RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 COX7CP15954 63 aa6.42□□□□□ -1.38
SMARCA4-206ENST00000538456 TP53AIP1Q9HCN2 124 aa6.41□□□□□ -1.38
SMARCA4-206ENST00000538456 UQCRQO14949 82 aa6.39□□□□□ -1.39
SMARCA4-206ENST00000538456 KMT2DO14686 5537 aa6.39□□□□□ -1.39
SMARCA4-206ENST00000538456 NDUFS5O43920 106 aa6.38□□□□□ -1.39
SMARCA4-206ENST00000538456 MT1BP07438 61 aa6.37□□□□□ -1.39
SMARCA4-206ENST00000538456 C5orf47Q569G3 176 aa6.35□□□□□ -1.39
SMARCA4-206ENST00000538456 Q5VV11 94 aa6.35□□□□□ -1.39
SMARCA4-206ENST00000538456 IGKV2D-30A0A075B6S6 120 aa6.34□□□□□ -1.39
SMARCA4-206ENST00000538456 CCDC179H3BU77 68 aa6.34□□□□□ -1.39
SMARCA4-206ENST00000538456 IGKV2-30P06310 120 aa6.34□□□□□ -1.39
SMARCA4-206ENST00000538456 TRAV22A0A0B4J277 110 aa6.33□□□□□ -1.4
SMARCA4-206ENST00000538456 KRTAP5-9P26371 169 aa6.33□□□□□ -1.4
SMARCA4-206ENST00000538456 H0Y9P7 68 aa6.32□□□□□ -1.4
SMARCA4-206ENST00000538456 MP68P56378 58 aa6.32□□□□□ -1.4
SMARCA4-206ENST00000538456 H3BPC8 53 aa6.31□□□□□ -1.4
SMARCA4-206ENST00000538456 C20orf197Q8N268 126 aa6.31□□□□□ -1.4
SMARCA4-206ENST00000538456 KRTAP10-5P60370 271 aa6.3□□□□□ -1.4
SMARCA4-206ENST00000538456 KLKP1Q107X0 134 aa6.3□□□□□ -1.4
SMARCA4-206ENST00000538456 Q5W150 140 aa6.28□□□□□ -1.4
SMARCA4-206ENST00000538456 C7orf65Q6ZTY9 151 aa6.28□□□□□ -1.4
SMARCA4-206ENST00000538456 KRTAP19-8Q3LI54 63 aa6.27□□□□□ -1.41
SMARCA4-206ENST00000538456 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
SMARCA4-206ENST00000538456 LINC00208Q96KT6 92 aa6.26□□□□□ -1.41
SMARCA4-206ENST00000538456 SNURFQ9Y675 71 aa6.26□□□□□ -1.41
SMARCA4-206ENST00000538456 SPRR2GQ9BYE4 73 aa6.25□□□□□ -1.41
SMARCA4-206ENST00000538456 C1orf64Q8NEQ6 169 aa6.24□□□□□ -1.41
SMARCA4-206ENST00000538456 LOC101927531A0A1B0GV80 90 aa6.23□□□□□ -1.41
SMARCA4-206ENST00000538456 NDUFC1O43677 76 aa6.23□□□□□ -1.41
SMARCA4-206ENST00000538456 KRTAP2-3P0C7H8 128 aa6.22□□□□□ -1.41
SMARCA4-206ENST00000538456 KRTAP2-4Q9BYR9 128 aa6.22□□□□□ -1.41
SMARCA4-206ENST00000538456 CYSTM1Q9H1C7 97 aa6.22□□□□□ -1.41
SMARCA4-206ENST00000538456 H7BZZ5 65 aa6.19□□□□□ -1.42
SMARCA4-206ENST00000538456 S4R3F8 94 aa6.18□□□□□ -1.42
SMARCA4-206ENST00000538456 CYP4F30PQ9H0H9 118 aa6.17□□□□□ -1.42
SMARCA4-206ENST00000538456 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
SMARCA4-206ENST00000538456 TMEM258P61165 79 aa6.15□□□□□ -1.42
SMARCA4-206ENST00000538456 LCA10Q71F78 164 aa6.14□□□□□ -1.43
SMARCA4-206ENST00000538456 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
SMARCA4-206ENST00000538456 SPRR2EP22531 72 aa6.11□□□□□ -1.43
SMARCA4-206ENST00000538456 SPRR2BP35325 72 aa6.11□□□□□ -1.43
SMARCA4-206ENST00000538456 SPRR2AP35326 72 aa6.11□□□□□ -1.43
SMARCA4-206ENST00000538456 SPANXA2-OT1Q8N9U9 137 aa6.11□□□□□ -1.43
SMARCA4-206ENST00000538456 ATP5EP56381 51 aaPredicted RBP6.1□□□□□ -1.43
SMARCA4-206ENST00000538456 SPRR2FQ96RM1 72 aa6.1□□□□□ -1.43
SMARCA4-206ENST00000538456 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
SMARCA4-206ENST00000538456 KRTAP2-2Q9BYT5 123 aa5.99□□□□□ -1.45
SMARCA4-206ENST00000538456 KRTAP2-1Q9BYU5 128 aa5.99□□□□□ -1.45
SMARCA4-206ENST00000538456 CRIPTQ9P021 101 aa5.99□□□□□ -1.45
SMARCA4-206ENST00000538456 A8MUN3 132 aa5.96□□□□□ -1.46
SMARCA4-206ENST00000538456 SERP1Q9Y6X1 66 aa5.95□□□□□ -1.46
SMARCA4-206ENST00000538456 LCE1AQ5T7P2 110 aa5.94□□□□□ -1.46
SMARCA4-206ENST00000538456 KRTAP8-1Q8IUC2 63 aa5.94□□□□□ -1.46
SMARCA4-206ENST00000538456 ACYP2P14621 99 aa5.93□□□□□ -1.46
SMARCA4-206ENST00000538456 SPRR2DP22532 72 aa5.91□□□□□ -1.46
SMARCA4-206ENST00000538456 RPS28P62857 69 aaKnown RBP5.91□□□□□ -1.46
SMARCA4-206ENST00000538456 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
SMARCA4-206ENST00000538456 COA5Q86WW8 74 aa5.9□□□□□ -1.46
SMARCA4-206ENST00000538456 MT1XP80297 61 aa5.88□□□□□ -1.47
SMARCA4-206ENST00000538456 GPR98Q8WXG9 6306 aa5.83□□□□□ -1.48
SMARCA4-206ENST00000538456 CHKB-CPT1BH3BT56 60 aa5.82□□□□□ -1.48
SMARCA4-206ENST00000538456 SMIM26A0A096LP01 95 aa5.78□□□□□ -1.48
SMARCA4-206ENST00000538456 KRTAP4-8A0A0G2JLE6 195 aa5.78□□□□□ -1.48
SMARCA4-206ENST00000538456 H0YAA0 97 aa5.78□□□□□ -1.48
SMARCA4-206ENST00000538456 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
SMARCA4-206ENST00000538456 PLAC4Q8WY50 150 aa5.78□□□□□ -1.48
SMARCA4-206ENST00000538456 KRTAP4-8Q9BYQ9 185 aa5.78□□□□□ -1.48
SMARCA4-206ENST00000538456 LCE3BQ5TA77 95 aa5.77□□□□□ -1.49
SMARCA4-206ENST00000538456 ADM2Q7Z4H4 148 aa5.77□□□□□ -1.49
SMARCA4-206ENST00000538456 SPTSSBQ8NFR3 76 aa5.75□□□□□ -1.49
SMARCA4-206ENST00000538456 V9GYY9 64 aa5.69□□□□□ -1.5
SMARCA4-206ENST00000538456 DSTQ03001 7570 aaKnown RBP5.68□□□□□ -1.5
SMARCA4-206ENST00000538456 Q1T7F1 81 aa5.68□□□□□ -1.5
SMARCA4-206ENST00000538456 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
SMARCA4-206ENST00000538456 R4GN34 69 aa5.65□□□□□ -1.5
SMARCA4-206ENST00000538456 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
SMARCA4-206ENST00000538456 M0QZ58 72 aa5.6□□□□□ -1.51
SMARCA4-206ENST00000538456 P0C880 135 aa5.58□□□□□ -1.52
SMARCA4-206ENST00000538456 PRR15LQ9BU68 103 aa5.58□□□□□ -1.52
SMARCA4-206ENST00000538456 A0A1B0GU69 56 aa5.57□□□□□ -1.52
SMARCA4-206ENST00000538456 LINC01554Q52M75 96 aa5.57□□□□□ -1.52
SMARCA4-206ENST00000538456 SEC61GP60059 68 aa5.56□□□□□ -1.52
SMARCA4-206ENST00000538456 KRTAP10-12P60413 245 aa5.56□□□□□ -1.52
SMARCA4-206ENST00000538456 PSPHP1O15172 72 aa5.54□□□□□ -1.52
SMARCA4-206ENST00000538456 KRTAP4-9Q9BYQ8 210 aa5.5□□□□□ -1.53
SMARCA4-206ENST00000538456 A0A1B0GU33 70 aa5.42□□□□□ -1.54
SMARCA4-206ENST00000538456 UQCR11O14957 56 aa5.41□□□□□ -1.54
SMARCA4-206ENST00000538456 A6NED7 52 aa5.4□□□□□ -1.54
SMARCA4-206ENST00000538456 MIR22HGQ0VDD5 57 aa5.33□□□□□ -1.56
SMARCA4-206ENST00000538456 LCE5AQ5TCM9 118 aa5.33□□□□□ -1.56
SMARCA4-206ENST00000538456 SPATA8Q6RVD6 105 aa5.33□□□□□ -1.56
SMARCA4-206ENST00000538456 H3BS24 57 aa5.32□□□□□ -1.56
SMARCA4-206ENST00000538456 CDC42SE1Q9NRR8 79 aa5.32□□□□□ -1.56
SMARCA4-206ENST00000538456 KRTAP13-4Q3LI77 160 aa5.31□□□□□ -1.56
SMARCA4-206ENST00000538456 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
SMARCA4-206ENST00000538456 HMCN1Q96RW7 5635 aa5.3□□□□□ -1.56
SMARCA4-206ENST00000538456 BRK1Q8WUW1 75 aa5.29□□□□□ -1.56
SMARCA4-206ENST00000538456 KRTAP19-7Q3SYF9 63 aa5.26□□□□□ -1.57
SMARCA4-206ENST00000538456 KRTAP19-3Q7Z4W3 81 aa5.26□□□□□ -1.57
SMARCA4-206ENST00000538456 AHNAK2Q8IVF2 5795 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms