RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 KRTAP3-1Q9BYR8 98 aa9.55□□□□□ -0.88
TNFAIP1-202ENST00000544907 RPL37P61927 97 aaKnown RBP9.53□□□□□ -0.88
TNFAIP1-202ENST00000544907 COX6B2Q6YFQ2 88 aa9.53□□□□□ -0.88
TNFAIP1-202ENST00000544907 A6NN06 94 aa9.52□□□□□ -0.89
TNFAIP1-202ENST00000544907 SEC61GP60059 68 aa9.52□□□□□ -0.89
TNFAIP1-202ENST00000544907 MIR22HGQ0VDD5 57 aa9.46□□□□□ -0.89
TNFAIP1-202ENST00000544907 XP32Q5T750 250 aa9.45□□□□□ -0.9
TNFAIP1-202ENST00000544907 KTN1-AS1Q86SY8 53 aa9.44□□□□□ -0.9
TNFAIP1-202ENST00000544907 HERC1Q15751 4861 aa9.4□□□□□ -0.9
TNFAIP1-202ENST00000544907 TPRXLQ17RH7 258 aa9.3□□□□□ -0.92
TNFAIP1-202ENST00000544907 A0A1B0GU33 70 aa9.26□□□□□ -0.93
TNFAIP1-202ENST00000544907 H1FX-AS1Q4G0G2 97 aa9.23□□□□□ -0.93
TNFAIP1-202ENST00000544907 HMCN2Q8NDA2 5059 aa9.2□□□□□ -0.94
TNFAIP1-202ENST00000544907 H0YAA0 97 aa9.2□□□□□ -0.94
TNFAIP1-202ENST00000544907 KRTAP3-3Q9BYR6 98 aa9.19□□□□□ -0.94
TNFAIP1-202ENST00000544907 S4R3F8 94 aa9.16□□□□□ -0.94
TNFAIP1-202ENST00000544907 KRTAP10-6P60371 365 aaPredicted RBP9.05□□□□□ -0.96
TNFAIP1-202ENST00000544907 RBM12B-AS1Q9P1G2 102 aa9.04□□□□□ -0.96
TNFAIP1-202ENST00000544907 LPAP08519 4548 aa9.04□□□□□ -0.96
TNFAIP1-202ENST00000544907 LRP2P98164 4655 aa9.02□□□□□ -0.97
TNFAIP1-202ENST00000544907 KRTAP3-2Q9BYR7 98 aa9□□□□□ -0.97
TNFAIP1-202ENST00000544907 K7ERS5 55 aa8.97□□□□□ -0.97
TNFAIP1-202ENST00000544907 SEC61BP60468 96 aaKnown RBP8.94□□□□□ -0.98
TNFAIP1-202ENST00000544907 CSAG1Q6PB30 78 aa8.91□□□□□ -0.98
TNFAIP1-202ENST00000544907 UBR4Q5T4S7 5183 aa8.89□□□□□ -0.99
TNFAIP1-202ENST00000544907 ADM2Q7Z4H4 148 aa8.88□□□□□ -0.99
TNFAIP1-202ENST00000544907 PRAC1Q96KF2 57 aa8.88□□□□□ -0.99
TNFAIP1-202ENST00000544907 KRTAP13-4Q3LI77 160 aa8.83□□□□□ -1
TNFAIP1-202ENST00000544907 P0C880 135 aa8.82□□□□□ -1
TNFAIP1-202ENST00000544907 M0QZ58 72 aa8.76□□□□□ -1.01
TNFAIP1-202ENST00000544907 MUC17Q685J3 4493 aa8.71□□□□□ -1.02
TNFAIP1-202ENST00000544907 RNF213Q63HN8 5207 aa8.68□□□□□ -1.02
TNFAIP1-202ENST00000544907 ROMO1P60602 79 aa8.68□□□□□ -1.02
TNFAIP1-202ENST00000544907 A0A0D9SG42 100 aa8.67□□□□□ -1.02
TNFAIP1-202ENST00000544907 LINC01554Q52M75 96 aa8.67□□□□□ -1.02
TNFAIP1-202ENST00000544907 KRTAP25-1Q3LHN0 102 aa8.64□□□□□ -1.03
TNFAIP1-202ENST00000544907 KRTAP4-1Q9BYQ7 146 aa8.62□□□□□ -1.03
TNFAIP1-202ENST00000544907 MUC2Q02817 5179 aa8.61□□□□□ -1.03
TNFAIP1-202ENST00000544907 KRTAP19-2Q3LHN2 52 aa8.57□□□□□ -1.04
TNFAIP1-202ENST00000544907 KRTAP12-1P59990 96 aa8.56□□□□□ -1.04
TNFAIP1-202ENST00000544907 KRTAP12-2P59991 146 aa8.54□□□□□ -1.04
TNFAIP1-202ENST00000544907 R4GN34 69 aa8.46□□□□□ -1.05
TNFAIP1-202ENST00000544907 SPINT4Q6UDR6 99 aa8.45□□□□□ -1.06
TNFAIP1-202ENST00000544907 FAT4Q6V0I7 4981 aa8.33□□□□□ -1.08
TNFAIP1-202ENST00000544907 CRIPTQ9P021 101 aa8.31□□□□□ -1.08
TNFAIP1-202ENST00000544907 LCE2DQ5TA82 110 aaPredicted RBP8.3□□□□□ -1.08
TNFAIP1-202ENST00000544907 FLGP20930 4061 aaPredicted RBP8.3□□□□□ -1.08
TNFAIP1-202ENST00000544907 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.08
TNFAIP1-202ENST00000544907 LCE2CQ5TA81 110 aa8.27□□□□□ -1.09
TNFAIP1-202ENST00000544907 LCE2AQ5TA79 106 aaPredicted RBP8.19□□□□□ -1.1
TNFAIP1-202ENST00000544907 MT1HP80294 61 aa8.17□□□□□ -1.1
TNFAIP1-202ENST00000544907 C10orf95Q9H7T3 257 aa8.14□□□□□ -1.11
TNFAIP1-202ENST00000544907 M0R2T5 61 aa8.1□□□□□ -1.11
TNFAIP1-202ENST00000544907 CAMK2N1Q7Z7J9 78 aa7.98□□□□□ -1.13
TNFAIP1-202ENST00000544907 SPRR2GQ9BYE4 73 aa7.93□□□□□ -1.14
TNFAIP1-202ENST00000544907 PP632Q6XCG6 107 aa7.91□□□□□ -1.14
TNFAIP1-202ENST00000544907 KRTAP9-2Q9BYQ4 174 aa7.87□□□□□ -1.15
TNFAIP1-202ENST00000544907 KRTAP23-1A1A580 65 aa7.8□□□□□ -1.16
TNFAIP1-202ENST00000544907 KRTAP15-1Q3LI76 137 aa7.8□□□□□ -1.16
TNFAIP1-202ENST00000544907 KRTAP19-1Q8IUB9 90 aa7.79□□□□□ -1.16
TNFAIP1-202ENST00000544907 KRTAP9-8Q9BYQ0 159 aa7.77□□□□□ -1.17
TNFAIP1-202ENST00000544907 TNP1P09430 55 aa7.74□□□□□ -1.17
TNFAIP1-202ENST00000544907 PLAC4Q8WY50 150 aa7.74□□□□□ -1.17
TNFAIP1-202ENST00000544907 MT2AP02795 61 aa7.73□□□□□ -1.17
TNFAIP1-202ENST00000544907 MT1FP04733 61 aa7.68□□□□□ -1.18
TNFAIP1-202ENST00000544907 KRTAP10-10P60014 251 aa7.67□□□□□ -1.18
TNFAIP1-202ENST00000544907 KRTAP19-8Q3LI54 63 aa7.63□□□□□ -1.19
TNFAIP1-202ENST00000544907 KRTAP9-6A0A140TA67 174 aa7.61□□□□□ -1.19
TNFAIP1-202ENST00000544907 KRTAP9-3Q9BYQ3 159 aa7.51□□□□□ -1.21
TNFAIP1-202ENST00000544907 FSIP2Q5CZC0 6907 aa7.47□□□□□ -1.21
TNFAIP1-202ENST00000544907 MT1BP07438 61 aa7.43□□□□□ -1.22
TNFAIP1-202ENST00000544907 CRCT1Q9UGL9 99 aa7.42□□□□□ -1.22
TNFAIP1-202ENST00000544907 H3BS24 57 aa7.41□□□□□ -1.22
TNFAIP1-202ENST00000544907 NDUFAF8A1L188 74 aa7.39□□□□□ -1.23
TNFAIP1-202ENST00000544907 LCE2BO14633 110 aa7.39□□□□□ -1.23
TNFAIP1-202ENST00000544907 KRTAP10-5P60370 271 aa7.32□□□□□ -1.24
TNFAIP1-202ENST00000544907 MT1XP80297 61 aa7.32□□□□□ -1.24
TNFAIP1-202ENST00000544907 USH2AO75445 5202 aa7.3□□□□□ -1.24
TNFAIP1-202ENST00000544907 LCE3AQ5TA76 89 aa7.25□□□□□ -1.25
TNFAIP1-202ENST00000544907 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
TNFAIP1-202ENST00000544907 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
TNFAIP1-202ENST00000544907 LUZP6Q538Z0 58 aa7.22□□□□□ -1.25
TNFAIP1-202ENST00000544907 PRO2289Q9P1D8 64 aa7.22□□□□□ -1.25
TNFAIP1-202ENST00000544907 SSPOA2VEC9 5147 aa7.15□□□□□ -1.26
TNFAIP1-202ENST00000544907 KRTAP10-12P60413 245 aa7.12□□□□□ -1.27
TNFAIP1-202ENST00000544907 KRTAP19-6Q3LI70 58 aa7.06□□□□□ -1.28
TNFAIP1-202ENST00000544907 KRTAP10-7P60409 375 aaPredicted RBP7.01□□□□□ -1.29
TNFAIP1-202ENST00000544907 KRTAP12-3P60328 96 aa6.99□□□□□ -1.29
TNFAIP1-202ENST00000544907 FCGBPQ9Y6R7 5405 aaPredicted RBP6.93□□□□□ -1.3
TNFAIP1-202ENST00000544907 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.92□□□□□ -1.3
TNFAIP1-202ENST00000544907 KRTAP9-7A8MTY7 169 aa6.84□□□□□ -1.31
TNFAIP1-202ENST00000544907 KRTAP19-5Q3LI72 72 aa6.71□□□□□ -1.34
TNFAIP1-202ENST00000544907 A0A0A0MQY5 61 aa6.7□□□□□ -1.34
TNFAIP1-202ENST00000544907 MACF1Q9UPN3 7388 aaKnown RBP6.68□□□□□ -1.34
TNFAIP1-202ENST00000544907 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.35
TNFAIP1-202ENST00000544907 SYNE2Q8WXH0 6885 aaKnown RBP6.58□□□□□ -1.36
TNFAIP1-202ENST00000544907 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
TNFAIP1-202ENST00000544907 KRTAP4-8A0A0G2JLE6 195 aa6.56□□□□□ -1.36
TNFAIP1-202ENST00000544907 KRTAP4-8Q9BYQ9 185 aa6.56□□□□□ -1.36
TNFAIP1-202ENST00000544907 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms