RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 SPTSSBQ8NFR3 76 aa10.6□□□□□ -0.71
PACSIN3-211ENST00000539589 LCA10Q71F78 164 aa10.58□□□□□ -0.72
PACSIN3-211ENST00000539589 A8MU10 97 aa10.58□□□□□ -0.72
PACSIN3-211ENST00000539589 COX6B2Q6YFQ2 88 aa10.58□□□□□ -0.72
PACSIN3-211ENST00000539589 CDC42SE1Q9NRR8 79 aa10.57□□□□□ -0.72
PACSIN3-211ENST00000539589 HMCN2Q8NDA2 5059 aa10.52□□□□□ -0.72
PACSIN3-211ENST00000539589 SEC61GP60059 68 aa10.46□□□□□ -0.74
PACSIN3-211ENST00000539589 MUC17Q685J3 4493 aa10.45□□□□□ -0.74
PACSIN3-211ENST00000539589 UQCR11O14957 56 aa10.4□□□□□ -0.74
PACSIN3-211ENST00000539589 PMAIP1Q13794 54 aa10.37□□□□□ -0.75
PACSIN3-211ENST00000539589 SPATA8Q6RVD6 105 aa10.34□□□□□ -0.75
PACSIN3-211ENST00000539589 MIR22HGQ0VDD5 57 aa10.32□□□□□ -0.76
PACSIN3-211ENST00000539589 SEC61BP60468 96 aaKnown RBP10.26□□□□□ -0.77
PACSIN3-211ENST00000539589 KRTAP4-1Q9BYQ7 146 aa10.23□□□□□ -0.77
PACSIN3-211ENST00000539589 S4R3F8 94 aa10.23□□□□□ -0.77
PACSIN3-211ENST00000539589 A6NN06 94 aa10.21□□□□□ -0.78
PACSIN3-211ENST00000539589 KRTAP3-3Q9BYR6 98 aa10.21□□□□□ -0.78
PACSIN3-211ENST00000539589 H1FX-AS1Q4G0G2 97 aa10.19□□□□□ -0.78
PACSIN3-211ENST00000539589 A0A1B0GU33 70 aa10.17□□□□□ -0.78
PACSIN3-211ENST00000539589 RBM12B-AS1Q9P1G2 102 aa10.16□□□□□ -0.78
PACSIN3-211ENST00000539589 MUC2Q02817 5179 aa10.12□□□□□ -0.79
PACSIN3-211ENST00000539589 H0YAA0 97 aa10.09□□□□□ -0.79
PACSIN3-211ENST00000539589 KTN1-AS1Q86SY8 53 aa10.05□□□□□ -0.8
PACSIN3-211ENST00000539589 UBR4Q5T4S7 5183 aa10□□□□□ -0.81
PACSIN3-211ENST00000539589 KRTAP10-6P60371 365 aaPredicted RBP10□□□□□ -0.81
PACSIN3-211ENST00000539589 RNF213Q63HN8 5207 aa9.97□□□□□ -0.81
PACSIN3-211ENST00000539589 KRTAP3-2Q9BYR7 98 aa9.96□□□□□ -0.81
PACSIN3-211ENST00000539589 KRTAP19-2Q3LHN2 52 aa9.95□□□□□ -0.82
PACSIN3-211ENST00000539589 CSAG1Q6PB30 78 aa9.95□□□□□ -0.82
PACSIN3-211ENST00000539589 FLGP20930 4061 aaPredicted RBP9.85□□□□□ -0.83
PACSIN3-211ENST00000539589 P0C880 135 aa9.85□□□□□ -0.83
PACSIN3-211ENST00000539589 ADM2Q7Z4H4 148 aa9.85□□□□□ -0.83
PACSIN3-211ENST00000539589 KRTAP13-4Q3LI77 160 aa9.79□□□□□ -0.84
PACSIN3-211ENST00000539589 K7ERS5 55 aa9.78□□□□□ -0.84
PACSIN3-211ENST00000539589 FAT4Q6V0I7 4981 aa9.75□□□□□ -0.85
PACSIN3-211ENST00000539589 A0A0D9SG42 100 aa9.7□□□□□ -0.86
PACSIN3-211ENST00000539589 LCE2CQ5TA81 110 aa9.7□□□□□ -0.86
PACSIN3-211ENST00000539589 PRAC1Q96KF2 57 aa9.66□□□□□ -0.86
PACSIN3-211ENST00000539589 M0QZ58 72 aa9.63□□□□□ -0.87
PACSIN3-211ENST00000539589 R4GN34 69 aa9.46□□□□□ -0.89
PACSIN3-211ENST00000539589 KRTAP12-2P59991 146 aa9.46□□□□□ -0.9
PACSIN3-211ENST00000539589 MT1HP80294 61 aa9.46□□□□□ -0.9
PACSIN3-211ENST00000539589 KRTAP12-1P59990 96 aa9.44□□□□□ -0.9
PACSIN3-211ENST00000539589 ROMO1P60602 79 aa9.44□□□□□ -0.9
PACSIN3-211ENST00000539589 SPINT4Q6UDR6 99 aa9.43□□□□□ -0.9
PACSIN3-211ENST00000539589 LORP23490 312 aaPredicted RBP9.35□□□□□ -0.91
PACSIN3-211ENST00000539589 LINC01554Q52M75 96 aa9.34□□□□□ -0.91
PACSIN3-211ENST00000539589 KRTAP25-1Q3LHN0 102 aa9.31□□□□□ -0.92
PACSIN3-211ENST00000539589 M0R2T5 61 aa9.29□□□□□ -0.92
PACSIN3-211ENST00000539589 CRIPTQ9P021 101 aa9.22□□□□□ -0.93
PACSIN3-211ENST00000539589 KRTAP9-8Q9BYQ0 159 aa9.14□□□□□ -0.95
PACSIN3-211ENST00000539589 MT2AP02795 61 aa9.09□□□□□ -0.95
PACSIN3-211ENST00000539589 LCE2AQ5TA79 106 aaPredicted RBP9.09□□□□□ -0.95
PACSIN3-211ENST00000539589 MT1FP04733 61 aa9.06□□□□□ -0.96
PACSIN3-211ENST00000539589 C10orf95Q9H7T3 257 aa8.98□□□□□ -0.97
PACSIN3-211ENST00000539589 KRTAP10-10P60014 251 aa8.97□□□□□ -0.97
PACSIN3-211ENST00000539589 CAMK2N1Q7Z7J9 78 aa8.93□□□□□ -0.98
PACSIN3-211ENST00000539589 KRTAP19-1Q8IUB9 90 aa8.91□□□□□ -0.98
PACSIN3-211ENST00000539589 SPRR2GQ9BYE4 73 aa8.88□□□□□ -0.99
PACSIN3-211ENST00000539589 KRTAP9-3Q9BYQ3 159 aa8.8□□□□□ -1
PACSIN3-211ENST00000539589 PLAC4Q8WY50 150 aa8.71□□□□□ -1.02
PACSIN3-211ENST00000539589 KRTAP19-8Q3LI54 63 aa8.66□□□□□ -1.02
PACSIN3-211ENST00000539589 MT1BP07438 61 aa8.59□□□□□ -1.03
PACSIN3-211ENST00000539589 LCE2BO14633 110 aa8.58□□□□□ -1.04
PACSIN3-211ENST00000539589 TNP1P09430 55 aa8.56□□□□□ -1.04
PACSIN3-211ENST00000539589 PP632Q6XCG6 107 aa8.56□□□□□ -1.04
PACSIN3-211ENST00000539589 USH2AO75445 5202 aa8.47□□□□□ -1.05
PACSIN3-211ENST00000539589 KRTAP23-1A1A580 65 aa8.41□□□□□ -1.06
PACSIN3-211ENST00000539589 KRTAP15-1Q3LI76 137 aa8.36□□□□□ -1.07
PACSIN3-211ENST00000539589 MT1XP80297 61 aa8.3□□□□□ -1.08
PACSIN3-211ENST00000539589 KRTAP10-5P60370 271 aa8.29□□□□□ -1.08
PACSIN3-211ENST00000539589 SSPOA2VEC9 5147 aa8.22□□□□□ -1.09
PACSIN3-211ENST00000539589 LCE2DQ5TA82 110 aaPredicted RBP8.19□□□□□ -1.1
PACSIN3-211ENST00000539589 H3BS24 57 aa8.14□□□□□ -1.11
PACSIN3-211ENST00000539589 LCE3AQ5TA76 89 aa8.11□□□□□ -1.11
PACSIN3-211ENST00000539589 PRO2289Q9P1D8 64 aa8.1□□□□□ -1.11
PACSIN3-211ENST00000539589 FSIP2Q5CZC0 6907 aa8.06□□□□□ -1.12
PACSIN3-211ENST00000539589 KRTAP10-7P60409 375 aaPredicted RBP7.99□□□□□ -1.13
PACSIN3-211ENST00000539589 KRTAP19-6Q3LI70 58 aa7.98□□□□□ -1.13
PACSIN3-211ENST00000539589 KRTAP10-12P60413 245 aa7.98□□□□□ -1.13
PACSIN3-211ENST00000539589 NDUFAF8A1L188 74 aa7.95□□□□□ -1.14
PACSIN3-211ENST00000539589 KRTAP8-1Q8IUC2 63 aa7.95□□□□□ -1.14
PACSIN3-211ENST00000539589 KRTAP9-2Q9BYQ4 174 aa7.89□□□□□ -1.15
PACSIN3-211ENST00000539589 KMT2DO14686 5537 aa7.85□□□□□ -1.15
PACSIN3-211ENST00000539589 FCGBPQ9Y6R7 5405 aaPredicted RBP7.81□□□□□ -1.16
PACSIN3-211ENST00000539589 LUZP6Q538Z0 58 aa7.79□□□□□ -1.16
PACSIN3-211ENST00000539589 KRTAP12-3P60328 96 aa7.78□□□□□ -1.16
PACSIN3-211ENST00000539589 SPRR5A0A1B0GTR4 108 aa7.76□□□□□ -1.17
PACSIN3-211ENST00000539589 KRTAP4-8A0A0G2JLE6 195 aa7.71□□□□□ -1.18
PACSIN3-211ENST00000539589 KRTAP4-8Q9BYQ9 185 aa7.71□□□□□ -1.18
PACSIN3-211ENST00000539589 CRCT1Q9UGL9 99 aa7.6□□□□□ -1.19
PACSIN3-211ENST00000539589 KRTAP19-5Q3LI72 72 aa7.56□□□□□ -1.2
PACSIN3-211ENST00000539589 KRTAP19-7Q3SYF9 63 aa7.42□□□□□ -1.22
PACSIN3-211ENST00000539589 MACF1Q9UPN3 7388 aaKnown RBP7.39□□□□□ -1.23
PACSIN3-211ENST00000539589 LCE3CQ5T5A8 94 aa7.3□□□□□ -1.24
PACSIN3-211ENST00000539589 MT1EP04732 61 aa7.26□□□□□ -1.25
PACSIN3-211ENST00000539589 KRTAP9-6A0A140TA67 174 aa7.23□□□□□ -1.25
PACSIN3-211ENST00000539589 MUC12Q9UKN1 5478 aa7.23□□□□□ -1.25
PACSIN3-211ENST00000539589 A0A0A0MQY5 61 aa7.22□□□□□ -1.25
PACSIN3-211ENST00000539589 SYNE2Q8WXH0 6885 aaKnown RBP7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms