RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 A0A087WVE0 104 aa6.35□□□□□ -1.39
CCDC130-202ENST00000540216 KRTAP3-1Q9BYR8 98 aa6.35□□□□□ -1.39
CCDC130-202ENST00000540216 S4R3F8 94 aa6.33□□□□□ -1.4
CCDC130-202ENST00000540216 H0Y9P7 68 aa6.32□□□□□ -1.4
CCDC130-202ENST00000540216 SERP1Q9Y6X1 66 aa6.32□□□□□ -1.4
CCDC130-202ENST00000540216 KLKP1Q107X0 134 aa6.31□□□□□ -1.4
CCDC130-202ENST00000540216 LCE2BO14633 110 aa6.3□□□□□ -1.4
CCDC130-202ENST00000540216 CSAG1Q6PB30 78 aa6.27□□□□□ -1.41
CCDC130-202ENST00000540216 SSPOA2VEC9 5147 aa6.27□□□□□ -1.41
CCDC130-202ENST00000540216 LCA10Q71F78 164 aa6.26□□□□□ -1.41
CCDC130-202ENST00000540216 OCR1Q9BZK8 76 aa6.26□□□□□ -1.41
CCDC130-202ENST00000540216 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
CCDC130-202ENST00000540216 USH2AO75445 5202 aa6.24□□□□□ -1.41
CCDC130-202ENST00000540216 MP68P56378 58 aa6.24□□□□□ -1.41
CCDC130-202ENST00000540216 C20orf197Q8N268 126 aa6.23□□□□□ -1.41
CCDC130-202ENST00000540216 LINC00208Q96KT6 92 aa6.22□□□□□ -1.41
CCDC130-202ENST00000540216 H7BZZ5 65 aa6.21□□□□□ -1.42
CCDC130-202ENST00000540216 A8MUN3 132 aa6.19□□□□□ -1.42
CCDC130-202ENST00000540216 H3BPC8 53 aa6.19□□□□□ -1.42
CCDC130-202ENST00000540216 KRTAP3-3Q9BYR6 98 aa6.18□□□□□ -1.42
CCDC130-202ENST00000540216 PRO0628Q9UI54 55 aa6.17□□□□□ -1.42
CCDC130-202ENST00000540216 CYSTM1Q9H1C7 97 aa6.16□□□□□ -1.42
CCDC130-202ENST00000540216 KRTAP9-7A8MTY7 169 aa6.15□□□□□ -1.42
CCDC130-202ENST00000540216 KRTAP19-1Q8IUB9 90 aa6.15□□□□□ -1.42
CCDC130-202ENST00000540216 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.14□□□□□ -1.43
CCDC130-202ENST00000540216 FCGBPQ9Y6R7 5405 aaPredicted RBP6.13□□□□□ -1.43
CCDC130-202ENST00000540216 KRTAP19-6Q3LI70 58 aa6.1□□□□□ -1.43
CCDC130-202ENST00000540216 H0YAA0 97 aa6.06□□□□□ -1.44
CCDC130-202ENST00000540216 SPRR2GQ9BYE4 73 aa6.06□□□□□ -1.44
CCDC130-202ENST00000540216 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
CCDC130-202ENST00000540216 SNURFQ9Y675 71 aa6.05□□□□□ -1.44
CCDC130-202ENST00000540216 V9GYY9 64 aa6.05□□□□□ -1.44
CCDC130-202ENST00000540216 DMAC1Q96GE9 116 aa6.04□□□□□ -1.44
CCDC130-202ENST00000540216 SYNE2Q8WXH0 6885 aaKnown RBP6.03□□□□□ -1.44
CCDC130-202ENST00000540216 KRTAP19-8Q3LI54 63 aa6□□□□□ -1.45
CCDC130-202ENST00000540216 Q5VV11 94 aa6□□□□□ -1.45
CCDC130-202ENST00000540216 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
CCDC130-202ENST00000540216 Q1T7F1 81 aa5.98□□□□□ -1.45
CCDC130-202ENST00000540216 MT1BP07438 61 aa5.96□□□□□ -1.46
CCDC130-202ENST00000540216 ADM2Q7Z4H4 148 aa5.94□□□□□ -1.46
CCDC130-202ENST00000540216 SPANXA2-OT1Q8N9U9 137 aa5.94□□□□□ -1.46
CCDC130-202ENST00000540216 BRK1Q8WUW1 75 aa5.92□□□□□ -1.46
CCDC130-202ENST00000540216 ACYP2P14621 99 aa5.91□□□□□ -1.46
CCDC130-202ENST00000540216 A6NN06 94 aa5.86□□□□□ -1.47
CCDC130-202ENST00000540216 SPTSSBQ8NFR3 76 aa5.85□□□□□ -1.47
CCDC130-202ENST00000540216 KRTAP10-5P60370 271 aa5.82□□□□□ -1.48
CCDC130-202ENST00000540216 P0C880 135 aa5.81□□□□□ -1.48
CCDC130-202ENST00000540216 R4GN34 69 aa5.81□□□□□ -1.48
CCDC130-202ENST00000540216 CHKB-CPT1BH3BT56 60 aa5.8□□□□□ -1.48
CCDC130-202ENST00000540216 KRTAP3-2Q9BYR7 98 aa5.79□□□□□ -1.48
CCDC130-202ENST00000540216 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
CCDC130-202ENST00000540216 M0QZ58 72 aa5.76□□□□□ -1.49
CCDC130-202ENST00000540216 NEBP20929 6669 aa5.73□□□□□ -1.49
CCDC130-202ENST00000540216 SEC61GP60059 68 aa5.73□□□□□ -1.49
CCDC130-202ENST00000540216 KRTAP6-3Q3LI67 103 aa5.72□□□□□ -1.49
CCDC130-202ENST00000540216 PLAC4Q8WY50 150 aa5.72□□□□□ -1.49
CCDC130-202ENST00000540216 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
CCDC130-202ENST00000540216 PSPHP1O15172 72 aa5.68□□□□□ -1.5
CCDC130-202ENST00000540216 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
CCDC130-202ENST00000540216 COA5Q86WW8 74 aa5.65□□□□□ -1.5
CCDC130-202ENST00000540216 LINC01554Q52M75 96 aa5.64□□□□□ -1.51
CCDC130-202ENST00000540216 PRR15LQ9BU68 103 aa5.64□□□□□ -1.51
CCDC130-202ENST00000540216 CDC42SE1Q9NRR8 79 aa5.64□□□□□ -1.51
CCDC130-202ENST00000540216 MT1XP80297 61 aa5.63□□□□□ -1.51
CCDC130-202ENST00000540216 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
CCDC130-202ENST00000540216 MUC12Q9UKN1 5478 aa5.61□□□□□ -1.51
CCDC130-202ENST00000540216 A6NED7 52 aa5.61□□□□□ -1.51
CCDC130-202ENST00000540216 KRTAP5-9P26371 169 aa5.52□□□□□ -1.53
CCDC130-202ENST00000540216 KRTAP12-2P59991 146 aa5.5□□□□□ -1.53
CCDC130-202ENST00000540216 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
CCDC130-202ENST00000540216 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
CCDC130-202ENST00000540216 A0A1B0GU33 70 aa5.39□□□□□ -1.55
CCDC130-202ENST00000540216 A0A1B0GU69 56 aa5.39□□□□□ -1.55
CCDC130-202ENST00000540216 KRTAP8-1Q8IUC2 63 aa5.39□□□□□ -1.55
CCDC130-202ENST00000540216 SPATA8Q6RVD6 105 aa5.38□□□□□ -1.55
CCDC130-202ENST00000540216 KMT2DO14686 5537 aa5.38□□□□□ -1.55
CCDC130-202ENST00000540216 UQCR11O14957 56 aa5.37□□□□□ -1.55
CCDC130-202ENST00000540216 KRTAP10-12P60413 245 aa5.36□□□□□ -1.55
CCDC130-202ENST00000540216 CAMK2N1Q7Z7J9 78 aa5.36□□□□□ -1.55
CCDC130-202ENST00000540216 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
CCDC130-202ENST00000540216 KRTAP10-7P60409 375 aaPredicted RBP5.35□□□□□ -1.55
CCDC130-202ENST00000540216 A8MU10 97 aa5.33□□□□□ -1.56
CCDC130-202ENST00000540216 A0A0D9SG42 100 aa5.32□□□□□ -1.56
CCDC130-202ENST00000540216 KRTAP20-1Q3LI63 56 aa5.32□□□□□ -1.56
CCDC130-202ENST00000540216 KRTAP4-8A0A0G2JLE6 195 aa5.31□□□□□ -1.56
CCDC130-202ENST00000540216 KRTAP4-8Q9BYQ9 185 aa5.31□□□□□ -1.56
CCDC130-202ENST00000540216 MIR22HGQ0VDD5 57 aa5.3□□□□□ -1.56
CCDC130-202ENST00000540216 SPRR2EP22531 72 aa5.25□□□□□ -1.57
CCDC130-202ENST00000540216 SPRR2BP35325 72 aa5.25□□□□□ -1.57
CCDC130-202ENST00000540216 SPRR2AP35326 72 aa5.25□□□□□ -1.57
CCDC130-202ENST00000540216 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
CCDC130-202ENST00000540216 SPINT4Q6UDR6 99 aa5.24□□□□□ -1.57
CCDC130-202ENST00000540216 LCE1AQ5T7P2 110 aa5.2□□□□□ -1.58
CCDC130-202ENST00000540216 K7ERS5 55 aa5.13□□□□□ -1.59
CCDC130-202ENST00000540216 KRTAP2-3P0C7H8 128 aa5.13□□□□□ -1.59
CCDC130-202ENST00000540216 KRTAP2-4Q9BYR9 128 aa5.13□□□□□ -1.59
CCDC130-202ENST00000540216 SPRR2DP22532 72 aa5.08□□□□□ -1.6
CCDC130-202ENST00000540216 PRAC1Q96KF2 57 aa5.06□□□□□ -1.6
CCDC130-202ENST00000540216 KRTAP19-7Q3SYF9 63 aa5.02□□□□□ -1.61
CCDC130-202ENST00000540216 TNP1P09430 55 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 157.4 ms