RNA–Protein interactions for RNA: ENST00000538451.1

LDHA-216, Transcript of lactate dehydrogenase A, humanhuman

TSL 2

Gene LDHA, Length 1,345 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-216ENST00000538451 Q5W150 140 aa5.38□□□□□ -1.55
LDHA-216ENST00000538451 C20orf197Q8N268 126 aa5.38□□□□□ -1.55
LDHA-216ENST00000538451 PCOTHQ58A44 107 aa5.37□□□□□ -1.55
LDHA-216ENST00000538451 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
LDHA-216ENST00000538451 NDUFC1O43677 76 aa5.36□□□□□ -1.55
LDHA-216ENST00000538451 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
LDHA-216ENST00000538451 KLKP1Q107X0 134 aa5.35□□□□□ -1.55
LDHA-216ENST00000538451 A0A0U1RQV1 116 aa5.34□□□□□ -1.55
LDHA-216ENST00000538451 SPINK7P58062 85 aa5.33□□□□□ -1.56
LDHA-216ENST00000538451 CYP4F30PQ9H0H9 118 aa5.33□□□□□ -1.56
LDHA-216ENST00000538451 SNURFQ9Y675 71 aa5.32□□□□□ -1.56
LDHA-216ENST00000538451 CCDC179H3BU77 68 aa5.29□□□□□ -1.56
LDHA-216ENST00000538451 RNF213Q63HN8 5207 aa5.29□□□□□ -1.56
LDHA-216ENST00000538451 RBM12B-AS1Q9P1G2 102 aa5.27□□□□□ -1.57
LDHA-216ENST00000538451 SPANXA2-OT1Q8N9U9 137 aa5.24□□□□□ -1.57
LDHA-216ENST00000538451 HRES1P13985 223 aa5.23□□□□□ -1.57
LDHA-216ENST00000538451 H7BZZ5 65 aa5.23□□□□□ -1.57
LDHA-216ENST00000538451 ATP5EP56381 51 aaPredicted RBP5.23□□□□□ -1.57
LDHA-216ENST00000538451 A8MUN3 132 aa5.22□□□□□ -1.57
LDHA-216ENST00000538451 TMEM258P61165 79 aa5.22□□□□□ -1.57
LDHA-216ENST00000538451 FAM236DA0A1B0GTK5 79 aa5.21□□□□□ -1.58
LDHA-216ENST00000538451 FAM236CP0DP71 79 aa5.21□□□□□ -1.58
LDHA-216ENST00000538451 MUC2Q02817 5179 aa5.2□□□□□ -1.58
LDHA-216ENST00000538451 C4orf26Q17RF5 130 aa5.2□□□□□ -1.58
LDHA-216ENST00000538451 COX6B2Q6YFQ2 88 aa5.19□□□□□ -1.58
LDHA-216ENST00000538451 ACYP2P14621 99 aa5.18□□□□□ -1.58
LDHA-216ENST00000538451 PRAC1Q96KF2 57 aa5.15□□□□□ -1.59
LDHA-216ENST00000538451 CYSTM1Q9H1C7 97 aa5.15□□□□□ -1.59
LDHA-216ENST00000538451 MUC17Q685J3 4493 aa5.15□□□□□ -1.59
LDHA-216ENST00000538451 DMAC1Q96GE9 116 aa5.14□□□□□ -1.59
LDHA-216ENST00000538451 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
LDHA-216ENST00000538451 CHKB-CPT1BH3BT56 60 aa5.11□□□□□ -1.59
LDHA-216ENST00000538451 KRTAP4-1Q9BYQ7 146 aa5.11□□□□□ -1.59
LDHA-216ENST00000538451 SPTSSBQ8NFR3 76 aa5.09□□□□□ -1.59
LDHA-216ENST00000538451 S4R3F8 94 aa5.05□□□□□ -1.6
LDHA-216ENST00000538451 SERP1Q9Y6X1 66 aa5.04□□□□□ -1.6
LDHA-216ENST00000538451 COA5Q86WW8 74 aa5.03□□□□□ -1.6
LDHA-216ENST00000538451 SEC61GP60059 68 aa5□□□□□ -1.61
LDHA-216ENST00000538451 FAT4Q6V0I7 4981 aa5□□□□□ -1.61
LDHA-216ENST00000538451 CSAG1Q6PB30 78 aa4.99□□□□□ -1.61
LDHA-216ENST00000538451 RPS28P62857 69 aaKnown RBP4.98□□□□□ -1.61
LDHA-216ENST00000538451 LCA10Q71F78 164 aa4.97□□□□□ -1.61
LDHA-216ENST00000538451 M0R2T5 61 aa4.96□□□□□ -1.62
LDHA-216ENST00000538451 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
LDHA-216ENST00000538451 V9GYY9 64 aa4.92□□□□□ -1.62
LDHA-216ENST00000538451 SMIM26A0A096LP01 95 aa4.91□□□□□ -1.62
LDHA-216ENST00000538451 MT1HP80294 61 aa4.91□□□□□ -1.62
LDHA-216ENST00000538451 PRR15LQ9BU68 103 aa4.88□□□□□ -1.63
LDHA-216ENST00000538451 H0YAA0 97 aa4.85□□□□□ -1.63
LDHA-216ENST00000538451 A0A1B0GU69 56 aa4.84□□□□□ -1.63
LDHA-216ENST00000538451 LINC01558Q9Y6Z2 57 aa4.82□□□□□ -1.64
LDHA-216ENST00000538451 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
LDHA-216ENST00000538451 Q1T7F1 81 aa4.81□□□□□ -1.64
LDHA-216ENST00000538451 ADM2Q7Z4H4 148 aa4.78□□□□□ -1.64
LDHA-216ENST00000538451 FLGP20930 4061 aaPredicted RBP4.77□□□□□ -1.65
LDHA-216ENST00000538451 CRIPTQ9P021 101 aa4.73□□□□□ -1.65
LDHA-216ENST00000538451 A0A1B0GU33 70 aa4.71□□□□□ -1.66
LDHA-216ENST00000538451 PSPHP1O15172 72 aa4.71□□□□□ -1.66
LDHA-216ENST00000538451 R4GN34 69 aa4.7□□□□□ -1.66
LDHA-216ENST00000538451 M0QZ58 72 aa4.69□□□□□ -1.66
LDHA-216ENST00000538451 UQCR11O14957 56 aa4.69□□□□□ -1.66
LDHA-216ENST00000538451 KRTAP10-10P60014 251 aa4.69□□□□□ -1.66
LDHA-216ENST00000538451 CRCT1Q9UGL9 99 aa4.69□□□□□ -1.66
LDHA-216ENST00000538451 P0C880 135 aa4.67□□□□□ -1.66
LDHA-216ENST00000538451 MT2AP02795 61 aa4.64□□□□□ -1.67
LDHA-216ENST00000538451 Q5VV11 94 aa4.64□□□□□ -1.67
LDHA-216ENST00000538451 A6NED7 52 aa4.63□□□□□ -1.67
LDHA-216ENST00000538451 FSIP2Q5CZC0 6907 aa4.6□□□□□ -1.67
LDHA-216ENST00000538451 MT1FP04733 61 aa4.59□□□□□ -1.67
LDHA-216ENST00000538451 MIR22HGQ0VDD5 57 aa4.59□□□□□ -1.67
LDHA-216ENST00000538451 NDUFAF8A1L188 74 aa4.57□□□□□ -1.68
LDHA-216ENST00000538451 LINC01554Q52M75 96 aa4.55□□□□□ -1.68
LDHA-216ENST00000538451 SPATA8Q6RVD6 105 aa4.55□□□□□ -1.68
LDHA-216ENST00000538451 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
LDHA-216ENST00000538451 K7ERS5 55 aa4.53□□□□□ -1.68
LDHA-216ENST00000538451 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
LDHA-216ENST00000538451 A0A0D9SG42 100 aa4.5□□□□□ -1.69
LDHA-216ENST00000538451 A6NN06 94 aa4.49□□□□□ -1.69
LDHA-216ENST00000538451 KRTAP13-4Q3LI77 160 aa4.49□□□□□ -1.69
LDHA-216ENST00000538451 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
LDHA-216ENST00000538451 BRK1Q8WUW1 75 aa4.46□□□□□ -1.69
LDHA-216ENST00000538451 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
LDHA-216ENST00000538451 SPINT4Q6UDR6 99 aa4.46□□□□□ -1.7
LDHA-216ENST00000538451 A8MU10 97 aa4.44□□□□□ -1.7
LDHA-216ENST00000538451 KRTAP19-8Q3LI54 63 aa4.43□□□□□ -1.7
LDHA-216ENST00000538451 CAMK2N1Q7Z7J9 78 aa4.4□□□□□ -1.71
LDHA-216ENST00000538451 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
LDHA-216ENST00000538451 USH2AO75445 5202 aa4.38□□□□□ -1.71
LDHA-216ENST00000538451 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
LDHA-216ENST00000538451 PRO2289Q9P1D8 64 aa4.33□□□□□ -1.72
LDHA-216ENST00000538451 MT1BP07438 61 aa4.32□□□□□ -1.72
LDHA-216ENST00000538451 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
LDHA-216ENST00000538451 PRO0628Q9UI54 55 aa4.32□□□□□ -1.72
LDHA-216ENST00000538451 SSPOA2VEC9 5147 aa4.32□□□□□ -1.72
LDHA-216ENST00000538451 PMAIP1Q13794 54 aa4.25□□□□□ -1.73
LDHA-216ENST00000538451 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
LDHA-216ENST00000538451 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.73
LDHA-216ENST00000538451 ROMO1P60602 79 aa4.21□□□□□ -1.74
LDHA-216ENST00000538451 MT3P25713 68 aa4.18□□□□□ -1.74
LDHA-216ENST00000538451 KRTAP10-5P60370 271 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms