RNA–Protein interactions for RNA: ENST00000550716.1

ATP2B1-207, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2B1, Length 486 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-207ENST00000550716 TMEM254Q8TBM7 123 aa4.5□□□□□ -1.69
ATP2B1-207ENST00000550716 LINC00313P59037 77 aa4.48□□□□□ -1.69
ATP2B1-207ENST00000550716 MRPL34Q9BQ48 92 aaKnown RBP4.48□□□□□ -1.69
ATP2B1-207ENST00000550716 OCR1Q9BZK8 76 aa4.48□□□□□ -1.69
ATP2B1-207ENST00000550716 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.47□□□□□ -1.69
ATP2B1-207ENST00000550716 Q75L30 129 aa4.46□□□□□ -1.7
ATP2B1-207ENST00000550716 SMIM20Q8N5G0 67 aa4.46□□□□□ -1.7
ATP2B1-207ENST00000550716 ANAPC13Q9BS18 74 aa4.46□□□□□ -1.7
ATP2B1-207ENST00000550716 TRAV7A0A075B6U4 112 aa4.45□□□□□ -1.7
ATP2B1-207ENST00000550716 SERP2Q8N6R1 65 aa4.45□□□□□ -1.7
ATP2B1-207ENST00000550716 COX7CP15954 63 aa4.43□□□□□ -1.7
ATP2B1-207ENST00000550716 ATP11AUNQ6ZP68 121 aa4.43□□□□□ -1.7
ATP2B1-207ENST00000550716 MT2AP02795 61 aa4.42□□□□□ -1.7
ATP2B1-207ENST00000550716 A8MUU9 505 aa4.41□□□□□ -1.7
ATP2B1-207ENST00000550716 C20orf166-AS1Q96NR2 134 aa4.41□□□□□ -1.7
ATP2B1-207ENST00000550716 TP53AIP1Q9HCN2 124 aa4.41□□□□□ -1.7
ATP2B1-207ENST00000550716 UQCRQO14949 82 aa4.4□□□□□ -1.71
ATP2B1-207ENST00000550716 CCDC179H3BU77 68 aa4.39□□□□□ -1.71
ATP2B1-207ENST00000550716 NDUFS5O43920 106 aa4.39□□□□□ -1.71
ATP2B1-207ENST00000550716 MT1FP04733 61 aa4.39□□□□□ -1.71
ATP2B1-207ENST00000550716 MACF1Q9UPN3 7388 aaKnown RBP4.38□□□□□ -1.71
ATP2B1-207ENST00000550716 TRAV22A0A0B4J277 110 aa4.38□□□□□ -1.71
ATP2B1-207ENST00000550716 C5orf47Q569G3 176 aa4.38□□□□□ -1.71
ATP2B1-207ENST00000550716 SYNE2Q8WXH0 6885 aaKnown RBP4.37□□□□□ -1.71
ATP2B1-207ENST00000550716 Q5W150 140 aa4.37□□□□□ -1.71
ATP2B1-207ENST00000550716 H0Y9P7 68 aa4.36□□□□□ -1.71
ATP2B1-207ENST00000550716 KLKP1Q107X0 134 aa4.36□□□□□ -1.71
ATP2B1-207ENST00000550716 ZCCHC13Q8WW36 166 aaKnown RBP4.36□□□□□ -1.71
ATP2B1-207ENST00000550716 KRTAP10-5P60370 271 aa4.35□□□□□ -1.71
ATP2B1-207ENST00000550716 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
ATP2B1-207ENST00000550716 C20orf197Q8N268 126 aa4.35□□□□□ -1.71
ATP2B1-207ENST00000550716 CYSTM1Q9H1C7 97 aa4.35□□□□□ -1.71
ATP2B1-207ENST00000550716 H3BPC8 53 aa4.34□□□□□ -1.71
ATP2B1-207ENST00000550716 MP68P56378 58 aa4.33□□□□□ -1.72
ATP2B1-207ENST00000550716 SNURFQ9Y675 71 aa4.33□□□□□ -1.72
ATP2B1-207ENST00000550716 HRES1P13985 223 aa4.32□□□□□ -1.72
ATP2B1-207ENST00000550716 LINC00208Q96KT6 92 aa4.32□□□□□ -1.72
ATP2B1-207ENST00000550716 FAM236DA0A1B0GTK5 79 aa4.3□□□□□ -1.72
ATP2B1-207ENST00000550716 LOC101927531A0A1B0GV80 90 aa4.3□□□□□ -1.72
ATP2B1-207ENST00000550716 FAM236CP0DP71 79 aa4.3□□□□□ -1.72
ATP2B1-207ENST00000550716 KRTAP10-10P60014 251 aa4.3□□□□□ -1.72
ATP2B1-207ENST00000550716 C1orf64Q8NEQ6 169 aa4.3□□□□□ -1.72
ATP2B1-207ENST00000550716 H7BZZ5 65 aa4.29□□□□□ -1.72
ATP2B1-207ENST00000550716 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
ATP2B1-207ENST00000550716 NDUFC1O43677 76 aa4.27□□□□□ -1.73
ATP2B1-207ENST00000550716 CYP4F30PQ9H0H9 118 aa4.27□□□□□ -1.73
ATP2B1-207ENST00000550716 C7orf65Q6ZTY9 151 aa4.26□□□□□ -1.73
ATP2B1-207ENST00000550716 TMEM258P61165 79 aa4.23□□□□□ -1.73
ATP2B1-207ENST00000550716 KRTAP19-6Q3LI70 58 aa4.23□□□□□ -1.73
ATP2B1-207ENST00000550716 RBM12B-AS1Q9P1G2 102 aa4.23□□□□□ -1.73
ATP2B1-207ENST00000550716 SPINK7P58062 85 aa4.22□□□□□ -1.73
ATP2B1-207ENST00000550716 SPANXA2-OT1Q8N9U9 137 aa4.21□□□□□ -1.74
ATP2B1-207ENST00000550716 ATP5EP56381 51 aaPredicted RBP4.18□□□□□ -1.74
ATP2B1-207ENST00000550716 NEBP20929 6669 aa4.15□□□□□ -1.74
ATP2B1-207ENST00000550716 DMAC1Q96GE9 116 aa4.15□□□□□ -1.75
ATP2B1-207ENST00000550716 C4orf26Q17RF5 130 aa4.14□□□□□ -1.75
ATP2B1-207ENST00000550716 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
ATP2B1-207ENST00000550716 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
ATP2B1-207ENST00000550716 KRTAP6-3Q3LI67 103 aa4.13□□□□□ -1.75
ATP2B1-207ENST00000550716 PRAC1Q96KF2 57 aa4.12□□□□□ -1.75
ATP2B1-207ENST00000550716 A8MUN3 132 aa4.11□□□□□ -1.75
ATP2B1-207ENST00000550716 LCE3CQ5T5A8 94 aa4.11□□□□□ -1.75
ATP2B1-207ENST00000550716 ACYP2P14621 99 aa4.08□□□□□ -1.76
ATP2B1-207ENST00000550716 SERP1Q9Y6X1 66 aa4.08□□□□□ -1.76
ATP2B1-207ENST00000550716 COA5Q86WW8 74 aa4.07□□□□□ -1.76
ATP2B1-207ENST00000550716 KRTAP9-6A8MVA2 160 aa4.06□□□□□ -1.76
ATP2B1-207ENST00000550716 RPS28P62857 69 aaKnown RBP4.06□□□□□ -1.76
ATP2B1-207ENST00000550716 H1FX-AS1Q4G0G2 97 aa4.02□□□□□ -1.77
ATP2B1-207ENST00000550716 MDN1Q9NU22 5596 aa4.01□□□□□ -1.77
ATP2B1-207ENST00000550716 LCA10Q71F78 164 aa3.99□□□□□ -1.77
ATP2B1-207ENST00000550716 S4R3F8 94 aa3.99□□□□□ -1.77
ATP2B1-207ENST00000550716 KMT2DO14686 5537 aa3.99□□□□□ -1.77
ATP2B1-207ENST00000550716 CHKB-CPT1BH3BT56 60 aa3.98□□□□□ -1.77
ATP2B1-207ENST00000550716 MT1BP07438 61 aa3.98□□□□□ -1.77
ATP2B1-207ENST00000550716 SMIM26A0A096LP01 95 aa3.96□□□□□ -1.78
ATP2B1-207ENST00000550716 A6NN06 94 aa3.94□□□□□ -1.78
ATP2B1-207ENST00000550716 SPTSSBQ8NFR3 76 aa3.93□□□□□ -1.78
ATP2B1-207ENST00000550716 Q1T7F1 81 aa3.92□□□□□ -1.78
ATP2B1-207ENST00000550716 KRTAP20-1Q3LI63 56 aa3.92□□□□□ -1.78
ATP2B1-207ENST00000550716 KRTAP5-1Q6L8H4 278 aa3.92□□□□□ -1.78
ATP2B1-207ENST00000550716 LINC01558Q9Y6Z2 57 aa3.91□□□□□ -1.78
ATP2B1-207ENST00000550716 KRTAP19-8Q3LI54 63 aa3.9□□□□□ -1.79
ATP2B1-207ENST00000550716 Q5VV11 94 aa3.89□□□□□ -1.79
ATP2B1-207ENST00000550716 CSAG1Q6PB30 78 aa3.88□□□□□ -1.79
ATP2B1-207ENST00000550716 SPRR2GQ9BYE4 73 aa3.88□□□□□ -1.79
ATP2B1-207ENST00000550716 V9GYY9 64 aa3.88□□□□□ -1.79
ATP2B1-207ENST00000550716 KRTAP5-9P26371 169 aa3.87□□□□□ -1.79
ATP2B1-207ENST00000550716 H0YAA0 97 aa3.85□□□□□ -1.79
ATP2B1-207ENST00000550716 A0A1B0GU69 56 aa3.83□□□□□ -1.8
ATP2B1-207ENST00000550716 PRR15LQ9BU68 103 aa3.83□□□□□ -1.8
ATP2B1-207ENST00000550716 PSPHP1O15172 72 aa3.81□□□□□ -1.8
ATP2B1-207ENST00000550716 SEC61GP60059 68 aa3.79□□□□□ -1.8
ATP2B1-207ENST00000550716 ADM2Q7Z4H4 148 aa3.79□□□□□ -1.8
ATP2B1-207ENST00000550716 P0C880 135 aa3.78□□□□□ -1.8
ATP2B1-207ENST00000550716 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
ATP2B1-207ENST00000550716 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
ATP2B1-207ENST00000550716 KRTAP4-4Q9BYR3 166 aa3.74□□□□□ -1.81
ATP2B1-207ENST00000550716 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
ATP2B1-207ENST00000550716 A0A1B0GU33 70 aa3.72□□□□□ -1.81
ATP2B1-207ENST00000550716 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms