RNA–Protein interactions for RNA: ENST00000546443.5

CALCOCO1-203, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best)

Gene CALCOCO1, Length 1,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-203ENST00000546443 LPAP08519 4548 aa7.73□□□□□ -1.17
CALCOCO1-203ENST00000546443 LRP2P98164 4655 aa7.72□□□□□ -1.17
CALCOCO1-203ENST00000546443 LCE2BO14633 110 aa7.72□□□□□ -1.17
CALCOCO1-203ENST00000546443 A6NED7 52 aa7.7□□□□□ -1.18
CALCOCO1-203ENST00000546443 SEC61BP60468 96 aaKnown RBP7.7□□□□□ -1.18
CALCOCO1-203ENST00000546443 LCA10Q71F78 164 aa7.66□□□□□ -1.18
CALCOCO1-203ENST00000546443 A8MU10 97 aa7.65□□□□□ -1.18
CALCOCO1-203ENST00000546443 H1FX-AS1Q4G0G2 97 aa7.65□□□□□ -1.18
CALCOCO1-203ENST00000546443 SVIPQ8NHG7 77 aa7.65□□□□□ -1.18
CALCOCO1-203ENST00000546443 CDC42SE1Q9NRR8 79 aa7.63□□□□□ -1.19
CALCOCO1-203ENST00000546443 S4R3F8 94 aa7.63□□□□□ -1.19
CALCOCO1-203ENST00000546443 RBM12B-AS1Q9P1G2 102 aa7.62□□□□□ -1.19
CALCOCO1-203ENST00000546443 SEC61GP60059 68 aa7.61□□□□□ -1.19
CALCOCO1-203ENST00000546443 KRTAP4-1Q9BYQ7 146 aa7.6□□□□□ -1.19
CALCOCO1-203ENST00000546443 MUC17Q685J3 4493 aa7.56□□□□□ -1.2
CALCOCO1-203ENST00000546443 UQCR11O14957 56 aa7.55□□□□□ -1.2
CALCOCO1-203ENST00000546443 SPATA8Q6RVD6 105 aa7.54□□□□□ -1.2
CALCOCO1-203ENST00000546443 MIR22HGQ0VDD5 57 aa7.5□□□□□ -1.21
CALCOCO1-203ENST00000546443 KRTAP19-2Q3LHN2 52 aa7.47□□□□□ -1.21
CALCOCO1-203ENST00000546443 A0A1B0GU33 70 aa7.46□□□□□ -1.22
CALCOCO1-203ENST00000546443 KRTAP10-6P60371 365 aaPredicted RBP7.46□□□□□ -1.22
CALCOCO1-203ENST00000546443 PCLOQ9Y6V0 5065 aa7.45□□□□□ -1.22
CALCOCO1-203ENST00000546443 LOC100996750A0A140TA64 210 aa7.42□□□□□ -1.22
CALCOCO1-203ENST00000546443 CSAG1Q6PB30 78 aa7.42□□□□□ -1.22
CALCOCO1-203ENST00000546443 KRTAP4-6Q9BYQ5 205 aa7.42□□□□□ -1.22
CALCOCO1-203ENST00000546443 H0YAA0 97 aa7.41□□□□□ -1.22
CALCOCO1-203ENST00000546443 HERC1Q15751 4861 aa7.37□□□□□ -1.23
CALCOCO1-203ENST00000546443 HMCN2Q8NDA2 5059 aa7.36□□□□□ -1.23
CALCOCO1-203ENST00000546443 A6NN06 94 aa7.35□□□□□ -1.23
CALCOCO1-203ENST00000546443 PMAIP1Q13794 54 aa7.35□□□□□ -1.23
CALCOCO1-203ENST00000546443 P0C880 135 aa7.34□□□□□ -1.23
CALCOCO1-203ENST00000546443 ADM2Q7Z4H4 148 aa7.33□□□□□ -1.24
CALCOCO1-203ENST00000546443 LCE2AQ5TA79 106 aaPredicted RBP7.31□□□□□ -1.24
CALCOCO1-203ENST00000546443 KRTAP13-4Q3LI77 160 aa7.28□□□□□ -1.24
CALCOCO1-203ENST00000546443 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
CALCOCO1-203ENST00000546443 M0QZ58 72 aa7.14□□□□□ -1.27
CALCOCO1-203ENST00000546443 KTN1-AS1Q86SY8 53 aa7.13□□□□□ -1.27
CALCOCO1-203ENST00000546443 A0A0D9SG42 100 aa7.11□□□□□ -1.27
CALCOCO1-203ENST00000546443 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
CALCOCO1-203ENST00000546443 K7ERS5 55 aa7.06□□□□□ -1.28
CALCOCO1-203ENST00000546443 FLGP20930 4061 aaPredicted RBP7.06□□□□□ -1.28
CALCOCO1-203ENST00000546443 KRTAP12-1P59990 96 aa7.01□□□□□ -1.29
CALCOCO1-203ENST00000546443 R4GN34 69 aa7.01□□□□□ -1.29
CALCOCO1-203ENST00000546443 MUC2Q02817 5179 aa7□□□□□ -1.29
CALCOCO1-203ENST00000546443 KRTAP12-2P59991 146 aa7□□□□□ -1.29
CALCOCO1-203ENST00000546443 MT1HP80294 61 aa6.99□□□□□ -1.29
CALCOCO1-203ENST00000546443 RNF213Q63HN8 5207 aa6.94□□□□□ -1.3
CALCOCO1-203ENST00000546443 SPINT4Q6UDR6 99 aa6.92□□□□□ -1.3
CALCOCO1-203ENST00000546443 PRAC1Q96KF2 57 aa6.91□□□□□ -1.3
CALCOCO1-203ENST00000546443 LINC01554Q52M75 96 aa6.9□□□□□ -1.31
CALCOCO1-203ENST00000546443 CRIPTQ9P021 101 aa6.9□□□□□ -1.31
CALCOCO1-203ENST00000546443 ROMO1P60602 79 aa6.86□□□□□ -1.31
CALCOCO1-203ENST00000546443 M0R2T5 61 aa6.86□□□□□ -1.31
CALCOCO1-203ENST00000546443 UBR4Q5T4S7 5183 aa6.85□□□□□ -1.31
CALCOCO1-203ENST00000546443 FAT4Q6V0I7 4981 aa6.79□□□□□ -1.32
CALCOCO1-203ENST00000546443 KRTAP9-8Q9BYQ0 159 aa6.78□□□□□ -1.32
CALCOCO1-203ENST00000546443 MT2AP02795 61 aa6.77□□□□□ -1.33
CALCOCO1-203ENST00000546443 MT1FP04733 61 aa6.75□□□□□ -1.33
CALCOCO1-203ENST00000546443 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
CALCOCO1-203ENST00000546443 KRTAP19-1Q8IUB9 90 aa6.71□□□□□ -1.33
CALCOCO1-203ENST00000546443 KRTAP25-1Q3LHN0 102 aa6.71□□□□□ -1.34
CALCOCO1-203ENST00000546443 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
CALCOCO1-203ENST00000546443 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
CALCOCO1-203ENST00000546443 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
CALCOCO1-203ENST00000546443 CAMK2N1Q7Z7J9 78 aa6.59□□□□□ -1.35
CALCOCO1-203ENST00000546443 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
CALCOCO1-203ENST00000546443 KRTAP9-2Q9BYQ4 174 aa6.56□□□□□ -1.36
CALCOCO1-203ENST00000546443 KRTAP19-8Q3LI54 63 aa6.55□□□□□ -1.36
CALCOCO1-203ENST00000546443 KRTAP9-6A0A140TA67 174 aa6.54□□□□□ -1.36
CALCOCO1-203ENST00000546443 KRTAP9-3Q9BYQ3 159 aa6.53□□□□□ -1.36
CALCOCO1-203ENST00000546443 PLAC4Q8WY50 150 aa6.51□□□□□ -1.37
CALCOCO1-203ENST00000546443 MT1BP07438 61 aa6.45□□□□□ -1.38
CALCOCO1-203ENST00000546443 LCE3BQ5TA77 95 aa6.38□□□□□ -1.39
CALCOCO1-203ENST00000546443 TNP1P09430 55 aa6.33□□□□□ -1.4
CALCOCO1-203ENST00000546443 MT1XP80297 61 aa6.28□□□□□ -1.4
CALCOCO1-203ENST00000546443 KRTAP10-5P60370 271 aa6.27□□□□□ -1.41
CALCOCO1-203ENST00000546443 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
CALCOCO1-203ENST00000546443 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
CALCOCO1-203ENST00000546443 KRTAP4-12Q9BQ66 201 aa6.24□□□□□ -1.41
CALCOCO1-203ENST00000546443 KRTAP9-9Q9BYP9 154 aa6.23□□□□□ -1.41
CALCOCO1-203ENST00000546443 KRTAP9-4Q9BYQ2 154 aa6.23□□□□□ -1.41
CALCOCO1-203ENST00000546443 KRTAP4-8A0A0G2JLE6 195 aa6.21□□□□□ -1.42
CALCOCO1-203ENST00000546443 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
CALCOCO1-203ENST00000546443 LCE3AQ5TA76 89 aa6.06□□□□□ -1.44
CALCOCO1-203ENST00000546443 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
CALCOCO1-203ENST00000546443 KRTAP4-7Q9BYR0 210 aa6.03□□□□□ -1.44
CALCOCO1-203ENST00000546443 KRTAP15-1Q3LI76 137 aa6□□□□□ -1.45
CALCOCO1-203ENST00000546443 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
CALCOCO1-203ENST00000546443 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
CALCOCO1-203ENST00000546443 LCE1DQ5T752 114 aa5.94□□□□□ -1.46
CALCOCO1-203ENST00000546443 USH2AO75445 5202 aa5.92□□□□□ -1.46
CALCOCO1-203ENST00000546443 KRTAP19-6Q3LI70 58 aa5.86□□□□□ -1.47
CALCOCO1-203ENST00000546443 KRTAP4-9Q9BYQ8 210 aa5.81□□□□□ -1.48
CALCOCO1-203ENST00000546443 KRTAP12-3P60328 96 aa5.79□□□□□ -1.48
CALCOCO1-203ENST00000546443 SSPOA2VEC9 5147 aa5.78□□□□□ -1.48
CALCOCO1-203ENST00000546443 KRTAP4-2Q9BYR5 136 aa5.76□□□□□ -1.49
CALCOCO1-203ENST00000546443 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
CALCOCO1-203ENST00000546443 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.5
CALCOCO1-203ENST00000546443 KRTAP19-7Q3SYF9 63 aa5.6□□□□□ -1.51
CALCOCO1-203ENST00000546443 NDUFAF8A1L188 74 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms