RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 MUC2Q02817 5179 aa6.8□□□□□ -1.32
SCARB1-209ENST00000545305 LCA10Q71F78 164 aa6.79□□□□□ -1.32
SCARB1-209ENST00000545305 RPS28P62857 69 aaKnown RBP6.78□□□□□ -1.32
SCARB1-209ENST00000545305 LCE2CQ5TA81 110 aa6.74□□□□□ -1.33
SCARB1-209ENST00000545305 CSAG1Q6PB30 78 aa6.72□□□□□ -1.33
SCARB1-209ENST00000545305 KRTAP3-3Q9BYR6 98 aa6.71□□□□□ -1.34
SCARB1-209ENST00000545305 FLGP20930 4061 aaPredicted RBP6.7□□□□□ -1.34
SCARB1-209ENST00000545305 SMIM26A0A096LP01 95 aa6.69□□□□□ -1.34
SCARB1-209ENST00000545305 M0R2T5 61 aa6.65□□□□□ -1.34
SCARB1-209ENST00000545305 MT1HP80294 61 aa6.65□□□□□ -1.34
SCARB1-209ENST00000545305 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.35
SCARB1-209ENST00000545305 V9GYY9 64 aa6.62□□□□□ -1.35
SCARB1-209ENST00000545305 SEC61GP60059 68 aa6.59□□□□□ -1.35
SCARB1-209ENST00000545305 LINC01558Q9Y6Z2 57 aa6.58□□□□□ -1.36
SCARB1-209ENST00000545305 Q1T7F1 81 aa6.57□□□□□ -1.36
SCARB1-209ENST00000545305 PRR15LQ9BU68 103 aa6.56□□□□□ -1.36
SCARB1-209ENST00000545305 A0A1B0GU69 56 aa6.55□□□□□ -1.36
SCARB1-209ENST00000545305 H0YAA0 97 aa6.54□□□□□ -1.36
SCARB1-209ENST00000545305 ADM2Q7Z4H4 148 aa6.51□□□□□ -1.37
SCARB1-209ENST00000545305 PSPHP1O15172 72 aa6.47□□□□□ -1.37
SCARB1-209ENST00000545305 LCE2AQ5TA79 106 aaPredicted RBP6.46□□□□□ -1.38
SCARB1-209ENST00000545305 KRTAP10-6P60371 365 aaPredicted RBP6.44□□□□□ -1.38
SCARB1-209ENST00000545305 KRTAP3-2Q9BYR7 98 aa6.44□□□□□ -1.38
SCARB1-209ENST00000545305 P0C880 135 aa6.42□□□□□ -1.38
SCARB1-209ENST00000545305 Q5VV11 94 aa6.39□□□□□ -1.39
SCARB1-209ENST00000545305 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
SCARB1-209ENST00000545305 A0A1B0GU33 70 aa6.38□□□□□ -1.39
SCARB1-209ENST00000545305 LORP23490 312 aaPredicted RBP6.38□□□□□ -1.39
SCARB1-209ENST00000545305 MT2AP02795 61 aa6.36□□□□□ -1.39
SCARB1-209ENST00000545305 KRTAP9-8Q9BYQ0 159 aa6.36□□□□□ -1.39
SCARB1-209ENST00000545305 KRTAP10-10P60014 251 aa6.34□□□□□ -1.39
SCARB1-209ENST00000545305 UQCR11O14957 56 aa6.33□□□□□ -1.4
SCARB1-209ENST00000545305 CRIPTQ9P021 101 aa6.33□□□□□ -1.4
SCARB1-209ENST00000545305 R4GN34 69 aa6.32□□□□□ -1.4
SCARB1-209ENST00000545305 A6NED7 52 aa6.31□□□□□ -1.4
SCARB1-209ENST00000545305 MT1FP04733 61 aa6.31□□□□□ -1.4
SCARB1-209ENST00000545305 M0QZ58 72 aa6.3□□□□□ -1.4
SCARB1-209ENST00000545305 KRTAP9-6A0A140TA67 174 aa6.25□□□□□ -1.41
SCARB1-209ENST00000545305 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
SCARB1-209ENST00000545305 MIR22HGQ0VDD5 57 aa6.24□□□□□ -1.41
SCARB1-209ENST00000545305 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
SCARB1-209ENST00000545305 LINC01554Q52M75 96 aa6.18□□□□□ -1.42
SCARB1-209ENST00000545305 SPRR2GQ9BYE4 73 aa6.17□□□□□ -1.42
SCARB1-209ENST00000545305 A0A0D9SG42 100 aa6.16□□□□□ -1.42
SCARB1-209ENST00000545305 CDC42SE1Q9NRR8 79 aa6.16□□□□□ -1.42
SCARB1-209ENST00000545305 KRTAP9-3Q9BYQ3 159 aa6.15□□□□□ -1.42
SCARB1-209ENST00000545305 A8MU10 97 aa6.14□□□□□ -1.43
SCARB1-209ENST00000545305 KRTAP19-1Q8IUB9 90 aa6.14□□□□□ -1.43
SCARB1-209ENST00000545305 BRK1Q8WUW1 75 aa6.13□□□□□ -1.43
SCARB1-209ENST00000545305 LCE2DQ5TA82 110 aaPredicted RBP6.08□□□□□ -1.44
SCARB1-209ENST00000545305 A6NN06 94 aa6.06□□□□□ -1.44
SCARB1-209ENST00000545305 K7ERS5 55 aa6.05□□□□□ -1.44
SCARB1-209ENST00000545305 FSIP2Q5CZC0 6907 aa6.05□□□□□ -1.44
SCARB1-209ENST00000545305 SPINT4Q6UDR6 99 aa6.04□□□□□ -1.44
SCARB1-209ENST00000545305 KRTAP19-8Q3LI54 63 aa6.03□□□□□ -1.44
SCARB1-209ENST00000545305 KRTAP12-1P59990 96 aa6.01□□□□□ -1.45
SCARB1-209ENST00000545305 PLAC4Q8WY50 150 aa6.01□□□□□ -1.45
SCARB1-209ENST00000545305 CRCT1Q9UGL9 99 aa6.01□□□□□ -1.45
SCARB1-209ENST00000545305 LCE2BO14633 110 aa5.99□□□□□ -1.45
SCARB1-209ENST00000545305 KRTAP12-2P59991 146 aa5.98□□□□□ -1.45
SCARB1-209ENST00000545305 MT1BP07438 61 aa5.94□□□□□ -1.46
SCARB1-209ENST00000545305 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
SCARB1-209ENST00000545305 PRO0628Q9UI54 55 aa5.91□□□□□ -1.46
SCARB1-209ENST00000545305 USH2AO75445 5202 aa5.83□□□□□ -1.48
SCARB1-209ENST00000545305 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
SCARB1-209ENST00000545305 PRO2289Q9P1D8 64 aa5.76□□□□□ -1.49
SCARB1-209ENST00000545305 ROMO1P60602 79 aa5.72□□□□□ -1.49
SCARB1-209ENST00000545305 MT1XP80297 61 aa5.72□□□□□ -1.49
SCARB1-209ENST00000545305 KRTAP10-5P60370 271 aa5.71□□□□□ -1.5
SCARB1-209ENST00000545305 C10orf95Q9H7T3 257 aa5.69□□□□□ -1.5
SCARB1-209ENST00000545305 KRTAP19-6Q3LI70 58 aa5.68□□□□□ -1.5
SCARB1-209ENST00000545305 SSPOA2VEC9 5147 aa5.66□□□□□ -1.5
SCARB1-209ENST00000545305 KRTAP9-7A8MTY7 169 aa5.6□□□□□ -1.51
SCARB1-209ENST00000545305 TNP1P09430 55 aa5.6□□□□□ -1.51
SCARB1-209ENST00000545305 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.59□□□□□ -1.51
SCARB1-209ENST00000545305 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
SCARB1-209ENST00000545305 KTN1-AS1Q86SY8 53 aa5.51□□□□□ -1.53
SCARB1-209ENST00000545305 KRTAP10-7P60409 375 aaPredicted RBP5.48□□□□□ -1.53
SCARB1-209ENST00000545305 FCGBPQ9Y6R7 5405 aaPredicted RBP5.45□□□□□ -1.54
SCARB1-209ENST00000545305 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
SCARB1-209ENST00000545305 PRAC1Q96KF2 57 aa5.4□□□□□ -1.54
SCARB1-209ENST00000545305 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
SCARB1-209ENST00000545305 KRTAP23-1A1A580 65 aa5.37□□□□□ -1.55
SCARB1-209ENST00000545305 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
SCARB1-209ENST00000545305 SYNE2Q8WXH0 6885 aaKnown RBP5.35□□□□□ -1.55
SCARB1-209ENST00000545305 LCE3AQ5TA76 89 aa5.35□□□□□ -1.55
SCARB1-209ENST00000545305 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
SCARB1-209ENST00000545305 KRTAP4-8Q9BYQ9 185 aa5.27□□□□□ -1.57
SCARB1-209ENST00000545305 KRTAP8-1Q8IUC2 63 aa5.24□□□□□ -1.57
SCARB1-209ENST00000545305 SVIPQ8NHG7 77 aa5.24□□□□□ -1.57
SCARB1-209ENST00000545305 KMT2DO14686 5537 aa5.19□□□□□ -1.58
SCARB1-209ENST00000545305 KRTAP6-3Q3LI67 103 aa5.17□□□□□ -1.58
SCARB1-209ENST00000545305 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
SCARB1-209ENST00000545305 KRTAP12-3P60328 96 aa5.15□□□□□ -1.59
SCARB1-209ENST00000545305 KRTAP19-7Q3SYF9 63 aa5.09□□□□□ -1.59
SCARB1-209ENST00000545305 SPRR2FQ96RM1 72 aa5.06□□□□□ -1.6
SCARB1-209ENST00000545305 NEBP20929 6669 aa5.05□□□□□ -1.6
SCARB1-209ENST00000545305 MT1EP04732 61 aa5.04□□□□□ -1.6
SCARB1-209ENST00000545305 KRTAP5-9P26371 169 aa5.01□□□□□ -1.61
SCARB1-209ENST00000545305 KRTAP15-1Q3LI76 137 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms