-215ENST00000551223 A8MU10 97 aa3.76□□□□□ -1.81
PFDN5-215ENST00000551223 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
PFDN5-215ENST00000551223 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
PFDN5-215ENST00000551223 UQCR11O14957 56 aa3.68□□□□□ -1.82
PFDN5-215ENST00000551223 PCP4P48539 62 aa3.68□□□□□ -1.82
PFDN5-215ENST00000551223 SPRR2EP22531 72 aa3.65□□□□□ -1.83
PFDN5-215ENST00000551223 SPRR2BP35325 72 aa3.65□□□□□ -1.83
PFDN5-215ENST00000551223 SPRR2AP35326 72 aa3.65□□□□□ -1.83
PFDN5-215ENST00000551223 Q1T7F1 81 aa3.65□□□□□ -1.83
PFDN5-215ENST00000551223 V9GYY9 64 aa3.65□□□□□ -1.83
PFDN5-215ENST00000551223 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
PFDN5-215ENST00000551223 PSPHP1O15172 72 aa3.63□□□□□ -1.83
PFDN5-215ENST00000551223 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
PFDN5-215ENST00000551223 MIR22HGQ0VDD5 57 aa3.62□□□□□ -1.83
PFDN5-215ENST00000551223 C10orf95Q9H7T3 257 aa3.61□□□□□ -1.83
PFDN5-215ENST00000551223 RPS28P62857 69 aaKnown RBP3.59□□□□□ -1.83
PFDN5-215ENST00000551223 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
PFDN5-215ENST00000551223 TNP1P09430 55 aa3.56□□□□□ -1.84
PFDN5-215ENST00000551223 KRTAP19-7Q3SYF9 63 aa3.56□□□□□ -1.84
PFDN5-215ENST00000551223 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
PFDN5-215ENST00000551223 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
PFDN5-215ENST00000551223 MT1EP04732 61 aa3.52□□□□□ -1.85
PFDN5-215ENST00000551223 SPRR2DP22532 72 aa3.52□□□□□ -1.85
PFDN5-215ENST00000551223 A6NED7 52 aa3.51□□□□□ -1.85
PFDN5-215ENST00000551223 KRTAP19-5Q3LI72 72 aa3.51□□□□□ -1.85
PFDN5-215ENST00000551223 K7ERS5 55 aa3.5□□□□□ -1.85
PFDN5-215ENST00000551223 LCE3AQ5TA76 89 aa3.5□□□□□ -1.85
PFDN5-215ENST00000551223 KRTAP19-3Q7Z4W3 81 aa3.46□□□□□ -1.86
PFDN5-215ENST00000551223 LCE5AQ5TCM9 118 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms