RNA–Protein interactions for RNA: ENST00000533487.1

VPS51-211, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 3

Gene VPS51, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-211ENST00000533487 CRCT1Q9UGL9 99 aa9.83□□□□□ -0.84
VPS51-211ENST00000533487 KRTAP3-3Q9BYR6 98 aa9.79□□□□□ -0.84
VPS51-211ENST00000533487 NDUFC1O43677 76 aa9.78□□□□□ -0.84
VPS51-211ENST00000533487 DMAC1Q96GE9 116 aa9.73□□□□□ -0.85
VPS51-211ENST00000533487 SERP2Q8N6R1 65 aa9.71□□□□□ -0.86
VPS51-211ENST00000533487 LCE2BO14633 110 aa9.69□□□□□ -0.86
VPS51-211ENST00000533487 FSIP2Q5CZC0 6907 aa9.66□□□□□ -0.86
VPS51-211ENST00000533487 H0YAA0 97 aa9.65□□□□□ -0.86
VPS51-211ENST00000533487 ACYP2P14621 99 aa9.6□□□□□ -0.87
VPS51-211ENST00000533487 CRIPTQ9P021 101 aa9.58□□□□□ -0.88
VPS51-211ENST00000533487 SNURFQ9Y675 71 aa9.57□□□□□ -0.88
VPS51-211ENST00000533487 C20orf197Q8N268 126 aa9.56□□□□□ -0.88
VPS51-211ENST00000533487 SPANXA2-OT1Q8N9U9 137 aa9.55□□□□□ -0.88
VPS51-211ENST00000533487 USH2AO75445 5202 aa9.51□□□□□ -0.89
VPS51-211ENST00000533487 SPRR2GQ9BYE4 73 aa9.51□□□□□ -0.89
VPS51-211ENST00000533487 KRTAP19-1Q8IUB9 90 aa9.5□□□□□ -0.89
VPS51-211ENST00000533487 COX7CP15954 63 aa9.49□□□□□ -0.89
VPS51-211ENST00000533487 SPTSSBQ8NFR3 76 aa9.48□□□□□ -0.89
VPS51-211ENST00000533487 ADM2Q7Z4H4 148 aa9.42□□□□□ -0.9
VPS51-211ENST00000533487 KRTAP19-6Q3LI70 58 aa9.4□□□□□ -0.9
VPS51-211ENST00000533487 CHKB-CPT1BH3BT56 60 aa9.38□□□□□ -0.91
VPS51-211ENST00000533487 KRTAP19-8Q3LI54 63 aa9.38□□□□□ -0.91
VPS51-211ENST00000533487 Q5VV11 94 aa9.36□□□□□ -0.91
VPS51-211ENST00000533487 SSPOA2VEC9 5147 aa9.36□□□□□ -0.91
VPS51-211ENST00000533487 ANAPC13Q9BS18 74 aa9.31□□□□□ -0.92
VPS51-211ENST00000533487 MT1BP07438 61 aa9.26□□□□□ -0.93
VPS51-211ENST00000533487 H7BZZ5 65 aa9.24□□□□□ -0.93
VPS51-211ENST00000533487 P0C880 135 aa9.22□□□□□ -0.93
VPS51-211ENST00000533487 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
VPS51-211ENST00000533487 R4GN34 69 aa9.22□□□□□ -0.93
VPS51-211ENST00000533487 COA5Q86WW8 74 aa9.17□□□□□ -0.94
VPS51-211ENST00000533487 FCGBPQ9Y6R7 5405 aaPredicted RBP9.14□□□□□ -0.95
VPS51-211ENST00000533487 CYSTM1Q9H1C7 97 aa9.14□□□□□ -0.95
VPS51-211ENST00000533487 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.12□□□□□ -0.95
VPS51-211ENST00000533487 M0QZ58 72 aa9.12□□□□□ -0.95
VPS51-211ENST00000533487 A6NN06 94 aa9.08□□□□□ -0.96
VPS51-211ENST00000533487 CCDC179H3BU77 68 aa9.04□□□□□ -0.96
VPS51-211ENST00000533487 KRTAP10-5P60370 271 aa9.04□□□□□ -0.96
VPS51-211ENST00000533487 ATP5EP56381 51 aaPredicted RBP9.03□□□□□ -0.96
VPS51-211ENST00000533487 PLAC4Q8WY50 150 aa9.02□□□□□ -0.97
VPS51-211ENST00000533487 SEC61GP60059 68 aa8.98□□□□□ -0.97
VPS51-211ENST00000533487 SERP1Q9Y6X1 66 aa8.94□□□□□ -0.98
VPS51-211ENST00000533487 PRO2289Q9P1D8 64 aa8.93□□□□□ -0.98
VPS51-211ENST00000533487 KRTAP9-7A8MTY7 169 aa8.91□□□□□ -0.98
VPS51-211ENST00000533487 LINC01554Q52M75 96 aa8.91□□□□□ -0.98
VPS51-211ENST00000533487 TMEM258P61165 79 aa8.86□□□□□ -0.99
VPS51-211ENST00000533487 MT1XP80297 61 aa8.78□□□□□ -1
VPS51-211ENST00000533487 MACF1Q9UPN3 7388 aaKnown RBP8.77□□□□□ -1.01
VPS51-211ENST00000533487 A0A1B0GU33 70 aa8.73□□□□□ -1.01
VPS51-211ENST00000533487 A0A1B0GU69 56 aa8.73□□□□□ -1.01
VPS51-211ENST00000533487 KRTAP13-4Q3LI77 160 aa8.73□□□□□ -1.01
VPS51-211ENST00000533487 KRTAP6-3Q3LI67 103 aa8.71□□□□□ -1.02
VPS51-211ENST00000533487 PRR15LQ9BU68 103 aa8.65□□□□□ -1.02
VPS51-211ENST00000533487 KRTAP12-2P59991 146 aa8.61□□□□□ -1.03
VPS51-211ENST00000533487 LINC01558Q9Y6Z2 57 aa8.58□□□□□ -1.04
VPS51-211ENST00000533487 SYNE2Q8WXH0 6885 aaKnown RBP8.56□□□□□ -1.04
VPS51-211ENST00000533487 SPATA8Q6RVD6 105 aa8.56□□□□□ -1.04
VPS51-211ENST00000533487 SMIM26A0A096LP01 95 aa8.54□□□□□ -1.04
VPS51-211ENST00000533487 CAMK2N1Q7Z7J9 78 aa8.52□□□□□ -1.05
VPS51-211ENST00000533487 A0A0D9SG42 100 aa8.5□□□□□ -1.05
VPS51-211ENST00000533487 KRTAP5-9P26371 169 aa8.46□□□□□ -1.06
VPS51-211ENST00000533487 KRTAP12-1P59990 96 aa8.4□□□□□ -1.06
VPS51-211ENST00000533487 SPINT4Q6UDR6 99 aa8.4□□□□□ -1.06
VPS51-211ENST00000533487 KRTAP10-12P60413 245 aa8.39□□□□□ -1.07
VPS51-211ENST00000533487 V9GYY9 64 aa8.39□□□□□ -1.07
VPS51-211ENST00000533487 UQCR11O14957 56 aa8.34□□□□□ -1.07
VPS51-211ENST00000533487 KRTAP10-7P60409 375 aaPredicted RBP8.34□□□□□ -1.07
VPS51-211ENST00000533487 KRTAP8-1Q8IUC2 63 aa8.34□□□□□ -1.07
VPS51-211ENST00000533487 PCP4P48539 62 aa8.31□□□□□ -1.08
VPS51-211ENST00000533487 A8MU10 97 aa8.29□□□□□ -1.08
VPS51-211ENST00000533487 Q1T7F1 81 aa8.27□□□□□ -1.09
VPS51-211ENST00000533487 SPRR2FQ96RM1 72 aa8.23□□□□□ -1.09
VPS51-211ENST00000533487 KRTAP4-8A0A0G2JLE6 195 aa8.22□□□□□ -1.09
VPS51-211ENST00000533487 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
VPS51-211ENST00000533487 RPS28P62857 69 aaKnown RBP8.19□□□□□ -1.1
VPS51-211ENST00000533487 KMT2DO14686 5537 aa8.18□□□□□ -1.1
VPS51-211ENST00000533487 MIR22HGQ0VDD5 57 aa8.13□□□□□ -1.11
VPS51-211ENST00000533487 PSPHP1O15172 72 aa8.1□□□□□ -1.11
VPS51-211ENST00000533487 MUC12Q9UKN1 5478 aa8.1□□□□□ -1.11
VPS51-211ENST00000533487 NEBP20929 6669 aa8.05□□□□□ -1.12
VPS51-211ENST00000533487 SPRR2EP22531 72 aa8.02□□□□□ -1.13
VPS51-211ENST00000533487 SPRR2BP35325 72 aa8.02□□□□□ -1.13
VPS51-211ENST00000533487 SPRR2AP35326 72 aa8.02□□□□□ -1.13
VPS51-211ENST00000533487 K7ERS5 55 aa8.01□□□□□ -1.13
VPS51-211ENST00000533487 TNP1P09430 55 aa7.99□□□□□ -1.13
VPS51-211ENST00000533487 C10orf95Q9H7T3 257 aa7.98□□□□□ -1.13
VPS51-211ENST00000533487 LCE1AQ5T7P2 110 aa7.97□□□□□ -1.13
VPS51-211ENST00000533487 MDN1Q9NU22 5596 aa7.92□□□□□ -1.14
VPS51-211ENST00000533487 A6NED7 52 aa7.91□□□□□ -1.14
VPS51-211ENST00000533487 KRTAP20-1Q3LI63 56 aa7.87□□□□□ -1.15
VPS51-211ENST00000533487 KRTAP19-7Q3SYF9 63 aa7.84□□□□□ -1.15
VPS51-211ENST00000533487 KRTAP2-3P0C7H8 128 aa7.79□□□□□ -1.16
VPS51-211ENST00000533487 KRTAP2-4Q9BYR9 128 aa7.79□□□□□ -1.16
VPS51-211ENST00000533487 MT1EP04732 61 aa7.76□□□□□ -1.17
VPS51-211ENST00000533487 SPRR2DP22532 72 aa7.76□□□□□ -1.17
VPS51-211ENST00000533487 KRTAP25-1Q3LHN0 102 aa7.74□□□□□ -1.17
VPS51-211ENST00000533487 KRTAP19-5Q3LI72 72 aa7.71□□□□□ -1.18
VPS51-211ENST00000533487 LCE3AQ5TA76 89 aa7.71□□□□□ -1.18
VPS51-211ENST00000533487 KRTAP19-3Q7Z4W3 81 aa7.66□□□□□ -1.18
VPS51-211ENST00000533487 CDC42SE1Q9NRR8 79 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms