RNA–Protein interactions for RNA: ENST00000544299.5

CHERP-202, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

TSL 2

Gene CHERP, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-202ENST00000544299 A6NED7 52 aa9.44□□□□□ -0.9
CHERP-202ENST00000544299 HMCN2Q8NDA2 5059 aa9.39□□□□□ -0.91
CHERP-202ENST00000544299 A0A1B0GU69 56 aa9.38□□□□□ -0.91
CHERP-202ENST00000544299 CDC42SE1Q9NRR8 79 aa9.37□□□□□ -0.91
CHERP-202ENST00000544299 SEC61BP60468 96 aaKnown RBP9.35□□□□□ -0.91
CHERP-202ENST00000544299 MUC17Q685J3 4493 aa9.33□□□□□ -0.92
CHERP-202ENST00000544299 COX6B2Q6YFQ2 88 aa9.29□□□□□ -0.92
CHERP-202ENST00000544299 KRTAP4-1Q9BYQ7 146 aa9.28□□□□□ -0.92
CHERP-202ENST00000544299 KRTAP3-1Q9BYR8 98 aa9.28□□□□□ -0.92
CHERP-202ENST00000544299 LCA10Q71F78 164 aa9.27□□□□□ -0.92
CHERP-202ENST00000544299 UQCR11O14957 56 aa9.21□□□□□ -0.94
CHERP-202ENST00000544299 PMAIP1Q13794 54 aa9.15□□□□□ -0.94
CHERP-202ENST00000544299 SPATA8Q6RVD6 105 aa9.14□□□□□ -0.95
CHERP-202ENST00000544299 A8MU10 97 aa9.13□□□□□ -0.95
CHERP-202ENST00000544299 MIR22HGQ0VDD5 57 aa9.1□□□□□ -0.95
CHERP-202ENST00000544299 RBM12B-AS1Q9P1G2 102 aa9.07□□□□□ -0.96
CHERP-202ENST00000544299 KRTAP19-2Q3LHN2 52 aa9.04□□□□□ -0.96
CHERP-202ENST00000544299 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
CHERP-202ENST00000544299 A6NN06 94 aa9.01□□□□□ -0.97
CHERP-202ENST00000544299 S4R3F8 94 aa8.96□□□□□ -0.98
CHERP-202ENST00000544299 A0A1B0GU33 70 aa8.95□□□□□ -0.98
CHERP-202ENST00000544299 KRTAP3-3Q9BYR6 98 aa8.95□□□□□ -0.98
CHERP-202ENST00000544299 KTN1-AS1Q86SY8 53 aa8.94□□□□□ -0.98
CHERP-202ENST00000544299 UBR4Q5T4S7 5183 aa8.93□□□□□ -0.98
CHERP-202ENST00000544299 MUC2Q02817 5179 aa8.89□□□□□ -0.99
CHERP-202ENST00000544299 RNF213Q63HN8 5207 aa8.89□□□□□ -0.99
CHERP-202ENST00000544299 LCE2CQ5TA81 110 aa8.82□□□□□ -1
CHERP-202ENST00000544299 H0YAA0 97 aa8.81□□□□□ -1
CHERP-202ENST00000544299 FLGP20930 4061 aaPredicted RBP8.75□□□□□ -1.01
CHERP-202ENST00000544299 CSAG1Q6PB30 78 aa8.74□□□□□ -1.01
CHERP-202ENST00000544299 K7ERS5 55 aa8.72□□□□□ -1.01
CHERP-202ENST00000544299 KRTAP10-6P60371 365 aaPredicted RBP8.71□□□□□ -1.01
CHERP-202ENST00000544299 KRTAP3-2Q9BYR7 98 aa8.68□□□□□ -1.02
CHERP-202ENST00000544299 MT1HP80294 61 aa8.61□□□□□ -1.03
CHERP-202ENST00000544299 FAT4Q6V0I7 4981 aa8.59□□□□□ -1.03
CHERP-202ENST00000544299 ADM2Q7Z4H4 148 aa8.58□□□□□ -1.04
CHERP-202ENST00000544299 P0C880 135 aa8.54□□□□□ -1.04
CHERP-202ENST00000544299 M0QZ58 72 aa8.53□□□□□ -1.04
CHERP-202ENST00000544299 KRTAP13-4Q3LI77 160 aa8.48□□□□□ -1.05
CHERP-202ENST00000544299 M0R2T5 61 aa8.44□□□□□ -1.06
CHERP-202ENST00000544299 PRAC1Q96KF2 57 aa8.4□□□□□ -1.06
CHERP-202ENST00000544299 A0A0D9SG42 100 aa8.4□□□□□ -1.07
CHERP-202ENST00000544299 H3BS24 57 aa8.35□□□□□ -1.07
CHERP-202ENST00000544299 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
CHERP-202ENST00000544299 ROMO1P60602 79 aa8.35□□□□□ -1.07
CHERP-202ENST00000544299 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
CHERP-202ENST00000544299 KRTAP9-8Q9BYQ0 159 aa8.3□□□□□ -1.08
CHERP-202ENST00000544299 R4GN34 69 aa8.29□□□□□ -1.08
CHERP-202ENST00000544299 MT2AP02795 61 aa8.27□□□□□ -1.08
CHERP-202ENST00000544299 KRTAP12-1P59990 96 aa8.25□□□□□ -1.09
CHERP-202ENST00000544299 MT1FP04733 61 aa8.24□□□□□ -1.09
CHERP-202ENST00000544299 KRTAP25-1Q3LHN0 102 aa8.22□□□□□ -1.09
CHERP-202ENST00000544299 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
CHERP-202ENST00000544299 SPINT4Q6UDR6 99 aa8.22□□□□□ -1.09
CHERP-202ENST00000544299 LINC01554Q52M75 96 aa8.2□□□□□ -1.1
CHERP-202ENST00000544299 CRIPTQ9P021 101 aa8.17□□□□□ -1.1
CHERP-202ENST00000544299 KRTAP10-10P60014 251 aa8.15□□□□□ -1.1
CHERP-202ENST00000544299 KRTAP19-1Q8IUB9 90 aa8.08□□□□□ -1.12
CHERP-202ENST00000544299 SPRR2GQ9BYE4 73 aa8.07□□□□□ -1.12
CHERP-202ENST00000544299 KRTAP9-3Q9BYQ3 159 aa8.01□□□□□ -1.13
CHERP-202ENST00000544299 KRTAP19-8Q3LI54 63 aa7.88□□□□□ -1.15
CHERP-202ENST00000544299 CAMK2N1Q7Z7J9 78 aa7.83□□□□□ -1.16
CHERP-202ENST00000544299 LCE2BO14633 110 aa7.8□□□□□ -1.16
CHERP-202ENST00000544299 MT1BP07438 61 aa7.8□□□□□ -1.16
CHERP-202ENST00000544299 C10orf95Q9H7T3 257 aa7.77□□□□□ -1.17
CHERP-202ENST00000544299 PLAC4Q8WY50 150 aa7.72□□□□□ -1.17
CHERP-202ENST00000544299 PP632Q6XCG6 107 aa7.67□□□□□ -1.18
CHERP-202ENST00000544299 KRTAP9-2Q9BYQ4 174 aa7.67□□□□□ -1.18
CHERP-202ENST00000544299 LCE2DQ5TA82 110 aaPredicted RBP7.56□□□□□ -1.2
CHERP-202ENST00000544299 KRTAP23-1A1A580 65 aa7.56□□□□□ -1.2
CHERP-202ENST00000544299 TNP1P09430 55 aa7.56□□□□□ -1.2
CHERP-202ENST00000544299 USH2AO75445 5202 aa7.55□□□□□ -1.2
CHERP-202ENST00000544299 MT1XP80297 61 aa7.54□□□□□ -1.2
CHERP-202ENST00000544299 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
CHERP-202ENST00000544299 FSIP2Q5CZC0 6907 aa7.51□□□□□ -1.21
CHERP-202ENST00000544299 KRTAP15-1Q3LI76 137 aa7.37□□□□□ -1.23
CHERP-202ENST00000544299 A0A0A0MQY5 61 aa7.36□□□□□ -1.23
CHERP-202ENST00000544299 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
CHERP-202ENST00000544299 KRTAP19-6Q3LI70 58 aa7.31□□□□□ -1.24
CHERP-202ENST00000544299 SSPOA2VEC9 5147 aa7.3□□□□□ -1.24
CHERP-202ENST00000544299 CRCT1Q9UGL9 99 aa7.3□□□□□ -1.24
CHERP-202ENST00000544299 KRTAP9-6A0A140TA67 174 aa7.29□□□□□ -1.24
CHERP-202ENST00000544299 KRTAP10-7P60409 375 aaPredicted RBP7.22□□□□□ -1.25
CHERP-202ENST00000544299 KRTAP10-12P60413 245 aa7.12□□□□□ -1.27
CHERP-202ENST00000544299 LCE3AQ5TA76 89 aa7.08□□□□□ -1.28
CHERP-202ENST00000544299 NDUFAF8A1L188 74 aa7.02□□□□□ -1.29
CHERP-202ENST00000544299 FCGBPQ9Y6R7 5405 aaPredicted RBP7□□□□□ -1.29
CHERP-202ENST00000544299 KRTAP8-1Q8IUC2 63 aa7□□□□□ -1.29
CHERP-202ENST00000544299 LUZP6Q538Z0 58 aa6.96□□□□□ -1.3
CHERP-202ENST00000544299 KRTAP4-8A0A0G2JLE6 195 aa6.95□□□□□ -1.3
CHERP-202ENST00000544299 KRTAP4-8Q9BYQ9 185 aa6.95□□□□□ -1.3
CHERP-202ENST00000544299 SPRR5A0A1B0GTR4 108 aa6.89□□□□□ -1.31
CHERP-202ENST00000544299 KMT2DO14686 5537 aa6.84□□□□□ -1.32
CHERP-202ENST00000544299 KRTAP12-3P60328 96 aa6.8□□□□□ -1.32
CHERP-202ENST00000544299 KRTAP19-5Q3LI72 72 aa6.78□□□□□ -1.32
CHERP-202ENST00000544299 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.77□□□□□ -1.33
CHERP-202ENST00000544299 KRTAP19-7Q3SYF9 63 aa6.72□□□□□ -1.33
CHERP-202ENST00000544299 MACF1Q9UPN3 7388 aaKnown RBP6.72□□□□□ -1.33
CHERP-202ENST00000544299 SYNE2Q8WXH0 6885 aaKnown RBP6.64□□□□□ -1.35
CHERP-202ENST00000544299 KRTAP9-7A8MTY7 169 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms