RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 LOC101927531A0A1B0GV80 90 aa9.06□□□□□ -0.96
TMED3-204ENST00000543455 IGKV2-30P06310 120 aa9.06□□□□□ -0.96
TMED3-204ENST00000543455 KRTAP9-3Q9BYQ3 159 aa9.05□□□□□ -0.96
TMED3-204ENST00000543455 ATP5EP56381 51 aaPredicted RBP9.04□□□□□ -0.96
TMED3-204ENST00000543455 CYSTM1Q9H1C7 97 aa9.04□□□□□ -0.96
TMED3-204ENST00000543455 LCE2BO14633 110 aa9.03□□□□□ -0.96
TMED3-204ENST00000543455 IGKV2D-30A0A075B6S6 120 aa9.02□□□□□ -0.96
TMED3-204ENST00000543455 KRTAP10-10P60014 251 aa9.02□□□□□ -0.97
TMED3-204ENST00000543455 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.97
TMED3-204ENST00000543455 CYP4F30PQ9H0H9 118 aa9.02□□□□□ -0.97
TMED3-204ENST00000543455 RPS28P62857 69 aaKnown RBP8.94□□□□□ -0.98
TMED3-204ENST00000543455 SPANXA2-OT1Q8N9U9 137 aa8.9□□□□□ -0.98
TMED3-204ENST00000543455 FCGBPQ9Y6R7 5405 aaPredicted RBP8.89□□□□□ -0.99
TMED3-204ENST00000543455 H1FX-AS1Q4G0G2 97 aa8.86□□□□□ -0.99
TMED3-204ENST00000543455 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.85□□□□□ -0.99
TMED3-204ENST00000543455 KRTAP19-1Q8IUB9 90 aa8.85□□□□□ -0.99
TMED3-204ENST00000543455 SERP1Q9Y6X1 66 aa8.85□□□□□ -0.99
TMED3-204ENST00000543455 C4orf26Q17RF5 130 aa8.81□□□□□ -1
TMED3-204ENST00000543455 KRTAP9-7A8MTY7 169 aa8.73□□□□□ -1.01
TMED3-204ENST00000543455 KRTAP3-1Q9BYR8 98 aa8.71□□□□□ -1.01
TMED3-204ENST00000543455 KRTAP19-6Q3LI70 58 aa8.69□□□□□ -1.02
TMED3-204ENST00000543455 DMAC1Q96GE9 116 aa8.69□□□□□ -1.02
TMED3-204ENST00000543455 A8MUN3 132 aa8.68□□□□□ -1.02
TMED3-204ENST00000543455 SMIM26A0A096LP01 95 aa8.64□□□□□ -1.03
TMED3-204ENST00000543455 ACYP2P14621 99 aa8.6□□□□□ -1.03
TMED3-204ENST00000543455 MACF1Q9UPN3 7388 aaKnown RBP8.57□□□□□ -1.04
TMED3-204ENST00000543455 COA5Q86WW8 74 aa8.54□□□□□ -1.04
TMED3-204ENST00000543455 S4R3F8 94 aa8.53□□□□□ -1.04
TMED3-204ENST00000543455 LCA10Q71F78 164 aa8.51□□□□□ -1.05
TMED3-204ENST00000543455 SYNE2Q8WXH0 6885 aaKnown RBP8.5□□□□□ -1.05
TMED3-204ENST00000543455 V9GYY9 64 aa8.5□□□□□ -1.05
TMED3-204ENST00000543455 CSAG1Q6PB30 78 aa8.45□□□□□ -1.06
TMED3-204ENST00000543455 Q1T7F1 81 aa8.45□□□□□ -1.06
TMED3-204ENST00000543455 KRTAP3-3Q9BYR6 98 aa8.45□□□□□ -1.06
TMED3-204ENST00000543455 CHKB-CPT1BH3BT56 60 aa8.44□□□□□ -1.06
TMED3-204ENST00000543455 MT1BP07438 61 aa8.39□□□□□ -1.07
TMED3-204ENST00000543455 SPRR2GQ9BYE4 73 aa8.38□□□□□ -1.07
TMED3-204ENST00000543455 KRTAP19-8Q3LI54 63 aa8.35□□□□□ -1.07
TMED3-204ENST00000543455 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
TMED3-204ENST00000543455 LINC01558Q9Y6Z2 57 aa8.3□□□□□ -1.08
TMED3-204ENST00000543455 Q5VV11 94 aa8.28□□□□□ -1.08
TMED3-204ENST00000543455 KRTAP6-3Q3LI67 103 aa8.26□□□□□ -1.09
TMED3-204ENST00000543455 A6NN06 94 aa8.21□□□□□ -1.09
TMED3-204ENST00000543455 PRR15LQ9BU68 103 aa8.19□□□□□ -1.1
TMED3-204ENST00000543455 SVIPQ8NHG7 77 aa8.19□□□□□ -1.1
TMED3-204ENST00000543455 KRTAP10-5P60370 271 aa8.17□□□□□ -1.1
TMED3-204ENST00000543455 PSPHP1O15172 72 aa8.16□□□□□ -1.1
TMED3-204ENST00000543455 H0YAA0 97 aa8.15□□□□□ -1.1
TMED3-204ENST00000543455 CRIPTQ9P021 101 aa8.14□□□□□ -1.11
TMED3-204ENST00000543455 A0A1B0GU69 56 aa8.12□□□□□ -1.11
TMED3-204ENST00000543455 SEC61GP60059 68 aa8.11□□□□□ -1.11
TMED3-204ENST00000543455 ADM2Q7Z4H4 148 aa8.07□□□□□ -1.12
TMED3-204ENST00000543455 KRTAP3-2Q9BYR7 98 aa8.07□□□□□ -1.12
TMED3-204ENST00000543455 NEBP20929 6669 aa8.02□□□□□ -1.13
TMED3-204ENST00000543455 P0C880 135 aa8□□□□□ -1.13
TMED3-204ENST00000543455 MUC12Q9UKN1 5478 aa8□□□□□ -1.13
TMED3-204ENST00000543455 A6NED7 52 aa7.98□□□□□ -1.13
TMED3-204ENST00000543455 BRK1Q8WUW1 75 aa7.96□□□□□ -1.13
TMED3-204ENST00000543455 PRO0628Q9UI54 55 aa7.94□□□□□ -1.14
TMED3-204ENST00000543455 UQCR11O14957 56 aa7.93□□□□□ -1.14
TMED3-204ENST00000543455 CDC42SE1Q9NRR8 79 aa7.9□□□□□ -1.14
TMED3-204ENST00000543455 KRTAP5-9P26371 169 aa7.89□□□□□ -1.15
TMED3-204ENST00000543455 A0A1B0GU33 70 aa7.87□□□□□ -1.15
TMED3-204ENST00000543455 MT1XP80297 61 aa7.85□□□□□ -1.15
TMED3-204ENST00000543455 SPATA8Q6RVD6 105 aa7.84□□□□□ -1.15
TMED3-204ENST00000543455 KMT2DO14686 5537 aa7.84□□□□□ -1.15
TMED3-204ENST00000543455 M0QZ58 72 aa7.81□□□□□ -1.16
TMED3-204ENST00000543455 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
TMED3-204ENST00000543455 R4GN34 69 aa7.81□□□□□ -1.16
TMED3-204ENST00000543455 MDN1Q9NU22 5596 aa7.78□□□□□ -1.16
TMED3-204ENST00000543455 KRTAP13-4Q3LI77 160 aa7.76□□□□□ -1.17
TMED3-204ENST00000543455 PLAC4Q8WY50 150 aa7.75□□□□□ -1.17
TMED3-204ENST00000543455 PRO2289Q9P1D8 64 aa7.74□□□□□ -1.17
TMED3-204ENST00000543455 A8MU10 97 aa7.65□□□□□ -1.18
TMED3-204ENST00000543455 LINC01554Q52M75 96 aa7.63□□□□□ -1.19
TMED3-204ENST00000543455 KRTAP12-2P59991 146 aa7.62□□□□□ -1.19
TMED3-204ENST00000543455 KRTAP20-1Q3LI63 56 aa7.62□□□□□ -1.19
TMED3-204ENST00000543455 SPRR2FQ96RM1 72 aa7.61□□□□□ -1.19
TMED3-204ENST00000543455 A0A0D9SG42 100 aa7.58□□□□□ -1.2
TMED3-204ENST00000543455 PMAIP1Q13794 54 aa7.57□□□□□ -1.2
TMED3-204ENST00000543455 KRTAP8-1Q8IUC2 63 aa7.55□□□□□ -1.2
TMED3-204ENST00000543455 K7ERS5 55 aa7.54□□□□□ -1.2
TMED3-204ENST00000543455 KRTAP4-8A0A0G2JLE6 195 aa7.53□□□□□ -1.2
TMED3-204ENST00000543455 KRTAP4-8Q9BYQ9 185 aa7.53□□□□□ -1.2
TMED3-204ENST00000543455 SPRR2EP22531 72 aa7.49□□□□□ -1.21
TMED3-204ENST00000543455 SPRR2BP35325 72 aa7.49□□□□□ -1.21
TMED3-204ENST00000543455 SPRR2AP35326 72 aa7.49□□□□□ -1.21
TMED3-204ENST00000543455 KRTAP10-7P60409 375 aaPredicted RBP7.49□□□□□ -1.21
TMED3-204ENST00000543455 KRTAP12-1P59990 96 aa7.47□□□□□ -1.21
TMED3-204ENST00000543455 KRTAP10-12P60413 245 aa7.44□□□□□ -1.22
TMED3-204ENST00000543455 LCE1AQ5T7P2 110 aa7.44□□□□□ -1.22
TMED3-204ENST00000543455 SPINT4Q6UDR6 99 aa7.43□□□□□ -1.22
TMED3-204ENST00000543455 KRTAP2-3P0C7H8 128 aa7.42□□□□□ -1.22
TMED3-204ENST00000543455 KRTAP2-4Q9BYR9 128 aa7.42□□□□□ -1.22
TMED3-204ENST00000543455 KTN1-AS1Q86SY8 53 aa7.32□□□□□ -1.24
TMED3-204ENST00000543455 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
TMED3-204ENST00000543455 SPRR2DP22532 72 aa7.24□□□□□ -1.25
TMED3-204ENST00000543455 KRTAP2-2Q9BYT5 123 aa7.18□□□□□ -1.26
TMED3-204ENST00000543455 KRTAP2-1Q9BYU5 128 aa7.18□□□□□ -1.26
TMED3-204ENST00000543455 ROMO1P60602 79 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms