RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 KRTAP13-3Q3SY46 172 aa3.34□□□□□ -1.87
DEPDC4-209ENST00000550587 ANAPC13Q9BS18 74 aa3.34□□□□□ -1.87
DEPDC4-209ENST00000550587 UQCRQO14949 82 aa3.33□□□□□ -1.88
DEPDC4-209ENST00000550587 C5orf47Q569G3 176 aa3.33□□□□□ -1.88
DEPDC4-209ENST00000550587 C20orf166-AS1Q96NR2 134 aa3.33□□□□□ -1.88
DEPDC4-209ENST00000550587 A8MUU9 505 aa3.32□□□□□ -1.88
DEPDC4-209ENST00000550587 NDUFS5O43920 106 aa3.32□□□□□ -1.88
DEPDC4-209ENST00000550587 COX7CP15954 63 aa3.32□□□□□ -1.88
DEPDC4-209ENST00000550587 Q75L30 129 aa3.31□□□□□ -1.88
DEPDC4-209ENST00000550587 TRAV22A0A0B4J277 110 aa3.29□□□□□ -1.88
DEPDC4-209ENST00000550587 H3BPC8 53 aa3.29□□□□□ -1.88
DEPDC4-209ENST00000550587 MP68P56378 58 aa3.29□□□□□ -1.88
DEPDC4-209ENST00000550587 Q5W150 140 aa3.29□□□□□ -1.88
DEPDC4-209ENST00000550587 H0Y9P7 68 aa3.28□□□□□ -1.88
DEPDC4-209ENST00000550587 ZCCHC13Q8WW36 166 aaKnown RBP3.28□□□□□ -1.88
DEPDC4-209ENST00000550587 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
DEPDC4-209ENST00000550587 CCDC179H3BU77 68 aa3.27□□□□□ -1.89
DEPDC4-209ENST00000550587 RPL37P61927 97 aaKnown RBP3.27□□□□□ -1.89
DEPDC4-209ENST00000550587 C20orf197Q8N268 126 aa3.27□□□□□ -1.89
DEPDC4-209ENST00000550587 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
DEPDC4-209ENST00000550587 KLKP1Q107X0 134 aa3.26□□□□□ -1.89
DEPDC4-209ENST00000550587 ATP11AUNQ6ZP68 121 aa3.26□□□□□ -1.89
DEPDC4-209ENST00000550587 C1orf64Q8NEQ6 169 aa3.26□□□□□ -1.89
DEPDC4-209ENST00000550587 LINC00208Q96KT6 92 aa3.26□□□□□ -1.89
DEPDC4-209ENST00000550587 LOC101927531A0A1B0GV80 90 aa3.24□□□□□ -1.89
DEPDC4-209ENST00000550587 M0R2T5 61 aa3.24□□□□□ -1.89
DEPDC4-209ENST00000550587 CYP4F30PQ9H0H9 118 aa3.24□□□□□ -1.89
DEPDC4-209ENST00000550587 SNURFQ9Y675 71 aa3.24□□□□□ -1.89
DEPDC4-209ENST00000550587 NDUFC1O43677 76 aa3.23□□□□□ -1.89
DEPDC4-209ENST00000550587 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
DEPDC4-209ENST00000550587 KRTAP4-1Q9BYQ7 146 aa3.23□□□□□ -1.89
DEPDC4-209ENST00000550587 PCOTHQ58A44 107 aa3.22□□□□□ -1.89
DEPDC4-209ENST00000550587 COX6B2Q6YFQ2 88 aa3.22□□□□□ -1.89
DEPDC4-209ENST00000550587 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
DEPDC4-209ENST00000550587 CYSTM1Q9H1C7 97 aa3.21□□□□□ -1.9
DEPDC4-209ENST00000550587 H7BZZ5 65 aa3.2□□□□□ -1.9
DEPDC4-209ENST00000550587 SPINK7P58062 85 aa3.2□□□□□ -1.9
DEPDC4-209ENST00000550587 C7orf65Q6ZTY9 151 aa3.2□□□□□ -1.9
DEPDC4-209ENST00000550587 MUC17Q685J3 4493 aa3.2□□□□□ -1.9
DEPDC4-209ENST00000550587 MT1HP80294 61 aa3.19□□□□□ -1.9
DEPDC4-209ENST00000550587 SPANXA2-OT1Q8N9U9 137 aa3.17□□□□□ -1.9
DEPDC4-209ENST00000550587 HRES1P13985 223 aa3.16□□□□□ -1.9
DEPDC4-209ENST00000550587 TMEM258P61165 79 aa3.16□□□□□ -1.9
DEPDC4-209ENST00000550587 SYNE2Q8WXH0 6885 aaKnown RBP3.14□□□□□ -1.91
DEPDC4-209ENST00000550587 ATP5EP56381 51 aaPredicted RBP3.14□□□□□ -1.91
DEPDC4-209ENST00000550587 KRTAP19-2Q3LHN2 52 aa3.14□□□□□ -1.91
DEPDC4-209ENST00000550587 C4orf26Q17RF5 130 aa3.13□□□□□ -1.91
DEPDC4-209ENST00000550587 FAM236DA0A1B0GTK5 79 aa3.12□□□□□ -1.91
DEPDC4-209ENST00000550587 FAM236CP0DP71 79 aa3.12□□□□□ -1.91
DEPDC4-209ENST00000550587 SSPOA2VEC9 5147 aa3.11□□□□□ -1.91
DEPDC4-209ENST00000550587 A8MUN3 132 aa3.11□□□□□ -1.91
DEPDC4-209ENST00000550587 DMAC1Q96GE9 116 aa3.11□□□□□ -1.91
DEPDC4-209ENST00000550587 ACYP2P14621 99 aa3.1□□□□□ -1.91
DEPDC4-209ENST00000550587 RBM12B-AS1Q9P1G2 102 aa3.1□□□□□ -1.91
DEPDC4-209ENST00000550587 MACF1Q9UPN3 7388 aaKnown RBP3.09□□□□□ -1.91
DEPDC4-209ENST00000550587 RPS28P62857 69 aaKnown RBP3.07□□□□□ -1.92
DEPDC4-209ENST00000550587 SERP1Q9Y6X1 66 aa3.07□□□□□ -1.92
DEPDC4-209ENST00000550587 H1FX-AS1Q4G0G2 97 aa3.06□□□□□ -1.92
DEPDC4-209ENST00000550587 LCE3CQ5T5A8 94 aa3.05□□□□□ -1.92
DEPDC4-209ENST00000550587 COA5Q86WW8 74 aa3.05□□□□□ -1.92
DEPDC4-209ENST00000550587 FLGP20930 4061 aaPredicted RBP3.04□□□□□ -1.92
DEPDC4-209ENST00000550587 OBSCNQ5VST9 7968 aa3.03□□□□□ -1.92
DEPDC4-209ENST00000550587 CHKB-CPT1BH3BT56 60 aa3.02□□□□□ -1.93
DEPDC4-209ENST00000550587 NEBP20929 6669 aa3.02□□□□□ -1.93
DEPDC4-209ENST00000550587 FCGBPQ9Y6R7 5405 aaPredicted RBP3.02□□□□□ -1.93
DEPDC4-209ENST00000550587 KRTAP4-3Q9BYR4 195 aa3.01□□□□□ -1.93
DEPDC4-209ENST00000550587 S4R3F8 94 aa3.01□□□□□ -1.93
DEPDC4-209ENST00000550587 USH2AO75445 5202 aa3.01□□□□□ -1.93
DEPDC4-209ENST00000550587 LCA10Q71F78 164 aa3□□□□□ -1.93
DEPDC4-209ENST00000550587 SPTSSBQ8NFR3 76 aa3□□□□□ -1.93
DEPDC4-209ENST00000550587 SMIM26A0A096LP01 95 aa2.99□□□□□ -1.93
DEPDC4-209ENST00000550587 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
DEPDC4-209ENST00000550587 CSAG1Q6PB30 78 aa2.98□□□□□ -1.93
DEPDC4-209ENST00000550587 KRTAP10-10P60014 251 aa2.97□□□□□ -1.93
DEPDC4-209ENST00000550587 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
DEPDC4-209ENST00000550587 Q1T7F1 81 aa2.95□□□□□ -1.94
DEPDC4-209ENST00000550587 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
DEPDC4-209ENST00000550587 V9GYY9 64 aa2.95□□□□□ -1.94
DEPDC4-209ENST00000550587 MT2AP02795 61 aa2.93□□□□□ -1.94
DEPDC4-209ENST00000550587 LINC01558Q9Y6Z2 57 aa2.93□□□□□ -1.94
DEPDC4-209ENST00000550587 H0YAA0 97 aa2.91□□□□□ -1.94
DEPDC4-209ENST00000550587 SEC61GP60059 68 aa2.91□□□□□ -1.94
DEPDC4-209ENST00000550587 MT1FP04733 61 aa2.9□□□□□ -1.95
DEPDC4-209ENST00000550587 A0A1B0GU69 56 aa2.89□□□□□ -1.95
DEPDC4-209ENST00000550587 PRR15LQ9BU68 103 aa2.89□□□□□ -1.95
DEPDC4-209ENST00000550587 PSPHP1O15172 72 aa2.87□□□□□ -1.95
DEPDC4-209ENST00000550587 ADM2Q7Z4H4 148 aa2.86□□□□□ -1.95
DEPDC4-209ENST00000550587 KRTAP19-6Q3LI70 58 aa2.85□□□□□ -1.95
DEPDC4-209ENST00000550587 P0C880 135 aa2.84□□□□□ -1.95
DEPDC4-209ENST00000550587 Q5VV11 94 aa2.84□□□□□ -1.95
DEPDC4-209ENST00000550587 A0A1B0GU33 70 aa2.83□□□□□ -1.96
DEPDC4-209ENST00000550587 GPR98Q8WXG9 6306 aa2.81□□□□□ -1.96
DEPDC4-209ENST00000550587 UQCR11O14957 56 aa2.81□□□□□ -1.96
DEPDC4-209ENST00000550587 CRIPTQ9P021 101 aa2.81□□□□□ -1.96
DEPDC4-209ENST00000550587 M0QZ58 72 aa2.8□□□□□ -1.96
DEPDC4-209ENST00000550587 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
DEPDC4-209ENST00000550587 A6NED7 52 aa2.78□□□□□ -1.96
DEPDC4-209ENST00000550587 SPATA8Q6RVD6 105 aa2.78□□□□□ -1.96
DEPDC4-209ENST00000550587 R4GN34 69 aa2.78□□□□□ -1.96
DEPDC4-209ENST00000550587 KRTAP2-3P0C7H8 128 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms