RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 LCA10Q71F78 164 aa7.2□□□□□ -1.26
PRPF40B-211ENST00000551063 SCGB1A1P11684 91 aa7.19□□□□□ -1.26
PRPF40B-211ENST00000551063 MP68P56378 58 aa7.17□□□□□ -1.26
PRPF40B-211ENST00000551063 LINC00208Q96KT6 92 aa7.15□□□□□ -1.26
PRPF40B-211ENST00000551063 SMIM20Q8N5G0 67 aa7.13□□□□□ -1.27
PRPF40B-211ENST00000551063 A8MUN3 132 aa7.11□□□□□ -1.27
PRPF40B-211ENST00000551063 KRTAP3-3Q9BYR6 98 aa7.11□□□□□ -1.27
PRPF40B-211ENST00000551063 H3BPC8 53 aa7.1□□□□□ -1.27
PRPF40B-211ENST00000551063 TRAV7A0A075B6U4 112 aa7.09□□□□□ -1.27
PRPF40B-211ENST00000551063 KLKP1Q107X0 134 aa7.08□□□□□ -1.28
PRPF40B-211ENST00000551063 KRTAP19-6Q3LI70 58 aa7.08□□□□□ -1.28
PRPF40B-211ENST00000551063 MACF1Q9UPN3 7388 aaKnown RBP7.05□□□□□ -1.28
PRPF40B-211ENST00000551063 SERP2Q8N6R1 65 aa7.05□□□□□ -1.28
PRPF40B-211ENST00000551063 NDUFC1O43677 76 aa7.02□□□□□ -1.29
PRPF40B-211ENST00000551063 ANAPC13Q9BS18 74 aa7.01□□□□□ -1.29
PRPF40B-211ENST00000551063 COX7CP15954 63 aa6.98□□□□□ -1.29
PRPF40B-211ENST00000551063 SPRR2GQ9BYE4 73 aa6.97□□□□□ -1.29
PRPF40B-211ENST00000551063 H0YAA0 97 aa6.96□□□□□ -1.3
PRPF40B-211ENST00000551063 DMAC1Q96GE9 116 aa6.94□□□□□ -1.3
PRPF40B-211ENST00000551063 CRIPTQ9P021 101 aa6.94□□□□□ -1.3
PRPF40B-211ENST00000551063 SYNE2Q8WXH0 6885 aaKnown RBP6.93□□□□□ -1.3
PRPF40B-211ENST00000551063 C20orf197Q8N268 126 aa6.93□□□□□ -1.3
PRPF40B-211ENST00000551063 KRTAP19-8Q3LI54 63 aa6.9□□□□□ -1.3
PRPF40B-211ENST00000551063 Q5VV11 94 aa6.89□□□□□ -1.31
PRPF40B-211ENST00000551063 SNURFQ9Y675 71 aa6.89□□□□□ -1.31
PRPF40B-211ENST00000551063 MT1BP07438 61 aa6.87□□□□□ -1.31
PRPF40B-211ENST00000551063 KRTAP6-3Q3LI67 103 aa6.87□□□□□ -1.31
PRPF40B-211ENST00000551063 CCDC179H3BU77 68 aa6.84□□□□□ -1.31
PRPF40B-211ENST00000551063 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
PRPF40B-211ENST00000551063 CYSTM1Q9H1C7 97 aa6.79□□□□□ -1.32
PRPF40B-211ENST00000551063 ACYP2P14621 99 aa6.78□□□□□ -1.32
PRPF40B-211ENST00000551063 H7BZZ5 65 aa6.76□□□□□ -1.33
PRPF40B-211ENST00000551063 PCP4P48539 62 aa6.75□□□□□ -1.33
PRPF40B-211ENST00000551063 A6NN06 94 aa6.74□□□□□ -1.33
PRPF40B-211ENST00000551063 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
PRPF40B-211ENST00000551063 P0C880 135 aa6.7□□□□□ -1.34
PRPF40B-211ENST00000551063 KRTAP10-5P60370 271 aa6.69□□□□□ -1.34
PRPF40B-211ENST00000551063 SPTSSBQ8NFR3 76 aa6.69□□□□□ -1.34
PRPF40B-211ENST00000551063 KRTAP3-2Q9BYR7 98 aa6.67□□□□□ -1.34
PRPF40B-211ENST00000551063 R4GN34 69 aa6.67□□□□□ -1.34
PRPF40B-211ENST00000551063 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
PRPF40B-211ENST00000551063 TMEM258P61165 79 aa6.63□□□□□ -1.35
PRPF40B-211ENST00000551063 M0QZ58 72 aa6.62□□□□□ -1.35
PRPF40B-211ENST00000551063 ATP5EP56381 51 aaPredicted RBP6.62□□□□□ -1.35
PRPF40B-211ENST00000551063 PLAC4Q8WY50 150 aa6.56□□□□□ -1.36
PRPF40B-211ENST00000551063 NEBP20929 6669 aa6.56□□□□□ -1.36
PRPF40B-211ENST00000551063 COA5Q86WW8 74 aa6.52□□□□□ -1.37
PRPF40B-211ENST00000551063 PRO2289Q9P1D8 64 aa6.52□□□□□ -1.37
PRPF40B-211ENST00000551063 MUC12Q9UKN1 5478 aa6.52□□□□□ -1.37
PRPF40B-211ENST00000551063 LINC01554Q52M75 96 aa6.49□□□□□ -1.37
PRPF40B-211ENST00000551063 MT1XP80297 61 aa6.48□□□□□ -1.37
PRPF40B-211ENST00000551063 KRTAP5-9P26371 169 aa6.46□□□□□ -1.38
PRPF40B-211ENST00000551063 KRTAP20-1Q3LI63 56 aa6.45□□□□□ -1.38
PRPF40B-211ENST00000551063 SERP1Q9Y6X1 66 aa6.41□□□□□ -1.38
PRPF40B-211ENST00000551063 KMT2DO14686 5537 aa6.35□□□□□ -1.39
PRPF40B-211ENST00000551063 KRTAP12-2P59991 146 aa6.33□□□□□ -1.4
PRPF40B-211ENST00000551063 SEC61GP60059 68 aa6.32□□□□□ -1.4
PRPF40B-211ENST00000551063 KRTAP13-4Q3LI77 160 aa6.31□□□□□ -1.4
PRPF40B-211ENST00000551063 MDN1Q9NU22 5596 aa6.31□□□□□ -1.4
PRPF40B-211ENST00000551063 RPS28P62857 69 aaKnown RBP6.28□□□□□ -1.4
PRPF40B-211ENST00000551063 KRTAP2-3P0C7H8 128 aa6.25□□□□□ -1.41
PRPF40B-211ENST00000551063 KRTAP2-4Q9BYR9 128 aa6.25□□□□□ -1.41
PRPF40B-211ENST00000551063 SPRR2FQ96RM1 72 aa6.23□□□□□ -1.41
PRPF40B-211ENST00000551063 SMIM26A0A096LP01 95 aa6.21□□□□□ -1.42
PRPF40B-211ENST00000551063 LINC01558Q9Y6Z2 57 aa6.2□□□□□ -1.42
PRPF40B-211ENST00000551063 KRTAP8-1Q8IUC2 63 aa6.19□□□□□ -1.42
PRPF40B-211ENST00000551063 A0A1B0GU33 70 aa6.18□□□□□ -1.42
PRPF40B-211ENST00000551063 SPRR2EP22531 72 aa6.18□□□□□ -1.42
PRPF40B-211ENST00000551063 SPRR2BP35325 72 aa6.18□□□□□ -1.42
PRPF40B-211ENST00000551063 SPRR2AP35326 72 aa6.18□□□□□ -1.42
PRPF40B-211ENST00000551063 A0A1B0GU69 56 aa6.17□□□□□ -1.42
PRPF40B-211ENST00000551063 KRTAP10-7P60409 375 aaPredicted RBP6.17□□□□□ -1.42
PRPF40B-211ENST00000551063 KRTAP10-12P60413 245 aa6.17□□□□□ -1.42
PRPF40B-211ENST00000551063 CAMK2N1Q7Z7J9 78 aa6.15□□□□□ -1.42
PRPF40B-211ENST00000551063 V9GYY9 64 aa6.15□□□□□ -1.42
PRPF40B-211ENST00000551063 Q1T7F1 81 aa6.14□□□□□ -1.43
PRPF40B-211ENST00000551063 SPATA8Q6RVD6 105 aa6.13□□□□□ -1.43
PRPF40B-211ENST00000551063 PRR15LQ9BU68 103 aa6.13□□□□□ -1.43
PRPF40B-211ENST00000551063 A0A0D9SG42 100 aa6.12□□□□□ -1.43
PRPF40B-211ENST00000551063 KRTAP4-8A0A0G2JLE6 195 aa6.12□□□□□ -1.43
PRPF40B-211ENST00000551063 KRTAP4-8Q9BYQ9 185 aa6.12□□□□□ -1.43
PRPF40B-211ENST00000551063 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
PRPF40B-211ENST00000551063 KRTAP2-2Q9BYT5 123 aa6.05□□□□□ -1.44
PRPF40B-211ENST00000551063 KRTAP2-1Q9BYU5 128 aa6.05□□□□□ -1.44
PRPF40B-211ENST00000551063 SPINT4Q6UDR6 99 aa6.04□□□□□ -1.44
PRPF40B-211ENST00000551063 PSPHP1O15172 72 aa6.02□□□□□ -1.45
PRPF40B-211ENST00000551063 KRTAP12-1P59990 96 aa6.02□□□□□ -1.45
PRPF40B-211ENST00000551063 SPRR2DP22532 72 aa5.99□□□□□ -1.45
PRPF40B-211ENST00000551063 A8MU10 97 aa5.94□□□□□ -1.46
PRPF40B-211ENST00000551063 UQCR11O14957 56 aa5.94□□□□□ -1.46
PRPF40B-211ENST00000551063 A6NED7 52 aa5.86□□□□□ -1.47
PRPF40B-211ENST00000551063 MIR22HGQ0VDD5 57 aa5.85□□□□□ -1.47
PRPF40B-211ENST00000551063 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
PRPF40B-211ENST00000551063 KRTAP19-7Q3SYF9 63 aa5.79□□□□□ -1.48
PRPF40B-211ENST00000551063 MT1EP04732 61 aa5.75□□□□□ -1.49
PRPF40B-211ENST00000551063 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
PRPF40B-211ENST00000551063 CDC42SE1Q9NRR8 79 aa5.73□□□□□ -1.49
PRPF40B-211ENST00000551063 TNP1P09430 55 aa5.72□□□□□ -1.49
PRPF40B-211ENST00000551063 KRTAP19-5Q3LI72 72 aa5.67□□□□□ -1.5
PRPF40B-211ENST00000551063 KRTAP19-3Q7Z4W3 81 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms