RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 NDUFC1O43677 76 aa9.28□□□□□ -0.92
CHEK1-215ENST00000533778 KRTAP3-3Q9BYR6 98 aa9.28□□□□□ -0.92
CHEK1-215ENST00000533778 KRTAP9-6A0A140TA67 174 aa9.26□□□□□ -0.93
CHEK1-215ENST00000533778 SERP2Q8N6R1 65 aa9.24□□□□□ -0.93
CHEK1-215ENST00000533778 CRCT1Q9UGL9 99 aa9.24□□□□□ -0.93
CHEK1-215ENST00000533778 DMAC1Q96GE9 116 aa9.22□□□□□ -0.93
CHEK1-215ENST00000533778 SNURFQ9Y675 71 aa9.16□□□□□ -0.94
CHEK1-215ENST00000533778 LCE2BO14633 110 aa9.15□□□□□ -0.94
CHEK1-215ENST00000533778 C20orf197Q8N268 126 aa9.14□□□□□ -0.95
CHEK1-215ENST00000533778 ACYP2P14621 99 aa9.11□□□□□ -0.95
CHEK1-215ENST00000533778 USH2AO75445 5202 aa9.1□□□□□ -0.95
CHEK1-215ENST00000533778 H0YAA0 97 aa9.08□□□□□ -0.96
CHEK1-215ENST00000533778 COX7CP15954 63 aa9.04□□□□□ -0.96
CHEK1-215ENST00000533778 SPANXA2-OT1Q8N9U9 137 aa9.04□□□□□ -0.96
CHEK1-215ENST00000533778 CRIPTQ9P021 101 aa9.01□□□□□ -0.97
CHEK1-215ENST00000533778 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
CHEK1-215ENST00000533778 ADM2Q7Z4H4 148 aa8.97□□□□□ -0.97
CHEK1-215ENST00000533778 KRTAP19-1Q8IUB9 90 aa8.97□□□□□ -0.97
CHEK1-215ENST00000533778 CHKB-CPT1BH3BT56 60 aa8.95□□□□□ -0.98
CHEK1-215ENST00000533778 SPRR2GQ9BYE4 73 aa8.95□□□□□ -0.98
CHEK1-215ENST00000533778 SSPOA2VEC9 5147 aa8.93□□□□□ -0.98
CHEK1-215ENST00000533778 ANAPC13Q9BS18 74 aa8.92□□□□□ -0.98
CHEK1-215ENST00000533778 Q5VV11 94 aa8.84□□□□□ -0.99
CHEK1-215ENST00000533778 KRTAP19-8Q3LI54 63 aa8.83□□□□□ -1
CHEK1-215ENST00000533778 KRTAP19-6Q3LI70 58 aa8.82□□□□□ -1
CHEK1-215ENST00000533778 H7BZZ5 65 aa8.8□□□□□ -1
CHEK1-215ENST00000533778 P0C880 135 aa8.77□□□□□ -1.01
CHEK1-215ENST00000533778 CYSTM1Q9H1C7 97 aa8.76□□□□□ -1.01
CHEK1-215ENST00000533778 KRTAP3-2Q9BYR7 98 aa8.75□□□□□ -1.01
CHEK1-215ENST00000533778 MT1BP07438 61 aa8.74□□□□□ -1.01
CHEK1-215ENST00000533778 R4GN34 69 aa8.74□□□□□ -1.01
CHEK1-215ENST00000533778 COA5Q86WW8 74 aa8.73□□□□□ -1.01
CHEK1-215ENST00000533778 FCGBPQ9Y6R7 5405 aaPredicted RBP8.7□□□□□ -1.02
CHEK1-215ENST00000533778 CCDC179H3BU77 68 aa8.67□□□□□ -1.02
CHEK1-215ENST00000533778 M0QZ58 72 aa8.67□□□□□ -1.02
CHEK1-215ENST00000533778 A6NN06 94 aa8.58□□□□□ -1.04
CHEK1-215ENST00000533778 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.57□□□□□ -1.04
CHEK1-215ENST00000533778 ATP5EP56381 51 aaPredicted RBP8.55□□□□□ -1.04
CHEK1-215ENST00000533778 SEC61GP60059 68 aa8.55□□□□□ -1.04
CHEK1-215ENST00000533778 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
CHEK1-215ENST00000533778 LINC01554Q52M75 96 aa8.51□□□□□ -1.05
CHEK1-215ENST00000533778 KRTAP10-5P60370 271 aa8.5□□□□□ -1.05
CHEK1-215ENST00000533778 SERP1Q9Y6X1 66 aa8.5□□□□□ -1.05
CHEK1-215ENST00000533778 MACF1Q9UPN3 7388 aaKnown RBP8.44□□□□□ -1.06
CHEK1-215ENST00000533778 TMEM258P61165 79 aa8.43□□□□□ -1.06
CHEK1-215ENST00000533778 PRO2289Q9P1D8 64 aa8.42□□□□□ -1.06
CHEK1-215ENST00000533778 KRTAP9-7A8MTY7 169 aa8.36□□□□□ -1.07
CHEK1-215ENST00000533778 SYNE2Q8WXH0 6885 aaKnown RBP8.33□□□□□ -1.08
CHEK1-215ENST00000533778 A0A1B0GU69 56 aa8.33□□□□□ -1.08
CHEK1-215ENST00000533778 A0A1B0GU33 70 aa8.31□□□□□ -1.08
CHEK1-215ENST00000533778 KRTAP13-4Q3LI77 160 aa8.31□□□□□ -1.08
CHEK1-215ENST00000533778 MT1XP80297 61 aa8.29□□□□□ -1.08
CHEK1-215ENST00000533778 PRR15LQ9BU68 103 aa8.22□□□□□ -1.09
CHEK1-215ENST00000533778 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
CHEK1-215ENST00000533778 KRTAP6-3Q3LI67 103 aa8.16□□□□□ -1.1
CHEK1-215ENST00000533778 LINC01558Q9Y6Z2 57 aa8.16□□□□□ -1.1
CHEK1-215ENST00000533778 A0A0D9SG42 100 aa8.15□□□□□ -1.1
CHEK1-215ENST00000533778 CAMK2N1Q7Z7J9 78 aa8.11□□□□□ -1.11
CHEK1-215ENST00000533778 SMIM26A0A096LP01 95 aa8.1□□□□□ -1.11
CHEK1-215ENST00000533778 KRTAP12-2P59991 146 aa8.07□□□□□ -1.12
CHEK1-215ENST00000533778 SPINT4Q6UDR6 99 aa8.04□□□□□ -1.12
CHEK1-215ENST00000533778 PCP4P48539 62 aa8.01□□□□□ -1.13
CHEK1-215ENST00000533778 KRTAP12-1P59990 96 aa7.98□□□□□ -1.13
CHEK1-215ENST00000533778 V9GYY9 64 aa7.97□□□□□ -1.13
CHEK1-215ENST00000533778 A8MU10 97 aa7.94□□□□□ -1.14
CHEK1-215ENST00000533778 UQCR11O14957 56 aa7.93□□□□□ -1.14
CHEK1-215ENST00000533778 KRTAP5-9P26371 169 aa7.92□□□□□ -1.14
CHEK1-215ENST00000533778 KRTAP10-7P60409 375 aaPredicted RBP7.91□□□□□ -1.14
CHEK1-215ENST00000533778 KRTAP10-12P60413 245 aa7.9□□□□□ -1.14
CHEK1-215ENST00000533778 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
CHEK1-215ENST00000533778 Q1T7F1 81 aa7.87□□□□□ -1.15
CHEK1-215ENST00000533778 KMT2DO14686 5537 aa7.83□□□□□ -1.16
CHEK1-215ENST00000533778 RPS28P62857 69 aaKnown RBP7.81□□□□□ -1.16
CHEK1-215ENST00000533778 NEBP20929 6669 aa7.8□□□□□ -1.16
CHEK1-215ENST00000533778 KRTAP4-8A0A0G2JLE6 195 aa7.8□□□□□ -1.16
CHEK1-215ENST00000533778 KRTAP4-8Q9BYQ9 185 aa7.8□□□□□ -1.16
CHEK1-215ENST00000533778 PSPHP1O15172 72 aa7.78□□□□□ -1.16
CHEK1-215ENST00000533778 MIR22HGQ0VDD5 57 aa7.77□□□□□ -1.17
CHEK1-215ENST00000533778 SPRR2FQ96RM1 72 aa7.77□□□□□ -1.17
CHEK1-215ENST00000533778 MUC12Q9UKN1 5478 aa7.75□□□□□ -1.17
CHEK1-215ENST00000533778 MDN1Q9NU22 5596 aa7.62□□□□□ -1.19
CHEK1-215ENST00000533778 K7ERS5 55 aa7.62□□□□□ -1.19
CHEK1-215ENST00000533778 C10orf95Q9H7T3 257 aa7.59□□□□□ -1.19
CHEK1-215ENST00000533778 A6NED7 52 aa7.58□□□□□ -1.2
CHEK1-215ENST00000533778 SPRR2EP22531 72 aa7.58□□□□□ -1.2
CHEK1-215ENST00000533778 SPRR2BP35325 72 aa7.58□□□□□ -1.2
CHEK1-215ENST00000533778 SPRR2AP35326 72 aa7.58□□□□□ -1.2
CHEK1-215ENST00000533778 TNP1P09430 55 aa7.57□□□□□ -1.2
CHEK1-215ENST00000533778 LCE1AQ5T7P2 110 aa7.51□□□□□ -1.21
CHEK1-215ENST00000533778 KRTAP19-7Q3SYF9 63 aa7.4□□□□□ -1.22
CHEK1-215ENST00000533778 KRTAP20-1Q3LI63 56 aa7.39□□□□□ -1.23
CHEK1-215ENST00000533778 SVIPQ8NHG7 77 aa7.38□□□□□ -1.23
CHEK1-215ENST00000533778 MT1EP04732 61 aa7.34□□□□□ -1.23
CHEK1-215ENST00000533778 SPRR2DP22532 72 aa7.33□□□□□ -1.24
CHEK1-215ENST00000533778 KRTAP25-1Q3LHN0 102 aa7.33□□□□□ -1.24
CHEK1-215ENST00000533778 KRTAP19-5Q3LI72 72 aa7.33□□□□□ -1.24
CHEK1-215ENST00000533778 LCE3AQ5TA76 89 aa7.33□□□□□ -1.24
CHEK1-215ENST00000533778 KRTAP2-3P0C7H8 128 aa7.31□□□□□ -1.24
CHEK1-215ENST00000533778 KRTAP2-4Q9BYR9 128 aa7.31□□□□□ -1.24
CHEK1-215ENST00000533778 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms