RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 WFDC13Q8IUB5 93 aa6.25□□□□□ -1.41
CHD4-203ENST00000535717 CASC2Q6XLA1 102 aa6.24□□□□□ -1.41
CHD4-203ENST00000535717 LINC00208Q96KT6 92 aa6.23□□□□□ -1.41
CHD4-203ENST00000535717 A8MUN3 132 aa6.22□□□□□ -1.41
CHD4-203ENST00000535717 PSPHP1O15172 72 aa6.21□□□□□ -1.42
CHD4-203ENST00000535717 A6NN06 94 aa6.2□□□□□ -1.42
CHD4-203ENST00000535717 CDC42SE1Q9NRR8 79 aa6.2□□□□□ -1.42
CHD4-203ENST00000535717 SPINK7P58062 85 aa6.16□□□□□ -1.42
CHD4-203ENST00000535717 Q5W150 140 aa6.16□□□□□ -1.42
CHD4-203ENST00000535717 COX6B2Q6YFQ2 88 aa6.16□□□□□ -1.42
CHD4-203ENST00000535717 C7orf65Q6ZTY9 151 aa6.16□□□□□ -1.42
CHD4-203ENST00000535717 RBM12B-AS1Q9P1G2 102 aa6.16□□□□□ -1.42
CHD4-203ENST00000535717 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
CHD4-203ENST00000535717 CHKB-CPT1BH3BT56 60 aa6.15□□□□□ -1.42
CHD4-203ENST00000535717 HRES1P13985 223 aa6.15□□□□□ -1.42
CHD4-203ENST00000535717 FLGP20930 4061 aaPredicted RBP6.14□□□□□ -1.43
CHD4-203ENST00000535717 H0Y9P7 68 aa6.14□□□□□ -1.43
CHD4-203ENST00000535717 MT1HP80294 61 aa6.13□□□□□ -1.43
CHD4-203ENST00000535717 PRR15LQ9BU68 103 aa6.13□□□□□ -1.43
CHD4-203ENST00000535717 TP53AIP1Q9HCN2 124 aa6.13□□□□□ -1.43
CHD4-203ENST00000535717 LCA10Q71F78 164 aa6.11□□□□□ -1.43
CHD4-203ENST00000535717 COA5Q86WW8 74 aa6.1□□□□□ -1.43
CHD4-203ENST00000535717 A6NED7 52 aa6.08□□□□□ -1.44
CHD4-203ENST00000535717 IGKV2D-30A0A075B6S6 120 aa6.07□□□□□ -1.44
CHD4-203ENST00000535717 IGKV2-30P06310 120 aa6.07□□□□□ -1.44
CHD4-203ENST00000535717 A8MU10 97 aa6.04□□□□□ -1.44
CHD4-203ENST00000535717 KRTAP4-8Q9BYQ9 185 aa6.03□□□□□ -1.44
CHD4-203ENST00000535717 M0R2T5 61 aa6.02□□□□□ -1.45
CHD4-203ENST00000535717 SPTSSBQ8NFR3 76 aa6.01□□□□□ -1.45
CHD4-203ENST00000535717 KRTAP10-6P60371 365 aaPredicted RBP5.97□□□□□ -1.45
CHD4-203ENST00000535717 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.92□□□□□ -1.46
CHD4-203ENST00000535717 KRTAP9-2Q9BYQ4 174 aa5.92□□□□□ -1.46
CHD4-203ENST00000535717 H1FX-AS1Q4G0G2 97 aa5.91□□□□□ -1.46
CHD4-203ENST00000535717 KRTAP9-6A0A140TA67 174 aa5.89□□□□□ -1.47
CHD4-203ENST00000535717 KRTAP3-1Q9BYR8 98 aa5.88□□□□□ -1.47
CHD4-203ENST00000535717 LINC01554Q52M75 96 aa5.85□□□□□ -1.47
CHD4-203ENST00000535717 KRTAP9-8Q9BYQ0 159 aa5.85□□□□□ -1.47
CHD4-203ENST00000535717 SPATA8Q6RVD6 105 aa5.84□□□□□ -1.47
CHD4-203ENST00000535717 ACYP2P14621 99 aa5.82□□□□□ -1.48
CHD4-203ENST00000535717 DMAC1Q96GE9 116 aa5.82□□□□□ -1.48
CHD4-203ENST00000535717 MT2AP02795 61 aa5.79□□□□□ -1.48
CHD4-203ENST00000535717 KRTAP4-12Q9BQ66 201 aa5.79□□□□□ -1.48
CHD4-203ENST00000535717 S4R3F8 94 aa5.76□□□□□ -1.49
CHD4-203ENST00000535717 LCE3BQ5TA77 95 aa5.75□□□□□ -1.49
CHD4-203ENST00000535717 MT1FP04733 61 aa5.74□□□□□ -1.49
CHD4-203ENST00000535717 A0A1B0GU69 56 aa5.73□□□□□ -1.49
CHD4-203ENST00000535717 UQCR11O14957 56 aa5.73□□□□□ -1.49
CHD4-203ENST00000535717 KRTAP10-10P60014 251 aa5.71□□□□□ -1.5
CHD4-203ENST00000535717 PRAC1Q96KF2 57 aa5.71□□□□□ -1.5
CHD4-203ENST00000535717 MIR22HGQ0VDD5 57 aa5.7□□□□□ -1.5
CHD4-203ENST00000535717 KRTAP19-1Q8IUB9 90 aa5.7□□□□□ -1.5
CHD4-203ENST00000535717 CSAG1Q6PB30 78 aa5.69□□□□□ -1.5
CHD4-203ENST00000535717 H3BS24 57 aa5.66□□□□□ -1.5
CHD4-203ENST00000535717 KRTAP9-3Q9BYQ3 159 aa5.65□□□□□ -1.5
CHD4-203ENST00000535717 ADM2Q7Z4H4 148 aa5.64□□□□□ -1.51
CHD4-203ENST00000535717 KRTAP9-9Q9BYP9 154 aa5.63□□□□□ -1.51
CHD4-203ENST00000535717 KRTAP9-4Q9BYQ2 154 aa5.63□□□□□ -1.51
CHD4-203ENST00000535717 USH2AO75445 5202 aa5.59□□□□□ -1.52
CHD4-203ENST00000535717 FSIP2Q5CZC0 6907 aa5.56□□□□□ -1.52
CHD4-203ENST00000535717 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
CHD4-203ENST00000535717 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
CHD4-203ENST00000535717 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
CHD4-203ENST00000535717 H0YAA0 97 aa5.5□□□□□ -1.53
CHD4-203ENST00000535717 ROMO1P60602 79 aa5.47□□□□□ -1.53
CHD4-203ENST00000535717 SSPOA2VEC9 5147 aa5.46□□□□□ -1.54
CHD4-203ENST00000535717 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
CHD4-203ENST00000535717 CRIPTQ9P021 101 aa5.42□□□□□ -1.54
CHD4-203ENST00000535717 P0C880 135 aa5.38□□□□□ -1.55
CHD4-203ENST00000535717 LCE1DQ5T752 114 aa5.38□□□□□ -1.55
CHD4-203ENST00000535717 KRTAP19-8Q3LI54 63 aa5.36□□□□□ -1.55
CHD4-203ENST00000535717 MT1BP07438 61 aa5.34□□□□□ -1.55
CHD4-203ENST00000535717 KRTAP4-7Q9BYR0 210 aa5.34□□□□□ -1.55
CHD4-203ENST00000535717 FCGBPQ9Y6R7 5405 aaPredicted RBP5.33□□□□□ -1.56
CHD4-203ENST00000535717 K7ERS5 55 aa5.33□□□□□ -1.56
CHD4-203ENST00000535717 A0A1B0GU33 70 aa5.32□□□□□ -1.56
CHD4-203ENST00000535717 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
CHD4-203ENST00000535717 R4GN34 69 aa5.28□□□□□ -1.56
CHD4-203ENST00000535717 M0QZ58 72 aa5.26□□□□□ -1.57
CHD4-203ENST00000535717 LCE4AQ5TA78 99 aa5.24□□□□□ -1.57
CHD4-203ENST00000535717 KRTAP4-9Q9BYQ8 210 aa5.22□□□□□ -1.57
CHD4-203ENST00000535717 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
CHD4-203ENST00000535717 KRTAP10-5P60370 271 aa5.16□□□□□ -1.58
CHD4-203ENST00000535717 PLAC4Q8WY50 150 aa5.14□□□□□ -1.59
CHD4-203ENST00000535717 KRTAP13-4Q3LI77 160 aa5.13□□□□□ -1.59
CHD4-203ENST00000535717 KRTAP9-7A8MTY7 169 aa5.12□□□□□ -1.59
CHD4-203ENST00000535717 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
CHD4-203ENST00000535717 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
CHD4-203ENST00000535717 MT1XP80297 61 aa5.07□□□□□ -1.6
CHD4-203ENST00000535717 SPINT4Q6UDR6 99 aa5.05□□□□□ -1.6
CHD4-203ENST00000535717 KRTAP4-11Q9BYQ6 195 aa5.04□□□□□ -1.6
CHD4-203ENST00000535717 PRO2289Q9P1D8 64 aa5.03□□□□□ -1.6
CHD4-203ENST00000535717 MACF1Q9UPN3 7388 aaKnown RBP5.02□□□□□ -1.61
CHD4-203ENST00000535717 A0A0D9SG42 100 aa5□□□□□ -1.61
CHD4-203ENST00000535717 LCE5AQ5TCM9 118 aa4.98□□□□□ -1.61
CHD4-203ENST00000535717 NDUFAF8A1L188 74 aa4.95□□□□□ -1.62
CHD4-203ENST00000535717 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
CHD4-203ENST00000535717 KRTAP12-1P59990 96 aa4.9□□□□□ -1.63
CHD4-203ENST00000535717 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.63
CHD4-203ENST00000535717 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
CHD4-203ENST00000535717 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms