RNA–Protein interactions for RNA: ENST00000537328.5

TMEM258-204, Transcript of transmembrane protein 258, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM258, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-204ENST00000537328 RNF213Q63HN8 5207 aa8.49□□□□□ -1.05
TMEM258-204ENST00000537328 Q5VV11 94 aa8.43□□□□□ -1.06
TMEM258-204ENST00000537328 SEC61BP60468 96 aaKnown RBP8.42□□□□□ -1.06
TMEM258-204ENST00000537328 KRTAP3-1Q9BYR8 98 aa8.42□□□□□ -1.06
TMEM258-204ENST00000537328 LPAP08519 4548 aa8.4□□□□□ -1.06
TMEM258-204ENST00000537328 A0A1B0GU69 56 aa8.38□□□□□ -1.07
TMEM258-204ENST00000537328 SEC61GP60059 68 aa8.37□□□□□ -1.07
TMEM258-204ENST00000537328 RBM12B-AS1Q9P1G2 102 aa8.35□□□□□ -1.07
TMEM258-204ENST00000537328 BRK1Q8WUW1 75 aa8.34□□□□□ -1.07
TMEM258-204ENST00000537328 A6NED7 52 aa8.31□□□□□ -1.08
TMEM258-204ENST00000537328 PRO0628Q9UI54 55 aa8.31□□□□□ -1.08
TMEM258-204ENST00000537328 H1FX-AS1Q4G0G2 97 aa8.28□□□□□ -1.08
TMEM258-204ENST00000537328 LCE2AQ5TA79 106 aaPredicted RBP8.25□□□□□ -1.09
TMEM258-204ENST00000537328 S4R3F8 94 aa8.25□□□□□ -1.09
TMEM258-204ENST00000537328 CDC42SE1Q9NRR8 79 aa8.2□□□□□ -1.1
TMEM258-204ENST00000537328 UQCR11O14957 56 aa8.19□□□□□ -1.1
TMEM258-204ENST00000537328 LCA10Q71F78 164 aa8.17□□□□□ -1.1
TMEM258-204ENST00000537328 MUC2Q02817 5179 aa8.14□□□□□ -1.11
TMEM258-204ENST00000537328 MUC17Q685J3 4493 aa8.13□□□□□ -1.11
TMEM258-204ENST00000537328 MIR22HGQ0VDD5 57 aa8.09□□□□□ -1.11
TMEM258-204ENST00000537328 LCE2CQ5TA81 110 aa8.09□□□□□ -1.11
TMEM258-204ENST00000537328 CSAG1Q6PB30 78 aa8.09□□□□□ -1.11
TMEM258-204ENST00000537328 SPATA8Q6RVD6 105 aa8.09□□□□□ -1.11
TMEM258-204ENST00000537328 SVIPQ8NHG7 77 aa8.07□□□□□ -1.12
TMEM258-204ENST00000537328 A0A1B0GU33 70 aa8.06□□□□□ -1.12
TMEM258-204ENST00000537328 KRTAP4-1Q9BYQ7 146 aa7.99□□□□□ -1.13
TMEM258-204ENST00000537328 KRTAP9-2Q9BYQ4 174 aa7.96□□□□□ -1.14
TMEM258-204ENST00000537328 A8MU10 97 aa7.95□□□□□ -1.14
TMEM258-204ENST00000537328 H0YAA0 97 aa7.93□□□□□ -1.14
TMEM258-204ENST00000537328 FAT4Q6V0I7 4981 aa7.93□□□□□ -1.14
TMEM258-204ENST00000537328 PMAIP1Q13794 54 aa7.92□□□□□ -1.14
TMEM258-204ENST00000537328 LORP23490 312 aaPredicted RBP7.9□□□□□ -1.14
TMEM258-204ENST00000537328 KRTAP10-6P60371 365 aaPredicted RBP7.9□□□□□ -1.14
TMEM258-204ENST00000537328 ADM2Q7Z4H4 148 aa7.88□□□□□ -1.15
TMEM258-204ENST00000537328 KRTAP19-2Q3LHN2 52 aa7.83□□□□□ -1.16
TMEM258-204ENST00000537328 K7ERS5 55 aa7.81□□□□□ -1.16
TMEM258-204ENST00000537328 A6NN06 94 aa7.8□□□□□ -1.16
TMEM258-204ENST00000537328 P0C880 135 aa7.79□□□□□ -1.16
TMEM258-204ENST00000537328 M0QZ58 72 aa7.78□□□□□ -1.16
TMEM258-204ENST00000537328 KRTAP9-6A0A140TA67 174 aa7.74□□□□□ -1.17
TMEM258-204ENST00000537328 KRTAP13-4Q3LI77 160 aa7.66□□□□□ -1.18
TMEM258-204ENST00000537328 KTN1-AS1Q86SY8 53 aa7.66□□□□□ -1.18
TMEM258-204ENST00000537328 FLGP20930 4061 aaPredicted RBP7.64□□□□□ -1.19
TMEM258-204ENST00000537328 R4GN34 69 aa7.63□□□□□ -1.19
TMEM258-204ENST00000537328 A0A0D9SG42 100 aa7.61□□□□□ -1.19
TMEM258-204ENST00000537328 MT1HP80294 61 aa7.59□□□□□ -1.19
TMEM258-204ENST00000537328 CRIPTQ9P021 101 aa7.57□□□□□ -1.2
TMEM258-204ENST00000537328 M0R2T5 61 aa7.56□□□□□ -1.2
TMEM258-204ENST00000537328 LOC100996750A0A140TA64 210 aa7.54□□□□□ -1.2
TMEM258-204ENST00000537328 KRTAP4-6Q9BYQ5 205 aa7.54□□□□□ -1.2
TMEM258-204ENST00000537328 CRCT1Q9UGL9 99 aa7.5□□□□□ -1.21
TMEM258-204ENST00000537328 SPINT4Q6UDR6 99 aa7.47□□□□□ -1.21
TMEM258-204ENST00000537328 KRTAP12-1P59990 96 aa7.46□□□□□ -1.22
TMEM258-204ENST00000537328 LINC01554Q52M75 96 aa7.43□□□□□ -1.22
TMEM258-204ENST00000537328 KRTAP12-2P59991 146 aa7.42□□□□□ -1.22
TMEM258-204ENST00000537328 ROMO1P60602 79 aa7.42□□□□□ -1.22
TMEM258-204ENST00000537328 FSIP2Q5CZC0 6907 aa7.4□□□□□ -1.22
TMEM258-204ENST00000537328 PRAC1Q96KF2 57 aa7.28□□□□□ -1.24
TMEM258-204ENST00000537328 KRTAP10-10P60014 251 aa7.23□□□□□ -1.25
TMEM258-204ENST00000537328 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
TMEM258-204ENST00000537328 MT2AP02795 61 aa7.2□□□□□ -1.26
TMEM258-204ENST00000537328 CAMK2N1Q7Z7J9 78 aa7.19□□□□□ -1.26
TMEM258-204ENST00000537328 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
TMEM258-204ENST00000537328 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
TMEM258-204ENST00000537328 MT1FP04733 61 aa7.14□□□□□ -1.27
TMEM258-204ENST00000537328 PLAC4Q8WY50 150 aa7.14□□□□□ -1.27
TMEM258-204ENST00000537328 KRTAP19-1Q8IUB9 90 aa7.11□□□□□ -1.27
TMEM258-204ENST00000537328 C10orf95Q9H7T3 257 aa7.02□□□□□ -1.29
TMEM258-204ENST00000537328 KRTAP19-8Q3LI54 63 aa7.01□□□□□ -1.29
TMEM258-204ENST00000537328 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.98□□□□□ -1.29
TMEM258-204ENST00000537328 USH2AO75445 5202 aa6.97□□□□□ -1.29
TMEM258-204ENST00000537328 KRTAP9-7A8MTY7 169 aa6.95□□□□□ -1.3
TMEM258-204ENST00000537328 KRTAP9-3Q9BYQ3 159 aa6.94□□□□□ -1.3
TMEM258-204ENST00000537328 KRTAP4-8Q9BYQ9 185 aa6.94□□□□□ -1.3
TMEM258-204ENST00000537328 TNP1P09430 55 aa6.9□□□□□ -1.3
TMEM258-204ENST00000537328 SSPOA2VEC9 5147 aa6.9□□□□□ -1.31
TMEM258-204ENST00000537328 PP632Q6XCG6 107 aa6.88□□□□□ -1.31
TMEM258-204ENST00000537328 KRTAP23-1A1A580 65 aa6.82□□□□□ -1.32
TMEM258-204ENST00000537328 MT1BP07438 61 aa6.82□□□□□ -1.32
TMEM258-204ENST00000537328 FCGBPQ9Y6R7 5405 aaPredicted RBP6.81□□□□□ -1.32
TMEM258-204ENST00000537328 PRO2289Q9P1D8 64 aa6.73□□□□□ -1.33
TMEM258-204ENST00000537328 KRTAP19-6Q3LI70 58 aa6.71□□□□□ -1.34
TMEM258-204ENST00000537328 KRTAP10-5P60370 271 aa6.65□□□□□ -1.34
TMEM258-204ENST00000537328 MT1XP80297 61 aa6.65□□□□□ -1.34
TMEM258-204ENST00000537328 KRTAP4-12Q9BQ66 201 aa6.64□□□□□ -1.35
TMEM258-204ENST00000537328 MACF1Q9UPN3 7388 aaKnown RBP6.62□□□□□ -1.35
TMEM258-204ENST00000537328 LCE3BQ5TA77 95 aa6.62□□□□□ -1.35
TMEM258-204ENST00000537328 SYNE2Q8WXH0 6885 aaKnown RBP6.54□□□□□ -1.36
TMEM258-204ENST00000537328 KRTAP6-3Q3LI67 103 aa6.47□□□□□ -1.37
TMEM258-204ENST00000537328 KRTAP9-9Q9BYP9 154 aa6.47□□□□□ -1.37
TMEM258-204ENST00000537328 KRTAP9-4Q9BYQ2 154 aa6.47□□□□□ -1.37
TMEM258-204ENST00000537328 KRTAP10-12P60413 245 aa6.45□□□□□ -1.38
TMEM258-204ENST00000537328 LCE3AQ5TA76 89 aa6.44□□□□□ -1.38
TMEM258-204ENST00000537328 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
TMEM258-204ENST00000537328 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
TMEM258-204ENST00000537328 KRTAP4-8A0A0G2JLE6 195 aa6.36□□□□□ -1.39
TMEM258-204ENST00000537328 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
TMEM258-204ENST00000537328 KRTAP12-3P60328 96 aa6.24□□□□□ -1.41
TMEM258-204ENST00000537328 LCE1DQ5T752 114 aa6.19□□□□□ -1.42
TMEM258-204ENST00000537328 NEBP20929 6669 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms