RNA–Protein interactions for RNA: ENST00000547323.1

GPN3-205, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-205ENST00000547323 KRTAP10-10P60014 251 aa9.86□□□□□ -0.83
GPN3-205ENST00000547323 A8MUN3 132 aa9.85□□□□□ -0.83
GPN3-205ENST00000547323 CSAG1Q6PB30 78 aa9.84□□□□□ -0.83
GPN3-205ENST00000547323 C20orf197Q8N268 126 aa9.83□□□□□ -0.84
GPN3-205ENST00000547323 CRCT1Q9UGL9 99 aa9.8□□□□□ -0.84
GPN3-205ENST00000547323 DMAC1Q96GE9 116 aa9.78□□□□□ -0.84
GPN3-205ENST00000547323 KRTAP9-3Q9BYQ3 159 aa9.75□□□□□ -0.85
GPN3-205ENST00000547323 COX7CP15954 63 aa9.73□□□□□ -0.85
GPN3-205ENST00000547323 NDUFC1O43677 76 aa9.72□□□□□ -0.85
GPN3-205ENST00000547323 ANAPC13Q9BS18 74 aa9.64□□□□□ -0.87
GPN3-205ENST00000547323 ACYP2P14621 99 aa9.62□□□□□ -0.87
GPN3-205ENST00000547323 LCE2BO14633 110 aa9.61□□□□□ -0.87
GPN3-205ENST00000547323 SPANXA2-OT1Q8N9U9 137 aa9.6□□□□□ -0.87
GPN3-205ENST00000547323 CYSTM1Q9H1C7 97 aa9.59□□□□□ -0.87
GPN3-205ENST00000547323 H7BZZ5 65 aa9.5□□□□□ -0.89
GPN3-205ENST00000547323 CCDC179H3BU77 68 aa9.49□□□□□ -0.89
GPN3-205ENST00000547323 H0YAA0 97 aa9.48□□□□□ -0.89
GPN3-205ENST00000547323 ADM2Q7Z4H4 148 aa9.47□□□□□ -0.89
GPN3-205ENST00000547323 KRTAP19-1Q8IUB9 90 aa9.45□□□□□ -0.9
GPN3-205ENST00000547323 USH2AO75445 5202 aa9.44□□□□□ -0.9
GPN3-205ENST00000547323 CHKB-CPT1BH3BT56 60 aa9.44□□□□□ -0.9
GPN3-205ENST00000547323 SPTSSBQ8NFR3 76 aa9.37□□□□□ -0.91
GPN3-205ENST00000547323 SPRR2GQ9BYE4 73 aa9.37□□□□□ -0.91
GPN3-205ENST00000547323 COA5Q86WW8 74 aa9.35□□□□□ -0.91
GPN3-205ENST00000547323 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
GPN3-205ENST00000547323 P0C880 135 aa9.34□□□□□ -0.91
GPN3-205ENST00000547323 CRIPTQ9P021 101 aa9.33□□□□□ -0.92
GPN3-205ENST00000547323 SSPOA2VEC9 5147 aa9.26□□□□□ -0.93
GPN3-205ENST00000547323 KRTAP19-8Q3LI54 63 aa9.25□□□□□ -0.93
GPN3-205ENST00000547323 MT1BP07438 61 aa9.22□□□□□ -0.93
GPN3-205ENST00000547323 Q5VV11 94 aa9.19□□□□□ -0.94
GPN3-205ENST00000547323 KRTAP19-6Q3LI70 58 aa9.14□□□□□ -0.95
GPN3-205ENST00000547323 R4GN34 69 aa9.14□□□□□ -0.95
GPN3-205ENST00000547323 M0QZ58 72 aa9.12□□□□□ -0.95
GPN3-205ENST00000547323 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.11□□□□□ -0.95
GPN3-205ENST00000547323 ATP5EP56381 51 aaPredicted RBP9.1□□□□□ -0.95
GPN3-205ENST00000547323 FCGBPQ9Y6R7 5405 aaPredicted RBP9.06□□□□□ -0.96
GPN3-205ENST00000547323 TMEM258P61165 79 aa9.06□□□□□ -0.96
GPN3-205ENST00000547323 KRTAP9-7A8MTY7 169 aa9.04□□□□□ -0.96
GPN3-205ENST00000547323 LINC01554Q52M75 96 aa8.99□□□□□ -0.97
GPN3-205ENST00000547323 SEC61GP60059 68 aa8.95□□□□□ -0.98
GPN3-205ENST00000547323 SERP1Q9Y6X1 66 aa8.94□□□□□ -0.98
GPN3-205ENST00000547323 KRTAP13-4Q3LI77 160 aa8.93□□□□□ -0.98
GPN3-205ENST00000547323 MACF1Q9UPN3 7388 aaKnown RBP8.89□□□□□ -0.99
GPN3-205ENST00000547323 A6NN06 94 aa8.89□□□□□ -0.99
GPN3-205ENST00000547323 PLAC4Q8WY50 150 aa8.89□□□□□ -0.99
GPN3-205ENST00000547323 KRTAP10-5P60370 271 aa8.88□□□□□ -0.99
GPN3-205ENST00000547323 PCP4P48539 62 aa8.85□□□□□ -0.99
GPN3-205ENST00000547323 SYNE2Q8WXH0 6885 aaKnown RBP8.83□□□□□ -1
GPN3-205ENST00000547323 A0A1B0GU69 56 aa8.83□□□□□ -1
GPN3-205ENST00000547323 A0A1B0GU33 70 aa8.81□□□□□ -1
GPN3-205ENST00000547323 SPATA8Q6RVD6 105 aa8.77□□□□□ -1.01
GPN3-205ENST00000547323 MT1XP80297 61 aa8.75□□□□□ -1.01
GPN3-205ENST00000547323 LINC01558Q9Y6Z2 57 aa8.74□□□□□ -1.01
GPN3-205ENST00000547323 A0A0D9SG42 100 aa8.69□□□□□ -1.02
GPN3-205ENST00000547323 PRR15LQ9BU68 103 aa8.66□□□□□ -1.02
GPN3-205ENST00000547323 PRO2289Q9P1D8 64 aa8.66□□□□□ -1.02
GPN3-205ENST00000547323 A8MU10 97 aa8.55□□□□□ -1.04
GPN3-205ENST00000547323 SMIM26A0A096LP01 95 aa8.52□□□□□ -1.05
GPN3-205ENST00000547323 KRTAP12-1P59990 96 aa8.51□□□□□ -1.05
GPN3-205ENST00000547323 SPINT4Q6UDR6 99 aa8.51□□□□□ -1.05
GPN3-205ENST00000547323 KRTAP6-3Q3LI67 103 aa8.5□□□□□ -1.05
GPN3-205ENST00000547323 Q1T7F1 81 aa8.48□□□□□ -1.05
GPN3-205ENST00000547323 CAMK2N1Q7Z7J9 78 aa8.48□□□□□ -1.05
GPN3-205ENST00000547323 KRTAP12-2P59991 146 aa8.47□□□□□ -1.05
GPN3-205ENST00000547323 V9GYY9 64 aa8.46□□□□□ -1.06
GPN3-205ENST00000547323 RPS28P62857 69 aaKnown RBP8.44□□□□□ -1.06
GPN3-205ENST00000547323 PSPHP1O15172 72 aa8.43□□□□□ -1.06
GPN3-205ENST00000547323 UQCR11O14957 56 aa8.41□□□□□ -1.06
GPN3-205ENST00000547323 KRTAP10-7P60409 375 aaPredicted RBP8.38□□□□□ -1.07
GPN3-205ENST00000547323 KRTAP10-12P60413 245 aa8.29□□□□□ -1.08
GPN3-205ENST00000547323 MIR22HGQ0VDD5 57 aa8.29□□□□□ -1.08
GPN3-205ENST00000547323 NEBP20929 6669 aa8.28□□□□□ -1.08
GPN3-205ENST00000547323 KRTAP4-8A0A0G2JLE6 195 aa8.27□□□□□ -1.09
GPN3-205ENST00000547323 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
GPN3-205ENST00000547323 KMT2DO14686 5537 aa8.24□□□□□ -1.09
GPN3-205ENST00000547323 KRTAP5-9P26371 169 aa8.18□□□□□ -1.1
GPN3-205ENST00000547323 KRTAP8-1Q8IUC2 63 aa8.18□□□□□ -1.1
GPN3-205ENST00000547323 MUC12Q9UKN1 5478 aa8.17□□□□□ -1.1
GPN3-205ENST00000547323 A6NED7 52 aa8.13□□□□□ -1.11
GPN3-205ENST00000547323 C10orf95Q9H7T3 257 aa8.12□□□□□ -1.11
GPN3-205ENST00000547323 SPRR2FQ96RM1 72 aa8.08□□□□□ -1.12
GPN3-205ENST00000547323 K7ERS5 55 aa7.98□□□□□ -1.13
GPN3-205ENST00000547323 TNP1P09430 55 aa7.94□□□□□ -1.14
GPN3-205ENST00000547323 MDN1Q9NU22 5596 aa7.94□□□□□ -1.14
GPN3-205ENST00000547323 KRTAP20-1Q3LI63 56 aa7.92□□□□□ -1.14
GPN3-205ENST00000547323 CDC42SE1Q9NRR8 79 aa7.86□□□□□ -1.15
GPN3-205ENST00000547323 SPRR2EP22531 72 aa7.84□□□□□ -1.15
GPN3-205ENST00000547323 SPRR2BP35325 72 aa7.84□□□□□ -1.15
GPN3-205ENST00000547323 SPRR2AP35326 72 aa7.84□□□□□ -1.15
GPN3-205ENST00000547323 LCE1AQ5T7P2 110 aa7.82□□□□□ -1.16
GPN3-205ENST00000547323 KRTAP19-7Q3SYF9 63 aa7.81□□□□□ -1.16
GPN3-205ENST00000547323 LCE3AQ5TA76 89 aa7.8□□□□□ -1.16
GPN3-205ENST00000547323 KRTAP19-5Q3LI72 72 aa7.75□□□□□ -1.17
GPN3-205ENST00000547323 MT1EP04732 61 aa7.72□□□□□ -1.17
GPN3-205ENST00000547323 KRTAP25-1Q3LHN0 102 aa7.71□□□□□ -1.18
GPN3-205ENST00000547323 KRTAP2-3P0C7H8 128 aa7.7□□□□□ -1.18
GPN3-205ENST00000547323 KRTAP2-4Q9BYR9 128 aa7.7□□□□□ -1.18
GPN3-205ENST00000547323 ROMO1P60602 79 aa7.59□□□□□ -1.19
GPN3-205ENST00000547323 SPRR2DP22532 72 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms