RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 MPLKIPQ8TAP9 179 aa7.29□□□□□ -1.24
CYB561A3-216ENST00000540755 KRTAP4-1Q9BYQ7 146 aa7.26□□□□□ -1.25
CYB561A3-216ENST00000540755 KRTAP3-1Q9BYR8 98 aa7.26□□□□□ -1.25
CYB561A3-216ENST00000540755 SPTSSBQ8NFR3 76 aa7.24□□□□□ -1.25
CYB561A3-216ENST00000540755 LINC01558Q9Y6Z2 57 aa7.24□□□□□ -1.25
CYB561A3-216ENST00000540755 RBM12B-AS1Q9P1G2 102 aa7.22□□□□□ -1.25
CYB561A3-216ENST00000540755 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
CYB561A3-216ENST00000540755 PRR15LQ9BU68 103 aa7.14□□□□□ -1.27
CYB561A3-216ENST00000540755 H1FX-AS1Q4G0G2 97 aa7.13□□□□□ -1.27
CYB561A3-216ENST00000540755 PSPHP1O15172 72 aa7.11□□□□□ -1.27
CYB561A3-216ENST00000540755 LCE2CQ5TA81 110 aa7.11□□□□□ -1.27
CYB561A3-216ENST00000540755 KRTAP19-2Q3LHN2 52 aa7.1□□□□□ -1.27
CYB561A3-216ENST00000540755 Q5VV11 94 aa7.1□□□□□ -1.27
CYB561A3-216ENST00000540755 FSIP2Q5CZC0 6907 aa7.09□□□□□ -1.27
CYB561A3-216ENST00000540755 LCE2DQ5TA82 110 aaPredicted RBP7.07□□□□□ -1.28
CYB561A3-216ENST00000540755 A0A1B0GU69 56 aa7.06□□□□□ -1.28
CYB561A3-216ENST00000540755 S4R3F8 94 aa7.06□□□□□ -1.28
CYB561A3-216ENST00000540755 SEC61GP60059 68 aa7.05□□□□□ -1.28
CYB561A3-216ENST00000540755 LCA10Q71F78 164 aa7.04□□□□□ -1.28
CYB561A3-216ENST00000540755 MT1HP80294 61 aa7.01□□□□□ -1.29
CYB561A3-216ENST00000540755 KRTAP3-3Q9BYR6 98 aa7.01□□□□□ -1.29
CYB561A3-216ENST00000540755 PRO0628Q9UI54 55 aa6.98□□□□□ -1.29
CYB561A3-216ENST00000540755 A6NED7 52 aa6.97□□□□□ -1.29
CYB561A3-216ENST00000540755 BRK1Q8WUW1 75 aa6.97□□□□□ -1.29
CYB561A3-216ENST00000540755 CRCT1Q9UGL9 99 aa6.95□□□□□ -1.3
CYB561A3-216ENST00000540755 UQCR11O14957 56 aa6.92□□□□□ -1.3
CYB561A3-216ENST00000540755 LORP23490 312 aaPredicted RBP6.92□□□□□ -1.3
CYB561A3-216ENST00000540755 CSAG1Q6PB30 78 aa6.92□□□□□ -1.3
CYB561A3-216ENST00000540755 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
CYB561A3-216ENST00000540755 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
CYB561A3-216ENST00000540755 FLGP20930 4061 aaPredicted RBP6.87□□□□□ -1.31
CYB561A3-216ENST00000540755 SPATA8Q6RVD6 105 aa6.85□□□□□ -1.31
CYB561A3-216ENST00000540755 A0A1B0GU33 70 aa6.81□□□□□ -1.32
CYB561A3-216ENST00000540755 MIR22HGQ0VDD5 57 aa6.81□□□□□ -1.32
CYB561A3-216ENST00000540755 H0YAA0 97 aa6.79□□□□□ -1.32
CYB561A3-216ENST00000540755 M0R2T5 61 aa6.77□□□□□ -1.33
CYB561A3-216ENST00000540755 SVIPQ8NHG7 77 aa6.75□□□□□ -1.33
CYB561A3-216ENST00000540755 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
CYB561A3-216ENST00000540755 ADM2Q7Z4H4 148 aa6.73□□□□□ -1.33
CYB561A3-216ENST00000540755 P0C880 135 aa6.68□□□□□ -1.34
CYB561A3-216ENST00000540755 A8MU10 97 aa6.66□□□□□ -1.34
CYB561A3-216ENST00000540755 PMAIP1Q13794 54 aa6.65□□□□□ -1.35
CYB561A3-216ENST00000540755 SSPOA2VEC9 5147 aa6.61□□□□□ -1.35
CYB561A3-216ENST00000540755 M0QZ58 72 aa6.61□□□□□ -1.35
CYB561A3-216ENST00000540755 KRTAP9-8Q9BYQ0 159 aa6.61□□□□□ -1.35
CYB561A3-216ENST00000540755 USH2AO75445 5202 aa6.6□□□□□ -1.35
CYB561A3-216ENST00000540755 K7ERS5 55 aa6.58□□□□□ -1.36
CYB561A3-216ENST00000540755 A6NN06 94 aa6.55□□□□□ -1.36
CYB561A3-216ENST00000540755 KRTAP13-4Q3LI77 160 aa6.53□□□□□ -1.36
CYB561A3-216ENST00000540755 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
CYB561A3-216ENST00000540755 CRIPTQ9P021 101 aa6.51□□□□□ -1.37
CYB561A3-216ENST00000540755 MT2AP02795 61 aa6.5□□□□□ -1.37
CYB561A3-216ENST00000540755 R4GN34 69 aa6.5□□□□□ -1.37
CYB561A3-216ENST00000540755 MT1FP04733 61 aa6.47□□□□□ -1.37
CYB561A3-216ENST00000540755 KRTAP9-7A8MTY7 169 aa6.46□□□□□ -1.38
CYB561A3-216ENST00000540755 FCGBPQ9Y6R7 5405 aaPredicted RBP6.45□□□□□ -1.38
CYB561A3-216ENST00000540755 KRTAP10-10P60014 251 aa6.43□□□□□ -1.38
CYB561A3-216ENST00000540755 KTN1-AS1Q86SY8 53 aa6.43□□□□□ -1.38
CYB561A3-216ENST00000540755 LCE2BO14633 110 aa6.42□□□□□ -1.38
CYB561A3-216ENST00000540755 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
CYB561A3-216ENST00000540755 A0A0D9SG42 100 aa6.39□□□□□ -1.39
CYB561A3-216ENST00000540755 SPRR2GQ9BYE4 73 aa6.37□□□□□ -1.39
CYB561A3-216ENST00000540755 KRTAP19-1Q8IUB9 90 aa6.36□□□□□ -1.39
CYB561A3-216ENST00000540755 LINC01554Q52M75 96 aa6.34□□□□□ -1.39
CYB561A3-216ENST00000540755 MACF1Q9UPN3 7388 aaKnown RBP6.33□□□□□ -1.4
CYB561A3-216ENST00000540755 KRTAP12-1P59990 96 aa6.31□□□□□ -1.4
CYB561A3-216ENST00000540755 SPINT4Q6UDR6 99 aa6.28□□□□□ -1.4
CYB561A3-216ENST00000540755 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
CYB561A3-216ENST00000540755 KRTAP12-2P59991 146 aa6.27□□□□□ -1.41
CYB561A3-216ENST00000540755 ROMO1P60602 79 aa6.25□□□□□ -1.41
CYB561A3-216ENST00000540755 KRTAP19-8Q3LI54 63 aa6.22□□□□□ -1.41
CYB561A3-216ENST00000540755 KRTAP19-6Q3LI70 58 aa6.22□□□□□ -1.41
CYB561A3-216ENST00000540755 PLAC4Q8WY50 150 aa6.14□□□□□ -1.43
CYB561A3-216ENST00000540755 MT1BP07438 61 aa6.11□□□□□ -1.43
CYB561A3-216ENST00000540755 CAMK2N1Q7Z7J9 78 aa6.08□□□□□ -1.44
CYB561A3-216ENST00000540755 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
CYB561A3-216ENST00000540755 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
CYB561A3-216ENST00000540755 KRTAP6-3Q3LI67 103 aa6□□□□□ -1.45
CYB561A3-216ENST00000540755 C10orf95Q9H7T3 257 aa5.96□□□□□ -1.46
CYB561A3-216ENST00000540755 NEBP20929 6669 aa5.95□□□□□ -1.46
CYB561A3-216ENST00000540755 MT1XP80297 61 aa5.9□□□□□ -1.46
CYB561A3-216ENST00000540755 KRTAP10-5P60370 271 aa5.9□□□□□ -1.47
CYB561A3-216ENST00000540755 PRO2289Q9P1D8 64 aa5.86□□□□□ -1.47
CYB561A3-216ENST00000540755 TNP1P09430 55 aa5.84□□□□□ -1.47
CYB561A3-216ENST00000540755 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
CYB561A3-216ENST00000540755 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
CYB561A3-216ENST00000540755 MUC12Q9UKN1 5478 aa5.82□□□□□ -1.48
CYB561A3-216ENST00000540755 KMT2DO14686 5537 aa5.7□□□□□ -1.5
CYB561A3-216ENST00000540755 KRTAP5-9P26371 169 aa5.69□□□□□ -1.5
CYB561A3-216ENST00000540755 KRTAP10-7P60409 375 aaPredicted RBP5.65□□□□□ -1.5
CYB561A3-216ENST00000540755 MDN1Q9NU22 5596 aa5.65□□□□□ -1.51
CYB561A3-216ENST00000540755 KRTAP20-1Q3LI63 56 aa5.64□□□□□ -1.51
CYB561A3-216ENST00000540755 KRTAP10-12P60413 245 aa5.62□□□□□ -1.51
CYB561A3-216ENST00000540755 LCE3AQ5TA76 89 aa5.54□□□□□ -1.52
CYB561A3-216ENST00000540755 KRTAP8-1Q8IUC2 63 aa5.45□□□□□ -1.54
CYB561A3-216ENST00000540755 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
CYB561A3-216ENST00000540755 KRTAP4-8A0A0G2JLE6 195 aa5.43□□□□□ -1.54
CYB561A3-216ENST00000540755 KRTAP4-8Q9BYQ9 185 aa5.43□□□□□ -1.54
CYB561A3-216ENST00000540755 KRTAP2-3P0C7H8 128 aa5.42□□□□□ -1.54
CYB561A3-216ENST00000540755 KRTAP2-4Q9BYR9 128 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms