RNA–Protein interactions for RNA: ENST00000541600.5

EPHA4-214, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 558 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-214ENST00000541600 MRPL34Q9BQ48 92 aaKnown RBP3.93□□□□□ -1.78
EPHA4-214ENST00000541600 KRTAP4-2Q9BYR5 136 aa3.93□□□□□ -1.78
EPHA4-214ENST00000541600 PSPHP1O15172 72 aa3.92□□□□□ -1.78
EPHA4-214ENST00000541600 Q5VV11 94 aa3.92□□□□□ -1.78
EPHA4-214ENST00000541600 ATP11AUNQ6ZP68 121 aa3.92□□□□□ -1.78
EPHA4-214ENST00000541600 KRTAP13-3Q3SY46 172 aa3.9□□□□□ -1.79
EPHA4-214ENST00000541600 LIMD2Q9BT23 127 aa3.89□□□□□ -1.79
EPHA4-214ENST00000541600 LOC101927531A0A1B0GV80 90 aa3.88□□□□□ -1.79
EPHA4-214ENST00000541600 C7orf65Q6ZTY9 151 aa3.88□□□□□ -1.79
EPHA4-214ENST00000541600 LCA10Q71F78 164 aa3.88□□□□□ -1.79
EPHA4-214ENST00000541600 CIRBP-AS1Q8TBR5 109 aa3.88□□□□□ -1.79
EPHA4-214ENST00000541600 IGHV6-1A0A0B4J1U7 121 aa3.87□□□□□ -1.79
EPHA4-214ENST00000541600 A8MUN3 132 aa3.87□□□□□ -1.79
EPHA4-214ENST00000541600 COA5Q86WW8 74 aa3.85□□□□□ -1.79
EPHA4-214ENST00000541600 CDC42SE1Q9NRR8 79 aa3.85□□□□□ -1.79
EPHA4-214ENST00000541600 ANAPC11Q9NYG5 84 aa3.85□□□□□ -1.79
EPHA4-214ENST00000541600 LPAP08519 4548 aa3.83□□□□□ -1.8
EPHA4-214ENST00000541600 A8MU10 97 aa3.83□□□□□ -1.8
EPHA4-214ENST00000541600 KRTAP1-4P0C5Y4 121 aa3.83□□□□□ -1.8
EPHA4-214ENST00000541600 KRTAP10-1P60331 282 aa3.83□□□□□ -1.8
EPHA4-214ENST00000541600 KRTAP13-2Q52LG2 175 aa3.83□□□□□ -1.8
EPHA4-214ENST00000541600 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
EPHA4-214ENST00000541600 LINC00313P59037 77 aa3.82□□□□□ -1.8
EPHA4-214ENST00000541600 RPS29P62273 56 aaKnown RBP3.82□□□□□ -1.8
EPHA4-214ENST00000541600 Q5W150 140 aa3.82□□□□□ -1.8
EPHA4-214ENST00000541600 KRTAP16-1A8MUX0 517 aa3.81□□□□□ -1.8
EPHA4-214ENST00000541600 CHKB-CPT1BH3BT56 60 aa3.81□□□□□ -1.8
EPHA4-214ENST00000541600 HRES1P13985 223 aa3.8□□□□□ -1.8
EPHA4-214ENST00000541600 PCOTHQ58A44 107 aa3.8□□□□□ -1.8
EPHA4-214ENST00000541600 Q5VSD8 79 aa3.8□□□□□ -1.8
EPHA4-214ENST00000541600 SPINK1P00995 79 aa3.79□□□□□ -1.8
EPHA4-214ENST00000541600 ACYP2P14621 99 aa3.78□□□□□ -1.8
EPHA4-214ENST00000541600 SPAG11AQ6PDA7 123 aa3.78□□□□□ -1.8
EPHA4-214ENST00000541600 SPINK6Q6UWN8 80 aa3.78□□□□□ -1.8
EPHA4-214ENST00000541600 DMAC1Q96GE9 116 aa3.78□□□□□ -1.8
EPHA4-214ENST00000541600 PRR15LQ9BU68 103 aa3.78□□□□□ -1.8
EPHA4-214ENST00000541600 SMR3BP02814 79 aaPredicted RBP3.76□□□□□ -1.81
EPHA4-214ENST00000541600 A6NED7 52 aa3.75□□□□□ -1.81
EPHA4-214ENST00000541600 SPTSSBQ8NFR3 76 aa3.75□□□□□ -1.81
EPHA4-214ENST00000541600 TYMSOSQ8TAI1 123 aa3.75□□□□□ -1.81
EPHA4-214ENST00000541600 LINC01554Q52M75 96 aa3.73□□□□□ -1.81
EPHA4-214ENST00000541600 LCE1AQ5T7P2 110 aa3.73□□□□□ -1.81
EPHA4-214ENST00000541600 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
EPHA4-214ENST00000541600 LINC00304Q8N9R0 145 aa3.7□□□□□ -1.82
EPHA4-214ENST00000541600 KRTAP10-4P60372 401 aaPredicted RBP3.69□□□□□ -1.82
EPHA4-214ENST00000541600 A8MUU9 505 aa3.68□□□□□ -1.82
EPHA4-214ENST00000541600 CAMK2N1Q7Z7J9 78 aa3.67□□□□□ -1.82
EPHA4-214ENST00000541600 C20orf166-AS1Q96NR2 134 aa3.67□□□□□ -1.82
EPHA4-214ENST00000541600 SPINK7P58062 85 aa3.66□□□□□ -1.82
EPHA4-214ENST00000541600 MT1HL1P0DM35 61 aa3.65□□□□□ -1.83
EPHA4-214ENST00000541600 SPATA8Q6RVD6 105 aa3.64□□□□□ -1.83
EPHA4-214ENST00000541600 A0A1B0GU69 56 aa3.62□□□□□ -1.83
EPHA4-214ENST00000541600 MT3P25713 68 aa3.61□□□□□ -1.83
EPHA4-214ENST00000541600 RETNLBQ9BQ08 111 aa3.61□□□□□ -1.83
EPHA4-214ENST00000541600 K7ERS5 55 aa3.59□□□□□ -1.83
EPHA4-214ENST00000541600 UQCR11O14957 56 aa3.58□□□□□ -1.84
EPHA4-214ENST00000541600 KRTAP10-8P60410 259 aa3.58□□□□□ -1.84
EPHA4-214ENST00000541600 ADM2Q7Z4H4 148 aa3.58□□□□□ -1.84
EPHA4-214ENST00000541600 MIR22HGQ0VDD5 57 aa3.55□□□□□ -1.84
EPHA4-214ENST00000541600 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
EPHA4-214ENST00000541600 MUC17Q685J3 4493 aa3.53□□□□□ -1.84
EPHA4-214ENST00000541600 COX6B2Q6YFQ2 88 aa3.53□□□□□ -1.84
EPHA4-214ENST00000541600 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
EPHA4-214ENST00000541600 C9orf92A6NGG3 77 aa3.51□□□□□ -1.85
EPHA4-214ENST00000541600 CSAG1Q6PB30 78 aa3.51□□□□□ -1.85
EPHA4-214ENST00000541600 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
EPHA4-214ENST00000541600 ROMO1P60602 79 aa3.48□□□□□ -1.85
EPHA4-214ENST00000541600 RPL37P61927 97 aaKnown RBP3.48□□□□□ -1.85
EPHA4-214ENST00000541600 USH2AO75445 5202 aa3.46□□□□□ -1.86
EPHA4-214ENST00000541600 A0A1B0GU33 70 aa3.45□□□□□ -1.86
EPHA4-214ENST00000541600 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
EPHA4-214ENST00000541600 H1FX-AS1Q4G0G2 97 aa3.45□□□□□ -1.86
EPHA4-214ENST00000541600 H0YAA0 97 aa3.43□□□□□ -1.86
EPHA4-214ENST00000541600 MACF1Q9UPN3 7388 aaKnown RBP3.41□□□□□ -1.86
EPHA4-214ENST00000541600 FCGBPQ9Y6R7 5405 aaPredicted RBP3.4□□□□□ -1.87
EPHA4-214ENST00000541600 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
EPHA4-214ENST00000541600 KRTAP10-6P60371 365 aaPredicted RBP3.38□□□□□ -1.87
EPHA4-214ENST00000541600 P0C880 135 aa3.37□□□□□ -1.87
EPHA4-214ENST00000541600 TPRXLQ17RH7 258 aa3.37□□□□□ -1.87
EPHA4-214ENST00000541600 KRTAP9-8Q9BYQ0 159 aa3.36□□□□□ -1.87
EPHA4-214ENST00000541600 KRTAP2-2Q9BYT5 123 aa3.35□□□□□ -1.87
EPHA4-214ENST00000541600 S4R3F8 94 aa3.35□□□□□ -1.87
EPHA4-214ENST00000541600 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
EPHA4-214ENST00000541600 NEBP20929 6669 aa3.33□□□□□ -1.88
EPHA4-214ENST00000541600 M0QZ58 72 aa3.27□□□□□ -1.89
EPHA4-214ENST00000541600 KRTAP13-4Q3LI77 160 aa3.27□□□□□ -1.89
EPHA4-214ENST00000541600 MUC12Q9UKN1 5478 aa3.22□□□□□ -1.89
EPHA4-214ENST00000541600 KRTAP4-1Q9BYQ7 146 aa3.21□□□□□ -1.9
EPHA4-214ENST00000541600 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
EPHA4-214ENST00000541600 FLGP20930 4061 aaPredicted RBP3.18□□□□□ -1.9
EPHA4-214ENST00000541600 A0A0D9SG42 100 aa3.16□□□□□ -1.9
EPHA4-214ENST00000541600 KRTAP12-2P59991 146 aa3.16□□□□□ -1.9
EPHA4-214ENST00000541600 KRTAP19-2Q3LHN2 52 aa3.16□□□□□ -1.9
EPHA4-214ENST00000541600 SPINT4Q6UDR6 99 aa3.15□□□□□ -1.91
EPHA4-214ENST00000541600 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
EPHA4-214ENST00000541600 MT1HP80294 61 aa3.13□□□□□ -1.91
EPHA4-214ENST00000541600 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
EPHA4-214ENST00000541600 CRIPTQ9P021 101 aa3.1□□□□□ -1.91
EPHA4-214ENST00000541600 LCE3CQ5T5A8 94 aa3.08□□□□□ -1.92
EPHA4-214ENST00000541600 R4GN34 69 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms