RNA–Protein interactions for RNA: ENST00000539873.1

SLC13A1-204, Transcript of solute carrier family 13 member 1, humanhuman

TSL 5 BASIC

Gene SLC13A1, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A1-204ENST00000539873 SPACA4Q8TDM5 124 aa4.19□□□□□ -1.74
SLC13A1-204ENST00000539873 DNAH8Q96JB1 4490 aa4.18□□□□□ -1.74
SLC13A1-204ENST00000539873 Q8N1X5 172 aa4.18□□□□□ -1.74
SLC13A1-204ENST00000539873 LRP1BQ9NZR2 4599 aa4.18□□□□□ -1.74
SLC13A1-204ENST00000539873 XP32Q5T750 250 aa4.18□□□□□ -1.74
SLC13A1-204ENST00000539873 KRTAP23-1A1A580 65 aa4.17□□□□□ -1.74
SLC13A1-204ENST00000539873 SPINK6Q6UWN8 80 aa4.17□□□□□ -1.74
SLC13A1-204ENST00000539873 KRTAP13-1Q8IUC0 172 aa4.17□□□□□ -1.74
SLC13A1-204ENST00000539873 APOBP04114 4563 aaKnown RBP4.16□□□□□ -1.74
SLC13A1-204ENST00000539873 KRTAP10-2P60368 255 aa4.15□□□□□ -1.74
SLC13A1-204ENST00000539873 R4GN34 69 aa4.15□□□□□ -1.75
SLC13A1-204ENST00000539873 HERC2O95714 4834 aa4.15□□□□□ -1.75
SLC13A1-204ENST00000539873 PKHD1P08F94 4074 aa4.14□□□□□ -1.75
SLC13A1-204ENST00000539873 HSPG2P98160 4391 aa4.13□□□□□ -1.75
SLC13A1-204ENST00000539873 RYR1P21817 5038 aa4.1□□□□□ -1.75
SLC13A1-204ENST00000539873 KRTAP10-1P60331 282 aa4.1□□□□□ -1.75
SLC13A1-204ENST00000539873 KRTAP17-1Q9BYP8 105 aa4.1□□□□□ -1.75
SLC13A1-204ENST00000539873 S4R3F8 94 aa4.1□□□□□ -1.75
SLC13A1-204ENST00000539873 SRRM2Q9UQ35 2752 aaKnown RBP4.1□□□□□ -1.75
SLC13A1-204ENST00000539873 KIAA1109Q2LD37 5005 aa4.09□□□□□ -1.75
SLC13A1-204ENST00000539873 INE1O15225 51 aa4.06□□□□□ -1.76
SLC13A1-204ENST00000539873 A0A0D9SG42 100 aa4.06□□□□□ -1.76
SLC13A1-204ENST00000539873 KRTAP4-5Q9BYR2 181 aa4.05□□□□□ -1.76
SLC13A1-204ENST00000539873 KRTAP13-4Q3LI77 160 aa4.04□□□□□ -1.76
SLC13A1-204ENST00000539873 FAT1Q14517 4588 aa4.04□□□□□ -1.76
SLC13A1-204ENST00000539873 PKHD1L1Q86WI1 4243 aa4.03□□□□□ -1.76
SLC13A1-204ENST00000539873 VPS13BQ7Z7G8 4022 aa4.02□□□□□ -1.77
SLC13A1-204ENST00000539873 KRTAP10-6P60371 365 aaPredicted RBP4.01□□□□□ -1.77
SLC13A1-204ENST00000539873 LCE2BO14633 110 aa4□□□□□ -1.77
SLC13A1-204ENST00000539873 SMR3BP02814 79 aaPredicted RBP3.99□□□□□ -1.77
SLC13A1-204ENST00000539873 KRTAP12-2P59991 146 aa3.99□□□□□ -1.77
SLC13A1-204ENST00000539873 KRTAP10-8P60410 259 aa3.98□□□□□ -1.77
SLC13A1-204ENST00000539873 Q5VSD8 79 aa3.98□□□□□ -1.77
SLC13A1-204ENST00000539873 KRTAP3-1Q9BYR8 98 aa3.98□□□□□ -1.77
SLC13A1-204ENST00000539873 KRTAP10-4P60372 401 aaPredicted RBP3.97□□□□□ -1.77
SLC13A1-204ENST00000539873 PCLOQ9Y6V0 5065 aa3.95□□□□□ -1.78
SLC13A1-204ENST00000539873 ABCA13Q86UQ4 5058 aa3.94□□□□□ -1.78
SLC13A1-204ENST00000539873 KRTAP12-1P59990 96 aa3.94□□□□□ -1.78
SLC13A1-204ENST00000539873 KRTAP4-8Q9BYQ9 185 aa3.93□□□□□ -1.78
SLC13A1-204ENST00000539873 MYCBP2O75592 4640 aa3.92□□□□□ -1.78
SLC13A1-204ENST00000539873 FAT3Q8TDW7 4589 aa3.92□□□□□ -1.78
SLC13A1-204ENST00000539873 DMBT1Q9UGM3 2413 aaPredicted RBP3.89□□□□□ -1.79
SLC13A1-204ENST00000539873 SPRR5A0A1B0GTR4 108 aa3.87□□□□□ -1.79
SLC13A1-204ENST00000539873 LCE2CQ5TA81 110 aa3.87□□□□□ -1.79
SLC13A1-204ENST00000539873 PP632Q6XCG6 107 aa3.87□□□□□ -1.79
SLC13A1-204ENST00000539873 LRP1Q07954 4544 aaKnown RBP3.84□□□□□ -1.79
SLC13A1-204ENST00000539873 MT1HL1P0DM35 61 aa3.82□□□□□ -1.8
SLC13A1-204ENST00000539873 LCE2AQ5TA79 106 aaPredicted RBP3.82□□□□□ -1.8
SLC13A1-204ENST00000539873 TNXBP22105 4242 aa3.81□□□□□ -1.8
SLC13A1-204ENST00000539873 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.8□□□□□ -1.8
SLC13A1-204ENST00000539873 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
SLC13A1-204ENST00000539873 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
SLC13A1-204ENST00000539873 M0QZ58 72 aa3.76□□□□□ -1.81
SLC13A1-204ENST00000539873 KRTAP1-4P0C5Y4 121 aa3.75□□□□□ -1.81
SLC13A1-204ENST00000539873 HERC1Q15751 4861 aa3.74□□□□□ -1.81
SLC13A1-204ENST00000539873 KRTAP4-8A0A0G2JLE6 195 aa3.74□□□□□ -1.81
SLC13A1-204ENST00000539873 LCE3BQ5TA77 95 aa3.71□□□□□ -1.82
SLC13A1-204ENST00000539873 KRTAP13-2Q52LG2 175 aa3.69□□□□□ -1.82
SLC13A1-204ENST00000539873 HMCN2Q8NDA2 5059 aa3.68□□□□□ -1.82
SLC13A1-204ENST00000539873 KRTAP4-7Q9BYR0 210 aa3.67□□□□□ -1.82
SLC13A1-204ENST00000539873 LORP23490 312 aaPredicted RBP3.66□□□□□ -1.82
SLC13A1-204ENST00000539873 RPS29P62273 56 aaKnown RBP3.6□□□□□ -1.83
SLC13A1-204ENST00000539873 KRTAP9-8Q9BYQ0 159 aa3.6□□□□□ -1.83
SLC13A1-204ENST00000539873 KRTAP9-9Q9BYP9 154 aa3.59□□□□□ -1.83
SLC13A1-204ENST00000539873 KRTAP9-4Q9BYQ2 154 aa3.59□□□□□ -1.83
SLC13A1-204ENST00000539873 MUC17Q685J3 4493 aa3.58□□□□□ -1.84
SLC13A1-204ENST00000539873 KRTAP5-3Q6L8H2 238 aa3.58□□□□□ -1.84
SLC13A1-204ENST00000539873 LPAP08519 4548 aa3.57□□□□□ -1.84
SLC13A1-204ENST00000539873 LRP2P98164 4655 aa3.56□□□□□ -1.84
SLC13A1-204ENST00000539873 C9orf92A6NGG3 77 aa3.51□□□□□ -1.85
SLC13A1-204ENST00000539873 UBR4Q5T4S7 5183 aa3.48□□□□□ -1.85
SLC13A1-204ENST00000539873 LCE1DQ5T752 114 aa3.47□□□□□ -1.85
SLC13A1-204ENST00000539873 KRTAP4-12Q9BQ66 201 aa3.47□□□□□ -1.85
SLC13A1-204ENST00000539873 KRTAP4-2Q9BYR5 136 aa3.47□□□□□ -1.85
SLC13A1-204ENST00000539873 KRTAP4-9Q9BYQ8 210 aa3.44□□□□□ -1.86
SLC13A1-204ENST00000539873 RNF213Q63HN8 5207 aa3.44□□□□□ -1.86
SLC13A1-204ENST00000539873 KRTAP4-1Q9BYQ7 146 aa3.4□□□□□ -1.87
SLC13A1-204ENST00000539873 TNP1P09430 55 aa3.36□□□□□ -1.87
SLC13A1-204ENST00000539873 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
SLC13A1-204ENST00000539873 KRTAP10-10P60014 251 aa3.32□□□□□ -1.88
SLC13A1-204ENST00000539873 KRTAP19-2Q3LHN2 52 aa3.31□□□□□ -1.88
SLC13A1-204ENST00000539873 MUC2Q02817 5179 aa3.25□□□□□ -1.89
SLC13A1-204ENST00000539873 MT1HP80294 61 aa3.23□□□□□ -1.89
SLC13A1-204ENST00000539873 FLGP20930 4061 aaPredicted RBP3.2□□□□□ -1.9
SLC13A1-204ENST00000539873 KRTAP4-11Q9BYQ6 195 aa3.2□□□□□ -1.9
SLC13A1-204ENST00000539873 KRTAP19-1Q8IUB9 90 aa3.17□□□□□ -1.9
SLC13A1-204ENST00000539873 M0R2T5 61 aa3.11□□□□□ -1.91
SLC13A1-204ENST00000539873 KRTAP2-2Q9BYT5 123 aa3.08□□□□□ -1.92
SLC13A1-204ENST00000539873 KRTAP10-12P60413 245 aa3.05□□□□□ -1.92
SLC13A1-204ENST00000539873 MT2AP02795 61 aa3.04□□□□□ -1.92
SLC13A1-204ENST00000539873 LCE3AQ5TA76 89 aa3.02□□□□□ -1.93
SLC13A1-204ENST00000539873 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
SLC13A1-204ENST00000539873 MT1FP04733 61 aa3.01□□□□□ -1.93
SLC13A1-204ENST00000539873 CRCT1Q9UGL9 99 aa3□□□□□ -1.93
SLC13A1-204ENST00000539873 KRTAP9-3Q9BYQ3 159 aa2.98□□□□□ -1.93
SLC13A1-204ENST00000539873 KRTAP2-3P0C7H8 128 aa2.94□□□□□ -1.94
SLC13A1-204ENST00000539873 KRTAP2-4Q9BYR9 128 aa2.94□□□□□ -1.94
SLC13A1-204ENST00000539873 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
SLC13A1-204ENST00000539873 KRTAP10-5P60370 271 aa2.89□□□□□ -1.95
SLC13A1-204ENST00000539873 USH2AO75445 5202 aa2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms